RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 UNC13BO14795 1591 aa39.67■■■■□ 3.94
CCM2-201ENST00000258781 RPRD2Q5VT52 1461 aaKnown RBP39.67■■■■□ 3.94
CCM2-201ENST00000258781 COL17A1Q9UMD9 1497 aaPredicted RBP39.66■■■■□ 3.94
CCM2-201ENST00000258781 ZMYM4Q5VZL5 1548 aa39.65■■■■□ 3.94
CCM2-201ENST00000258781 TRHP20396 242 aaPredicted RBP39.64■■■■□ 3.94
CCM2-201ENST00000258781 FOXD1Q16676 465 aa39.64■■■■□ 3.94
CCM2-201ENST00000258781 DIP2CQ9Y2E4 1556 aa39.61■■■■□ 3.93
CCM2-201ENST00000258781 NUP155O75694 1391 aa39.61■■■■□ 3.93
CCM2-201ENST00000258781 DHX29Q7Z478 1369 aaKnown RBP39.6■■■■□ 3.93
CCM2-201ENST00000258781 MAGI2Q86UL8 1455 aa39.58■■■■□ 3.93
CCM2-201ENST00000258781 EIF2AK4Q9P2K8 1649 aaKnown RBP39.58■■■■□ 3.93
CCM2-201ENST00000258781 YEATS2Q9ULM3 1422 aa39.58■■■■□ 3.93
CCM2-201ENST00000258781 A2MP01023 1474 aa39.58■■■■□ 3.93
CCM2-201ENST00000258781 DEPDC5O75140 1603 aa39.55■■■■□ 3.92
CCM2-201ENST00000258781 FAM135AQ9P2D6 1515 aa39.53■■■■□ 3.92
CCM2-201ENST00000258781 PKD2Q13563 968 aa39.51■■■■□ 3.92
CCM2-201ENST00000258781 IQGAP3Q86VI3 1631 aa39.51■■■■□ 3.92
CCM2-201ENST00000258781 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.48■■■■□ 3.91
CCM2-201ENST00000258781 MROH1Q8NDA8 1641 aa39.46■■■■□ 3.91
CCM2-201ENST00000258781 KIF3BO15066 747 aa39.45■■■■□ 3.91
CCM2-201ENST00000258781 BCORL1Q5H9F3 1711 aa39.43■■■■□ 3.9
CCM2-201ENST00000258781 L3MBTL2Q969R5 705 aa39.43■■■■□ 3.9
CCM2-201ENST00000258781 PRDM15P57071 1507 aaPredicted RBP39.41■■■■□ 3.9
CCM2-201ENST00000258781 RNF17Q9BXT8 1623 aaKnown RBP39.41■■■■□ 3.9
CCM2-201ENST00000258781 VWDEQ8N2E2 1590 aa39.37■■■■□ 3.89
CCM2-201ENST00000258781 ARHGEF40Q8TER5 1519 aa39.35■■■■□ 3.89
CCM2-201ENST00000258781 MIER1Q8N108 512 aa39.34■■■■□ 3.89
CCM2-201ENST00000258781 ATP10AO60312 1499 aa39.33■■■■□ 3.89
CCM2-201ENST00000258781 SIGLEC1Q9BZZ2 1709 aa39.3■■■■□ 3.88
CCM2-201ENST00000258781 REREQ9P2R6 1566 aa39.29■■■■□ 3.88
CCM2-201ENST00000258781 TET3O43151 1660 aa39.25■■■■□ 3.87
CCM2-201ENST00000258781 CEP152O94986 1710 aa39.24■■■■□ 3.87
CCM2-201ENST00000258781 E9PCH4 1651 aa39.24■■■■□ 3.87
CCM2-201ENST00000258781 KANK1Q14678 1352 aa39.24■■■■□ 3.87
CCM2-201ENST00000258781 GGT6Q6P531 493 aa39.21■■■■□ 3.87
CCM2-201ENST00000258781 AGLP35573 1532 aa39.17■■■■□ 3.86
CCM2-201ENST00000258781 LMTK2Q8IWU2 1503 aa39.16■■■■□ 3.86
CCM2-201ENST00000258781 PLA2R1Q13018 1463 aa39.14■■■■□ 3.86
CCM2-201ENST00000258781 NBPF8Q3BBV2 869 aa39.13■■■■□ 3.86
CCM2-201ENST00000258781 EFCAB6Q5THR3 1501 aa39.13■■■■□ 3.85
CCM2-201ENST00000258781 ABCC3O15438 1527 aa39.11■■■■□ 3.85
CCM2-201ENST00000258781 HIRIP3Q9BW71 556 aaPredicted RBP39.1■■■■□ 3.85
CCM2-201ENST00000258781 CCDC144AA2RUR9 1427 aa39.07■■■■□ 3.85
CCM2-201ENST00000258781 EIF4G2P78344 907 aaKnown RBP eCLIP39.07■■■■□ 3.85
CCM2-201ENST00000258781 UHRF1BP1Q6BDS2 1440 aa39.07■■■■□ 3.85
CCM2-201ENST00000258781 SPHKAPQ2M3C7 1700 aa39.06■■■■□ 3.84
CCM2-201ENST00000258781 ZC3H13Q5T200 1668 aaKnown RBP39.05■■■■□ 3.84
CCM2-201ENST00000258781 HSPA5P11021 654 aaKnown RBP39.05■■■■□ 3.84
CCM2-201ENST00000258781 CAMSAP1Q5T5Y3 1602 aa39.04■■■■□ 3.84
CCM2-201ENST00000258781 WASHC2CQ9Y4E1 1318 aa39.03■■■■□ 3.84
CCM2-201ENST00000258781 DDX10Q13206 875 aaKnown RBP39■■■■□ 3.83
CCM2-201ENST00000258781 TRPM2O94759 1503 aa38.98■■■■□ 3.83
CCM2-201ENST00000258781 PTPRTO14522 1441 aa38.98■■■■□ 3.83
CCM2-201ENST00000258781 NPATQ14207 1427 aa38.97■■■■□ 3.83
CCM2-201ENST00000258781 CFAP65Q6ZU64 1925 aaKnown RBP38.96■■■■□ 3.83
CCM2-201ENST00000258781 RALGAPBQ86X10 1494 aa38.94■■■■□ 3.82
CCM2-201ENST00000258781 SPATA31E1Q6ZUB1 1445 aa38.93■■■■□ 3.82
CCM2-201ENST00000258781 MLECQ14165 292 aa38.9■■■■□ 3.82
CCM2-201ENST00000258781 POLR1AO95602 1720 aaPredicted RBP38.89■■■■□ 3.82
CCM2-201ENST00000258781 CLTCL1P53675 1640 aa38.89■■■■□ 3.82
CCM2-201ENST00000258781 CLTCQ00610 1675 aaKnown RBP38.89■■■■□ 3.82
CCM2-201ENST00000258781 CENPBP07199 599 aaPredicted RBP38.86■■■■□ 3.81
CCM2-201ENST00000258781 ARHGAP31Q2M1Z3 1444 aa38.85■■■■□ 3.81
CCM2-201ENST00000258781 UGGT1Q9NYU2 1555 aa38.85■■■■□ 3.81
CCM2-201ENST00000258781 ARID4BQ4LE39 1312 aaPredicted RBP38.84■■■■□ 3.81
CCM2-201ENST00000258781 PPP6R1Q9UPN7 881 aa38.81■■■■□ 3.8
CCM2-201ENST00000258781 ZNF326Q5BKZ1 582 aaKnown RBP38.81■■■■□ 3.8
CCM2-201ENST00000258781 DCAF11Q8TEB1 546 aa38.81■■■■□ 3.8
CCM2-201ENST00000258781 WASHC2AQ641Q2 1341 aa38.8■■■■□ 3.8
CCM2-201ENST00000258781 NOS1P29475 1434 aa38.76■■■■□ 3.8
CCM2-201ENST00000258781 PREX1Q8TCU6 1659 aa38.76■■■■□ 3.8
CCM2-201ENST00000258781 PRAG1Q86YV5 1406 aa38.76■■■■□ 3.79
CCM2-201ENST00000258781 TRPM1Q7Z4N2 1603 aa38.76■■■■□ 3.79
CCM2-201ENST00000258781 USP47Q96K76 1375 aa38.75■■■■□ 3.79
CCM2-201ENST00000258781 CNTLNQ9NXG0 1405 aa38.74■■■■□ 3.79
CCM2-201ENST00000258781 SYNMO15061 1565 aa38.74■■■■□ 3.79
CCM2-201ENST00000258781 KDM2AQ9Y2K7 1162 aa38.73■■■■□ 3.79
CCM2-201ENST00000258781 CCDC7Q96M83 1385 aa38.72■■■■□ 3.79
CCM2-201ENST00000258781 KIF1BO60333 1816 aa38.69■■■■□ 3.78
CCM2-201ENST00000258781 RGL3Q3MIN7 710 aa38.69■■■■□ 3.78
CCM2-201ENST00000258781 NEURL4Q96JN8 1562 aa38.68■■■■□ 3.78
CCM2-201ENST00000258781 YTHDC1Q96MU7 727 aaKnown RBP38.68■■■■□ 3.78
CCM2-201ENST00000258781 PIK3C2BO00750 1634 aa38.67■■■■□ 3.78
CCM2-201ENST00000258781 MROH2AA6NES4 1674 aa38.66■■■■□ 3.78
CCM2-201ENST00000258781 LAMC1P11047 1609 aa38.65■■■■□ 3.78
CCM2-201ENST00000258781 ANP32CO43423 234 aa38.64■■■■□ 3.78
CCM2-201ENST00000258781 ERVK-7P63135 1459 aa38.63■■■■□ 3.77
CCM2-201ENST00000258781 FBXO31Q5XUX0 539 aaPredicted RBP38.62■■■■□ 3.77
CCM2-201ENST00000258781 CARD11Q9BXL7 1154 aa38.62■■■■□ 3.77
CCM2-201ENST00000258781 C11orf95C9JLR9 678 aaPredicted RBP38.62■■■■□ 3.77
CCM2-201ENST00000258781 ESF1Q9H501 851 aaKnown RBP38.6■■■■□ 3.77
CCM2-201ENST00000258781 FER1L4A9Z1Z3 1794 aa38.6■■■■□ 3.77
CCM2-201ENST00000258781 ROCK2O75116 1388 aaKnown RBP38.6■■■■□ 3.77
CCM2-201ENST00000258781 ZMYM3Q14202 1370 aa38.59■■■■□ 3.77
CCM2-201ENST00000258781 GPRASP1Q5JY77 1395 aa38.58■■■■□ 3.77
CCM2-201ENST00000258781 ADGRB3O60242 1522 aa38.58■■■■□ 3.77
CCM2-201ENST00000258781 SPATA31D1Q6ZQQ2 1576 aa38.58■■■■□ 3.77
CCM2-201ENST00000258781 KIF7Q2M1P5 1343 aa38.56■■■■□ 3.76
CCM2-201ENST00000258781 STAC3Q96MF2 364 aa38.55■■■■□ 3.76
CCM2-201ENST00000258781 CCER2I3L3R5 266 aa38.54■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms