RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 SOX12O15370 315 aa12.29□□□□□ -0.44
CKAP2-201ENST00000258607 CCER2I3L3R5 266 aa12.29□□□□□ -0.44
CKAP2-201ENST00000258607 FAM69CQ0P6D2 419 aa12.29□□□□□ -0.44
CKAP2-201ENST00000258607 PZPP20742 1482 aa12.28□□□□□ -0.44
CKAP2-201ENST00000258607 SKAP1Q86WV1 359 aa12.28□□□□□ -0.44
CKAP2-201ENST00000258607 CDCA7LQ96GN5 454 aa12.27□□□□□ -0.45
CKAP2-201ENST00000258607 CHD1O14646 1710 aa12.27□□□□□ -0.45
CKAP2-201ENST00000258607 NPM2Q86SE8 214 aaKnown RBP12.27□□□□□ -0.45
CKAP2-201ENST00000258607 TSHZ2Q9NRE2 1034 aa12.26□□□□□ -0.45
CKAP2-201ENST00000258607 RPRD2Q5VT52 1461 aaKnown RBP12.26□□□□□ -0.45
CKAP2-201ENST00000258607 TCOF1Q13428 1488 aaKnown RBP12.25□□□□□ -0.45
CKAP2-201ENST00000258607 TRHP20396 242 aaPredicted RBP12.25□□□□□ -0.45
CKAP2-201ENST00000258607 KNSTRNQ9Y448 316 aa12.25□□□□□ -0.45
CKAP2-201ENST00000258607 RRP7AQ9Y3A4 280 aaKnown RBP12.24□□□□□ -0.45
CKAP2-201ENST00000258607 ROCK1Q13464 1354 aa12.24□□□□□ -0.45
CKAP2-201ENST00000258607 CNTLNQ9NXG0 1405 aa12.23□□□□□ -0.45
CKAP2-201ENST00000258607 FBXO31Q5XUX0 539 aaPredicted RBP12.23□□□□□ -0.45
CKAP2-201ENST00000258607 CCDC141Q6ZP82 1450 aa12.22□□□□□ -0.45
CKAP2-201ENST00000258607 ADGRF5Q8IZF2 1346 aa12.22□□□□□ -0.45
CKAP2-201ENST00000258607 TMF1P82094 1093 aa12.22□□□□□ -0.45
CKAP2-201ENST00000258607 FBLN1P23142 703 aa12.21□□□□□ -0.45
CKAP2-201ENST00000258607 CCDC136Q96JN2 1154 aa12.21□□□□□ -0.46
CKAP2-201ENST00000258607 DNMT1P26358 1616 aaKnown RBP12.2□□□□□ -0.46
CKAP2-201ENST00000258607 ESF1Q9H501 851 aaKnown RBP12.2□□□□□ -0.46
CKAP2-201ENST00000258607 TTC37Q6PGP7 1564 aa12.2□□□□□ -0.46
CKAP2-201ENST00000258607 WDR43Q15061 677 aaKnown RBP eCLIP12.19□□□□□ -0.46
CKAP2-201ENST00000258607 DISP3Q9P2K9 1392 aa12.19□□□□□ -0.46
CKAP2-201ENST00000258607 ARHGEF12Q9NZN5 1544 aa12.19□□□□□ -0.46
CKAP2-201ENST00000258607 MINK1Q8N4C8 1332 aaPredicted RBP12.19□□□□□ -0.46
CKAP2-201ENST00000258607 SRPK2P78362 688 aaKnown RBP12.18□□□□□ -0.46
CKAP2-201ENST00000258607 SLC12A5Q9H2X9 1139 aa12.18□□□□□ -0.46
CKAP2-201ENST00000258607 ABCC10Q5T3U5 1492 aa12.17□□□□□ -0.46
CKAP2-201ENST00000258607 RSPH4AQ5TD94 716 aa12.17□□□□□ -0.46
CKAP2-201ENST00000258607 TEX14Q8IWB6 1497 aa12.17□□□□□ -0.46
CKAP2-201ENST00000258607 CABP2Q9NPB3 220 aa12.17□□□□□ -0.46
CKAP2-201ENST00000258607 MBD5Q9P267 1494 aa12.16□□□□□ -0.46
CKAP2-201ENST00000258607 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.16□□□□□ -0.46
CKAP2-201ENST00000258607 KANK1Q14678 1352 aa12.16□□□□□ -0.46
CKAP2-201ENST00000258607 ASXL2Q76L83 1435 aa12.16□□□□□ -0.46
CKAP2-201ENST00000258607 ERICH6Q7L0X2 663 aa12.16□□□□□ -0.46
CKAP2-201ENST00000258607 FANCAO15360 1455 aa12.15□□□□□ -0.46
CKAP2-201ENST00000258607 ABCA8O94911 1581 aa12.15□□□□□ -0.46
CKAP2-201ENST00000258607 RBM33Q96EV2 1170 aaKnown RBP12.15□□□□□ -0.46
CKAP2-201ENST00000258607 BCL2L13Q9BXK5 485 aa12.15□□□□□ -0.46
CKAP2-201ENST00000258607 KDM5BQ9UGL1 1544 aa12.15□□□□□ -0.46
CKAP2-201ENST00000258607 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.15□□□□□ -0.46
CKAP2-201ENST00000258607 POGKQ9P215 609 aa12.15□□□□□ -0.47
CKAP2-201ENST00000258607 ADAMTS8Q9UP79 889 aa12.15□□□□□ -0.47
CKAP2-201ENST00000258607 SLC24A1O60721 1099 aa12.14□□□□□ -0.47
CKAP2-201ENST00000258607 CDC42BPAQ5VT25 1732 aa12.14□□□□□ -0.47
CKAP2-201ENST00000258607 SAMD9LQ8IVG5 1584 aa12.14□□□□□ -0.47
CKAP2-201ENST00000258607 ADGRL1O94910 1474 aa12.13□□□□□ -0.47
CKAP2-201ENST00000258607 U2SURPO15042 1029 aaKnown RBP12.13□□□□□ -0.47
CKAP2-201ENST00000258607 UGGT1Q9NYU2 1555 aa12.13□□□□□ -0.47
CKAP2-201ENST00000258607 FAM135AQ9P2D6 1515 aa12.13□□□□□ -0.47
CKAP2-201ENST00000258607 KTN1Q86UP2 1357 aaKnown RBP12.13□□□□□ -0.47
CKAP2-201ENST00000258607 RBM19Q9Y4C8 960 aaKnown RBP12.13□□□□□ -0.47
CKAP2-201ENST00000258607 CEBPAP49715 358 aaPredicted RBP12.12□□□□□ -0.47
CKAP2-201ENST00000258607 PNISRQ8TF01 805 aaKnown RBP12.12□□□□□ -0.47
CKAP2-201ENST00000258607 ZBTB7CA1YPR0 619 aa12.12□□□□□ -0.47
CKAP2-201ENST00000258607 EXOC6Q8TAG9 804 aa12.11□□□□□ -0.47
CKAP2-201ENST00000258607 FRAT1Q92837 279 aaPredicted RBP12.11□□□□□ -0.47
CKAP2-201ENST00000258607 CD109Q6YHK3 1445 aa12.11□□□□□ -0.47
CKAP2-201ENST00000258607 PLCH2O75038 1416 aa12.11□□□□□ -0.47
CKAP2-201ENST00000258607 APAF1O14727 1248 aa12.1□□□□□ -0.47
CKAP2-201ENST00000258607 CANXP27824 592 aaKnown RBP12.1□□□□□ -0.47
CKAP2-201ENST00000258607 GCC2Q8IWJ2 1684 aa12.1□□□□□ -0.47
CKAP2-201ENST00000258607 GGNBP2Q9H3C7 697 aa12.1□□□□□ -0.47
CKAP2-201ENST00000258607 TESK2Q96S53 571 aa12.09□□□□□ -0.47
CKAP2-201ENST00000258607 LAS1LQ9Y4W2 734 aaKnown RBP12.09□□□□□ -0.47
CKAP2-201ENST00000258607 ABCC2Q92887 1545 aa12.09□□□□□ -0.47
CKAP2-201ENST00000258607 IDI1Q13907 227 aa12.09□□□□□ -0.47
CKAP2-201ENST00000258607 NLRP13Q86W25 1043 aa12.09□□□□□ -0.47
CKAP2-201ENST00000258607 MYBBP1AQ9BQG0 1328 aaKnown RBP12.08□□□□□ -0.48
CKAP2-201ENST00000258607 ITSN2Q9NZM3 1697 aa12.08□□□□□ -0.48
CKAP2-201ENST00000258607 MORC1Q86VD1 984 aa12.08□□□□□ -0.48
CKAP2-201ENST00000258607 WAPLQ7Z5K2 1190 aa12.08□□□□□ -0.48
CKAP2-201ENST00000258607 CLUAP1Q96AJ1 413 aa12.08□□□□□ -0.48
CKAP2-201ENST00000258607 ERBINQ96RT1 1412 aa12.08□□□□□ -0.48
CKAP2-201ENST00000258607 PLA2R1Q13018 1463 aa12.07□□□□□ -0.48
CKAP2-201ENST00000258607 TCERG1O14776 1098 aaKnown RBP12.07□□□□□ -0.48
CKAP2-201ENST00000258607 NBR1Q14596 966 aa12.07□□□□□ -0.48
CKAP2-201ENST00000258607 NCKAP5LQ9HCH0 1330 aa12.07□□□□□ -0.48
CKAP2-201ENST00000258607 C14orf37Q86TY3 774 aa12.06□□□□□ -0.48
CKAP2-201ENST00000258607 RGS3P49796 1198 aa12.06□□□□□ -0.48
CKAP2-201ENST00000258607 DHX29Q7Z478 1369 aaKnown RBP12.06□□□□□ -0.48
CKAP2-201ENST00000258607 A2MP01023 1474 aa12.06□□□□□ -0.48
CKAP2-201ENST00000258607 NUDCQ9Y266 331 aa12.05□□□□□ -0.48
CKAP2-201ENST00000258607 ZBED9Q6R2W3 1325 aa12.05□□□□□ -0.48
CKAP2-201ENST00000258607 CDC42BPBQ9Y5S2 1711 aa12.05□□□□□ -0.48
CKAP2-201ENST00000258607 RCAN3Q9UKA8 241 aa12.05□□□□□ -0.48
CKAP2-201ENST00000258607 C20orf194Q5TEA3 1177 aa12.05□□□□□ -0.48
CKAP2-201ENST00000258607 SPATA31E1Q6ZUB1 1445 aa12.04□□□□□ -0.48
CKAP2-201ENST00000258607 U2AF1L5P0DN76 240 aaPredicted RBP12.04□□□□□ -0.48
CKAP2-201ENST00000258607 U2AF1Q01081 240 aaKnown RBP eCLIP12.04□□□□□ -0.48
CKAP2-201ENST00000258607 WDR7Q9Y4E6 1490 aa12.04□□□□□ -0.48
CKAP2-201ENST00000258607 PPP4R2Q9NY27 417 aa12.04□□□□□ -0.48
CKAP2-201ENST00000258607 BCORL1Q5H9F3 1711 aa12.03□□□□□ -0.48
CKAP2-201ENST00000258607 PPP2R1AP30153 589 aa12.03□□□□□ -0.48
CKAP2-201ENST00000258607 PRAG1Q86YV5 1406 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms