RNA–Protein interactions for RNA: ENST00000258387.5

PAX3-201, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-201ENST00000258387 CEP170BQ9Y4F5 1589 aaPredicted RBP29.52■■■□□ 2.32
PAX3-201ENST00000258387 TNRQ92752 1358 aa29.5■■■□□ 2.31
PAX3-201ENST00000258387 PLA2R1Q13018 1463 aa29.48■■■□□ 2.31
PAX3-201ENST00000258387 ARHGEF5Q12774 1597 aa29.47■■■□□ 2.31
PAX3-201ENST00000258387 A2ML1A8K2U0 1454 aa29.47■■■□□ 2.31
PAX3-201ENST00000258387 TCOF1Q13428 1488 aaKnown RBP29.45■■■□□ 2.31
PAX3-201ENST00000258387 ZNF142P52746 1687 aaPredicted RBP29.44■■■□□ 2.3
PAX3-201ENST00000258387 KDM5DQ9BY66 1539 aa29.44■■■□□ 2.3
PAX3-201ENST00000258387 APLP2Q06481 763 aa29.43■■■□□ 2.3
PAX3-201ENST00000258387 PZPP20742 1482 aa29.42■■■□□ 2.3
PAX3-201ENST00000258387 MAP3K1Q13233 1512 aa29.41■■■□□ 2.3
PAX3-201ENST00000258387 MYOM3Q5VTT5 1437 aa29.41■■■□□ 2.3
PAX3-201ENST00000258387 MIA2Q96PC5 1412 aa29.39■■■□□ 2.3
PAX3-201ENST00000258387 DNMT1P26358 1616 aaKnown RBP29.39■■■□□ 2.3
PAX3-201ENST00000258387 UBAP1LF5GYI3 381 aa29.38■■■□□ 2.29
PAX3-201ENST00000258387 IQSEC2Q5JU85 1478 aa29.37■■■□□ 2.29
PAX3-201ENST00000258387 THEMISQ8N1K5 641 aaPredicted RBP29.37■■■□□ 2.29
PAX3-201ENST00000258387 ANKLE2Q86XL3 938 aa29.36■■■□□ 2.29
PAX3-201ENST00000258387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.36■■■□□ 2.29
PAX3-201ENST00000258387 DISP3Q9P2K9 1392 aa29.35■■■□□ 2.29
PAX3-201ENST00000258387 FAM135AQ9P2D6 1515 aa29.35■■■□□ 2.29
PAX3-201ENST00000258387 MAST1Q9Y2H9 1570 aa29.31■■■□□ 2.28
PAX3-201ENST00000258387 RRP7BPQ9NSQ0 103 aa29.31■■■□□ 2.28
PAX3-201ENST00000258387 NLRP1Q9C000 1473 aa29.28■■■□□ 2.28
PAX3-201ENST00000258387 ABCC3O15438 1527 aa29.27■■■□□ 2.28
PAX3-201ENST00000258387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.25■■■□□ 2.27
PAX3-201ENST00000258387 ABCC5O15440 1437 aa29.24■■■□□ 2.27
PAX3-201ENST00000258387 UGGT1Q9NYU2 1555 aa29.24■■■□□ 2.27
PAX3-201ENST00000258387 KIF15Q9NS87 1388 aa29.24■■■□□ 2.27
PAX3-201ENST00000258387 RNF17Q9BXT8 1623 aaKnown RBP29.23■■■□□ 2.27
PAX3-201ENST00000258387 ILDR2Q71H61 639 aa29.22■■■□□ 2.27
PAX3-201ENST00000258387 CHIC2Q9UKJ5 165 aa29.22■■■□□ 2.27
PAX3-201ENST00000258387 DUOX2Q9NRD8 1548 aa29.21■■■□□ 2.27
PAX3-201ENST00000258387 NEURL4Q96JN8 1562 aa29.21■■■□□ 2.27
PAX3-201ENST00000258387 SCAF1Q9H7N4 1312 aaKnown RBP29.2■■■□□ 2.26
PAX3-201ENST00000258387 NPHP4O75161 1426 aaPredicted RBP29.19■■■□□ 2.26
PAX3-201ENST00000258387 ERVK-7P63135 1459 aa29.18■■■□□ 2.26
PAX3-201ENST00000258387 SHANK2Q9UPX8 1470 aa29.18■■■□□ 2.26
PAX3-201ENST00000258387 PIP4K2BP78356 416 aa29.18■■■□□ 2.26
PAX3-201ENST00000258387 EIF2AK4Q9P2K8 1649 aaKnown RBP29.18■■■□□ 2.26
PAX3-201ENST00000258387 PTPN23Q9H3S7 1636 aa29.16■■■□□ 2.26
PAX3-201ENST00000258387 MROH1Q8NDA8 1641 aa29.16■■■□□ 2.26
PAX3-201ENST00000258387 POLR1AO95602 1720 aaPredicted RBP29.15■■■□□ 2.26
PAX3-201ENST00000258387 SPATA31D1Q6ZQQ2 1576 aa29.15■■■□□ 2.26
PAX3-201ENST00000258387 DAPK1P53355 1430 aa29.15■■■□□ 2.26
PAX3-201ENST00000258387 FGD6Q6ZV73 1430 aa29.14■■■□□ 2.26
PAX3-201ENST00000258387 ZC3H13Q5T200 1668 aaKnown RBP29.13■■■□□ 2.25
PAX3-201ENST00000258387 TOM1O60784 492 aa29.13■■■□□ 2.25
PAX3-201ENST00000258387 CPS1P31327 1500 aa29.12■■■□□ 2.25
PAX3-201ENST00000258387 ERBINQ96RT1 1412 aa29.11■■■□□ 2.25
PAX3-201ENST00000258387 MED14O60244 1454 aa29.11■■■□□ 2.25
PAX3-201ENST00000258387 CEP152O94986 1710 aa29.09■■■□□ 2.25
PAX3-201ENST00000258387 ANKRD30AQ9BXX3 1397 aa29.09■■■□□ 2.25
PAX3-201ENST00000258387 TXNDC2Q86VQ3 553 aa29.08■■■□□ 2.25
PAX3-201ENST00000258387 KANK1Q14678 1352 aa29.08■■■□□ 2.25
PAX3-201ENST00000258387 CFAP65Q6ZU64 1925 aaKnown RBP29.08■■■□□ 2.25
PAX3-201ENST00000258387 FAM50AQ14320 339 aaKnown RBP29.07■■■□□ 2.24
PAX3-201ENST00000258387 VWDEQ8N2E2 1590 aa29.07■■■□□ 2.24
PAX3-201ENST00000258387 DEPDC5O75140 1603 aa29.06■■■□□ 2.24
PAX3-201ENST00000258387 HSPA1LP34931 641 aa29.06■■■□□ 2.24
PAX3-201ENST00000258387 ARHGAP31Q2M1Z3 1444 aa29.05■■■□□ 2.24
PAX3-201ENST00000258387 LTKP29376 864 aa29.05■■■□□ 2.24
PAX3-201ENST00000258387 STAG3Q9UJ98 1225 aa29.04■■■□□ 2.24
PAX3-201ENST00000258387 CROCC2H7BZ55 1655 aa29.03■■■□□ 2.24
PAX3-201ENST00000258387 PRDM15P57071 1507 aaPredicted RBP29.02■■■□□ 2.24
PAX3-201ENST00000258387 EID1Q9Y6B2 187 aa29.01■■■□□ 2.23
PAX3-201ENST00000258387 IQGAP1P46940 1657 aa29■■■□□ 2.23
PAX3-201ENST00000258387 SOCS7O14512 581 aa28.99■■■□□ 2.23
PAX3-201ENST00000258387 SCAF11Q99590 1463 aaKnown RBP28.98■■■□□ 2.23
PAX3-201ENST00000258387 IDI1Q13907 227 aa28.97■■■□□ 2.23
PAX3-201ENST00000258387 SENP3Q9H4L4 574 aaPredicted RBP28.96■■■□□ 2.23
PAX3-201ENST00000258387 UBR1Q8IWV7 1749 aa28.96■■■□□ 2.23
PAX3-201ENST00000258387 ARHGAP23Q9P227 1491 aa28.92■■■□□ 2.22
PAX3-201ENST00000258387 LRRC7Q96NW7 1537 aa28.92■■■□□ 2.22
PAX3-201ENST00000258387 TMEM2Q9UHN6 1383 aa28.91■■■□□ 2.22
PAX3-201ENST00000258387 SLIT1O75093 1534 aa28.9■■■□□ 2.22
PAX3-201ENST00000258387 LMTK2Q8IWU2 1503 aa28.88■■■□□ 2.21
PAX3-201ENST00000258387 STRCP1A6NGW2 1772 aa28.87■■■□□ 2.21
PAX3-201ENST00000258387 PIK3C2BO00750 1634 aa28.87■■■□□ 2.21
PAX3-201ENST00000258387 ADGRL2O95490 1459 aa28.86■■■□□ 2.21
PAX3-201ENST00000258387 ANKRD50Q9ULJ7 1429 aa28.86■■■□□ 2.21
PAX3-201ENST00000258387 SLC26A8Q96RN1 970 aa28.83■■■□□ 2.21
PAX3-201ENST00000258387 SLC52A1Q9NWF4 448 aa28.83■■■□□ 2.21
PAX3-201ENST00000258387 ALKQ9UM73 1620 aa28.83■■■□□ 2.21
PAX3-201ENST00000258387 BCANQ96GW7 911 aa28.82■■■□□ 2.2
PAX3-201ENST00000258387 NOS1P29475 1434 aa28.82■■■□□ 2.2
PAX3-201ENST00000258387 EFCAB6Q5THR3 1501 aa28.81■■■□□ 2.2
PAX3-201ENST00000258387 PPARGC1BQ86YN6 1023 aaKnown RBP28.8■■■□□ 2.2
PAX3-201ENST00000258387 SYNMO15061 1565 aa28.79■■■□□ 2.2
PAX3-201ENST00000258387 ITGAEP38570 1179 aa28.77■■■□□ 2.2
PAX3-201ENST00000258387 KCNA6P17658 529 aa28.76■■■□□ 2.19
PAX3-201ENST00000258387 RBM33Q96EV2 1170 aaKnown RBP28.75■■■□□ 2.19
PAX3-201ENST00000258387 PROSER2Q86WR7 435 aaPredicted RBP28.73■■■□□ 2.19
PAX3-201ENST00000258387 CHGAP10645 457 aaKnown RBP28.72■■■□□ 2.19
PAX3-201ENST00000258387 PHF23Q9BUL5 403 aaPredicted RBP28.72■■■□□ 2.19
PAX3-201ENST00000258387 MED1Q15648 1581 aaPredicted RBP28.71■■■□□ 2.19
PAX3-201ENST00000258387 TMEM94Q12767 1356 aa28.71■■■□□ 2.19
PAX3-201ENST00000258387 ADGRB3O60242 1522 aa28.69■■■□□ 2.18
PAX3-201ENST00000258387 PPP1R15AO75807 674 aaPredicted RBP28.69■■■□□ 2.18
PAX3-201ENST00000258387 RPRD2Q5VT52 1461 aaKnown RBP28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms