RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 KDM2AQ9Y2K7 1162 aa19.68■□□□□ 0.74
MSI1-201ENST00000257552 DHX29Q7Z478 1369 aaKnown RBP19.68■□□□□ 0.74
MSI1-201ENST00000257552 RPRD2Q5VT52 1461 aaKnown RBP19.67■□□□□ 0.74
MSI1-201ENST00000257552 SPATA31E1Q6ZUB1 1445 aa19.67■□□□□ 0.74
MSI1-201ENST00000257552 TCERG1O14776 1098 aaKnown RBP19.65■□□□□ 0.74
MSI1-201ENST00000257552 RRP1P56182 461 aaKnown RBP19.65■□□□□ 0.74
MSI1-201ENST00000257552 SKAP1Q86WV1 359 aa19.65■□□□□ 0.74
MSI1-201ENST00000257552 ARHGAP5Q13017 1502 aa19.62■□□□□ 0.73
MSI1-201ENST00000257552 ADGRL2O95490 1459 aa19.62■□□□□ 0.73
MSI1-201ENST00000257552 KIAA1107Q9UPP5 1409 aa19.62■□□□□ 0.73
MSI1-201ENST00000257552 BACH2Q9BYV9 841 aa19.62■□□□□ 0.73
MSI1-201ENST00000257552 MBD5Q9P267 1494 aa19.61■□□□□ 0.73
MSI1-201ENST00000257552 BRPF3Q9ULD4 1205 aa19.6■□□□□ 0.73
MSI1-201ENST00000257552 TEX14Q8IWB6 1497 aa19.6■□□□□ 0.73
MSI1-201ENST00000257552 RCAN3Q9UKA8 241 aa19.6■□□□□ 0.73
MSI1-201ENST00000257552 TTC37Q6PGP7 1564 aa19.59■□□□□ 0.73
MSI1-201ENST00000257552 RGL3Q3MIN7 710 aa19.59■□□□□ 0.73
MSI1-201ENST00000257552 USP35Q9P2H5 1018 aa19.59■□□□□ 0.73
MSI1-201ENST00000257552 USP47Q96K76 1375 aa19.58■□□□□ 0.73
MSI1-201ENST00000257552 SYCP2Q9BX26 1530 aa19.58■□□□□ 0.73
MSI1-201ENST00000257552 SAMD9LQ8IVG5 1584 aa19.58■□□□□ 0.73
MSI1-201ENST00000257552 ADGBQ8N7X0 1667 aa19.58■□□□□ 0.73
MSI1-201ENST00000257552 CROCC2H7BZ55 1655 aa19.57■□□□□ 0.72
MSI1-201ENST00000257552 PPM1GO15355 546 aaPredicted RBP19.57■□□□□ 0.72
MSI1-201ENST00000257552 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.57■□□□□ 0.72
MSI1-201ENST00000257552 SLC4A3P48751 1232 aa19.57■□□□□ 0.72
MSI1-201ENST00000257552 ABCC2Q92887 1545 aa19.57■□□□□ 0.72
MSI1-201ENST00000257552 SHROOM2Q13796 1616 aa19.57■□□□□ 0.72
MSI1-201ENST00000257552 CCDC141Q6ZP82 1450 aa19.56■□□□□ 0.72
MSI1-201ENST00000257552 DCAF11Q8TEB1 546 aa19.56■□□□□ 0.72
MSI1-201ENST00000257552 PLIN1O60240 522 aa19.56■□□□□ 0.72
MSI1-201ENST00000257552 CDC42BPBQ9Y5S2 1711 aa19.55■□□□□ 0.72
MSI1-201ENST00000257552 AFAP1Q8N556 730 aa19.53■□□□□ 0.72
MSI1-201ENST00000257552 WASHC2CQ9Y4E1 1318 aa19.53■□□□□ 0.72
MSI1-201ENST00000257552 CDCA7LQ96GN5 454 aa19.52■□□□□ 0.71
MSI1-201ENST00000257552 SHANK2Q9UPX8 1470 aa19.52■□□□□ 0.71
MSI1-201ENST00000257552 EFCAB2Q5VUJ9 269 aa19.5■□□□□ 0.71
MSI1-201ENST00000257552 MS4A1P11836 297 aa19.5■□□□□ 0.71
MSI1-201ENST00000257552 PREX2Q70Z35 1606 aa19.5■□□□□ 0.71
MSI1-201ENST00000257552 GSE1Q14687 1217 aa19.5■□□□□ 0.71
MSI1-201ENST00000257552 RSPH4AQ5TD94 716 aa19.5■□□□□ 0.71
MSI1-201ENST00000257552 EIF5BO60841 1220 aaKnown RBP19.49■□□□□ 0.71
MSI1-201ENST00000257552 CARD11Q9BXL7 1154 aa19.48■□□□□ 0.71
MSI1-201ENST00000257552 CLASP1Q7Z460 1538 aa19.48■□□□□ 0.71
MSI1-201ENST00000257552 ARHGEF12Q9NZN5 1544 aa19.48■□□□□ 0.71
MSI1-201ENST00000257552 NFKBIBQ15653 356 aa19.47■□□□□ 0.71
MSI1-201ENST00000257552 PLEKHH2Q8IVE3 1493 aa19.47■□□□□ 0.71
MSI1-201ENST00000257552 MYBBP1AQ9BQG0 1328 aaKnown RBP19.46■□□□□ 0.71
MSI1-201ENST00000257552 DAXXQ9UER7 740 aaPredicted RBP19.45■□□□□ 0.7
MSI1-201ENST00000257552 ST20-MTHFSA0A0A6YYL1 179 aa19.45■□□□□ 0.7
MSI1-201ENST00000257552 ZCCHC11Q5TAX3 1644 aaKnown RBP19.45■□□□□ 0.7
MSI1-201ENST00000257552 ARHGEF5Q12774 1597 aa19.45■□□□□ 0.7
MSI1-201ENST00000257552 LRPPRCP42704 1394 aaKnown RBP19.44■□□□□ 0.7
MSI1-201ENST00000257552 FRAT1Q92837 279 aaPredicted RBP19.44■□□□□ 0.7
MSI1-201ENST00000257552 CRBNQ96SW2 442 aa19.44■□□□□ 0.7
MSI1-201ENST00000257552 TRAPPC8Q9Y2L5 1435 aa19.44■□□□□ 0.7
MSI1-201ENST00000257552 DDRGK1Q96HY6 314 aa19.44■□□□□ 0.7
MSI1-201ENST00000257552 PLCH2O75038 1416 aa19.43■□□□□ 0.7
MSI1-201ENST00000257552 BCORL1Q5H9F3 1711 aa19.43■□□□□ 0.7
MSI1-201ENST00000257552 FAM135AQ9P2D6 1515 aa19.42■□□□□ 0.7
MSI1-201ENST00000257552 BRD4O60885 1362 aaPredicted RBP19.41■□□□□ 0.7
MSI1-201ENST00000257552 RALBP1Q15311 655 aa19.41■□□□□ 0.7
MSI1-201ENST00000257552 SPAG9O60271 1321 aaKnown RBP19.4■□□□□ 0.7
MSI1-201ENST00000257552 ARID4BQ4LE39 1312 aaPredicted RBP19.4■□□□□ 0.7
MSI1-201ENST00000257552 CCDC144AA2RUR9 1427 aa19.39■□□□□ 0.69
MSI1-201ENST00000257552 MYO5CQ9NQX4 1742 aa19.39■□□□□ 0.69
MSI1-201ENST00000257552 ROCK2O75116 1388 aaKnown RBP19.39■□□□□ 0.69
MSI1-201ENST00000257552 NBPF1Q3BBV0 1214 aa19.38■□□□□ 0.69
MSI1-201ENST00000257552 C20orf194Q5TEA3 1177 aa19.37■□□□□ 0.69
MSI1-201ENST00000257552 OSCARQ8IYS5 282 aa19.37■□□□□ 0.69
MSI1-201ENST00000257552 PDE3BQ13370 1112 aa19.36■□□□□ 0.69
MSI1-201ENST00000257552 NLRP13Q86W25 1043 aa19.36■□□□□ 0.69
MSI1-201ENST00000257552 CC2D1BQ5T0F9 858 aaKnown RBP19.34■□□□□ 0.69
MSI1-201ENST00000257552 UHRF1BP1LA0JNW5 1464 aa19.33■□□□□ 0.69
MSI1-201ENST00000257552 FRAT2O75474 233 aaPredicted RBP19.33■□□□□ 0.68
MSI1-201ENST00000257552 PLA2R1Q13018 1463 aa19.32■□□□□ 0.68
MSI1-201ENST00000257552 POLR1AO95602 1720 aaPredicted RBP19.32■□□□□ 0.68
MSI1-201ENST00000257552 NPM1P06748 294 aaKnown RBP eCLIP19.32■□□□□ 0.68
MSI1-201ENST00000257552 KDM5DQ9BY66 1539 aa19.31■□□□□ 0.68
MSI1-201ENST00000257552 KIF3BO15066 747 aa19.31■□□□□ 0.68
MSI1-201ENST00000257552 WDR7Q9Y4E6 1490 aa19.3■□□□□ 0.68
MSI1-201ENST00000257552 SCAPERQ9BY12 1400 aa19.3■□□□□ 0.68
MSI1-201ENST00000257552 RGS3P49796 1198 aa19.29■□□□□ 0.68
MSI1-201ENST00000257552 KTN1Q86UP2 1357 aaKnown RBP19.29■□□□□ 0.68
MSI1-201ENST00000257552 UBE2Q2Q8WVN8 375 aa19.29■□□□□ 0.68
MSI1-201ENST00000257552 FANCAO15360 1455 aa19.28■□□□□ 0.68
MSI1-201ENST00000257552 ASXL2Q76L83 1435 aa19.28■□□□□ 0.68
MSI1-201ENST00000257552 KDM5CP41229 1560 aa19.28■□□□□ 0.68
MSI1-201ENST00000257552 ABCC1P33527 1531 aa19.27■□□□□ 0.68
MSI1-201ENST00000257552 DUOX2Q9NRD8 1548 aa19.26■□□□□ 0.67
MSI1-201ENST00000257552 UHRF1BP1Q6BDS2 1440 aa19.25■□□□□ 0.67
MSI1-201ENST00000257552 RALGAPBQ86X10 1494 aa19.25■□□□□ 0.67
MSI1-201ENST00000257552 FAM161AQ3B820 660 aa19.24■□□□□ 0.67
MSI1-201ENST00000257552 C8orf34Q49A92 452 aa19.23■□□□□ 0.67
MSI1-201ENST00000257552 MAST1Q9Y2H9 1570 aa19.23■□□□□ 0.67
MSI1-201ENST00000257552 ERBINQ96RT1 1412 aa19.22■□□□□ 0.67
MSI1-201ENST00000257552 KDM2BQ8NHM5 1336 aa19.22■□□□□ 0.67
MSI1-201ENST00000257552 ADGRL1O94910 1474 aa19.22■□□□□ 0.67
MSI1-201ENST00000257552 A2MP01023 1474 aa19.21■□□□□ 0.67
MSI1-201ENST00000257552 PARD3Q8TEW0 1356 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms