RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 U2SURPO15042 1029 aaKnown RBP12.67□□□□□ -0.38
TRPM1-201ENST00000256552 CCDC146Q8IYE0 955 aa12.67□□□□□ -0.38
TRPM1-201ENST00000256552 TSPYL1Q9H0U9 437 aa12.67□□□□□ -0.38
TRPM1-201ENST00000256552 IPO4Q8TEX9 1081 aaKnown RBP12.67□□□□□ -0.38
TRPM1-201ENST00000256552 APBB1O00213 710 aa12.66□□□□□ -0.38
TRPM1-201ENST00000256552 ROCK2O75116 1388 aaKnown RBP12.66□□□□□ -0.38
TRPM1-201ENST00000256552 UQCRHLA0A096LP55 91 aa12.66□□□□□ -0.38
TRPM1-201ENST00000256552 UQCRHP07919 91 aa12.66□□□□□ -0.38
TRPM1-201ENST00000256552 PLCD3Q8N3E9 789 aa12.65□□□□□ -0.38
TRPM1-201ENST00000256552 FMN1Q68DA7 1419 aa12.65□□□□□ -0.38
TRPM1-201ENST00000256552 IPO8O15397 1037 aaKnown RBP12.65□□□□□ -0.38
TRPM1-201ENST00000256552 CFDP1Q9UEE9 299 aaPredicted RBP12.65□□□□□ -0.38
TRPM1-201ENST00000256552 KCNJ4P48050 445 aa12.65□□□□□ -0.38
TRPM1-201ENST00000256552 PHLDB1Q86UU1 1377 aa12.64□□□□□ -0.39
TRPM1-201ENST00000256552 AEBP1Q8IUX7 1158 aa12.64□□□□□ -0.39
TRPM1-201ENST00000256552 CCDC173Q0VFZ6 552 aa12.64□□□□□ -0.39
TRPM1-201ENST00000256552 CECR2Q9BXF3 1484 aa12.64□□□□□ -0.39
TRPM1-201ENST00000256552 GPS2Q13227 327 aa12.64□□□□□ -0.39
TRPM1-201ENST00000256552 GRPEL1Q9HAV7 217 aa12.64□□□□□ -0.39
TRPM1-201ENST00000256552 MAPK8IP2Q13387 824 aaPredicted RBP12.63□□□□□ -0.39
TRPM1-201ENST00000256552 NOL8Q76FK4 1167 aaKnown RBP12.63□□□□□ -0.39
TRPM1-201ENST00000256552 CNTLNQ9NXG0 1405 aa12.63□□□□□ -0.39
TRPM1-201ENST00000256552 POGKQ9P215 609 aa12.63□□□□□ -0.39
TRPM1-201ENST00000256552 COG6Q9Y2V7 657 aa12.63□□□□□ -0.39
TRPM1-201ENST00000256552 LETM1O95202 739 aaPredicted RBP12.63□□□□□ -0.39
TRPM1-201ENST00000256552 ST18O60284 1047 aa12.63□□□□□ -0.39
TRPM1-201ENST00000256552 TPM4P67936 248 aa12.63□□□□□ -0.39
TRPM1-201ENST00000256552 NOM1Q5C9Z4 860 aaKnown RBP12.63□□□□□ -0.39
TRPM1-201ENST00000256552 CCDC39Q9UFE4 941 aa12.63□□□□□ -0.39
TRPM1-201ENST00000256552 CGNL1Q0VF96 1302 aa12.62□□□□□ -0.39
TRPM1-201ENST00000256552 ZNF592Q92610 1267 aa12.62□□□□□ -0.39
TRPM1-201ENST00000256552 HTATSF1O43719 755 aaKnown RBP12.61□□□□□ -0.39
TRPM1-201ENST00000256552 CGNQ9P2M7 1197 aaKnown RBP12.61□□□□□ -0.39
TRPM1-201ENST00000256552 HOMEZQ8IX15 550 aa12.61□□□□□ -0.39
TRPM1-201ENST00000256552 DNAJC2Q99543 621 aaKnown RBP12.61□□□□□ -0.39
TRPM1-201ENST00000256552 TAOK2Q9UL54 1235 aa12.61□□□□□ -0.39
TRPM1-201ENST00000256552 HMGN5P82970 282 aaKnown RBP12.61□□□□□ -0.39
TRPM1-201ENST00000256552 PKD2Q13563 968 aa12.61□□□□□ -0.39
TRPM1-201ENST00000256552 MORC1Q86VD1 984 aa12.61□□□□□ -0.39
TRPM1-201ENST00000256552 SMC4Q9NTJ3 1288 aa12.61□□□□□ -0.39
TRPM1-201ENST00000256552 GTPBP4Q9BZE4 634 aaKnown RBP12.6□□□□□ -0.39
TRPM1-201ENST00000256552 C22orf23Q9BZE7 217 aa12.6□□□□□ -0.39
TRPM1-201ENST00000256552 MCTP1Q6DN14 999 aa12.6□□□□□ -0.39
TRPM1-201ENST00000256552 FOXD4L6Q3SYB3 417 aaPredicted RBP12.6□□□□□ -0.39
TRPM1-201ENST00000256552 FOXD4L3Q6VB84 417 aaPredicted RBP12.6□□□□□ -0.39
TRPM1-201ENST00000256552 KIF16BQ96L93 1317 aa12.6□□□□□ -0.39
TRPM1-201ENST00000256552 CCDC7Q96M83 1385 aa12.6□□□□□ -0.39
TRPM1-201ENST00000256552 TEX35Q5T0J7 233 aa12.59□□□□□ -0.39
TRPM1-201ENST00000256552 NCBP3Q53F19 620 aaKnown RBP12.58□□□□□ -0.39
TRPM1-201ENST00000256552 STAG3Q9UJ98 1225 aa12.58□□□□□ -0.4
TRPM1-201ENST00000256552 SENP3Q9H4L4 574 aaPredicted RBP12.57□□□□□ -0.4
TRPM1-201ENST00000256552 DIAPH3Q9NSV4 1193 aa12.57□□□□□ -0.4
TRPM1-201ENST00000256552 ZSCAN30Q86W11 494 aa12.57□□□□□ -0.4
TRPM1-201ENST00000256552 KLHL34Q8N239 644 aa12.57□□□□□ -0.4
TRPM1-201ENST00000256552 BCL2L13Q9BXK5 485 aa12.57□□□□□ -0.4
TRPM1-201ENST00000256552 SMG6Q86US8 1419 aaKnown RBP12.57□□□□□ -0.4
TRPM1-201ENST00000256552 E9PSI1 815 aa12.57□□□□□ -0.4
TRPM1-201ENST00000256552 OS9Q13438 667 aaPredicted RBP12.57□□□□□ -0.4
TRPM1-201ENST00000256552 CHMP4AQ9BY43 222 aa12.57□□□□□ -0.4
TRPM1-201ENST00000256552 KIF7Q2M1P5 1343 aa12.56□□□□□ -0.4
TRPM1-201ENST00000256552 RNF214Q8ND24 703 aa12.56□□□□□ -0.4
TRPM1-201ENST00000256552 RUSC2Q8N2Y8 1516 aa12.55□□□□□ -0.4
TRPM1-201ENST00000256552 RRAGDQ9NQL2 400 aaPredicted RBP12.55□□□□□ -0.4
TRPM1-201ENST00000256552 RAPGEF2Q9Y4G8 1499 aa12.55□□□□□ -0.4
TRPM1-201ENST00000256552 KIF20AO95235 890 aa12.55□□□□□ -0.4
TRPM1-201ENST00000256552 CCDC184Q52MB2 194 aa12.55□□□□□ -0.4
TRPM1-201ENST00000256552 MCM4P33991 863 aa12.54□□□□□ -0.4
TRPM1-201ENST00000256552 CAVIN1Q6NZI2 390 aaKnown RBP12.54□□□□□ -0.4
TRPM1-201ENST00000256552 DYNC1I1O14576 645 aa12.54□□□□□ -0.4
TRPM1-201ENST00000256552 CBX1P83916 185 aa12.54□□□□□ -0.4
TRPM1-201ENST00000256552 ST20-MTHFSA0A0A6YYL1 179 aa12.54□□□□□ -0.4
TRPM1-201ENST00000256552 U2AF1L5P0DN76 240 aaPredicted RBP12.54□□□□□ -0.4
TRPM1-201ENST00000256552 U2AF1Q01081 240 aaKnown RBP eCLIP12.54□□□□□ -0.4
TRPM1-201ENST00000256552 PPP4R3BQ5MIZ7 849 aa12.54□□□□□ -0.4
TRPM1-201ENST00000256552 CWC15Q9P013 229 aaKnown RBP12.54□□□□□ -0.4
TRPM1-201ENST00000256552 NUCB2P80303 420 aa12.54□□□□□ -0.4
TRPM1-201ENST00000256552 CDCA7LQ96GN5 454 aa12.54□□□□□ -0.4
TRPM1-201ENST00000256552 C14orf37Q86TY3 774 aa12.53□□□□□ -0.4
TRPM1-201ENST00000256552 KIF3AQ9Y496 699 aa12.53□□□□□ -0.4
TRPM1-201ENST00000256552 ANKRD45Q5TZF3 282 aa12.53□□□□□ -0.4
TRPM1-201ENST00000256552 CLGNO14967 610 aa12.53□□□□□ -0.4
TRPM1-201ENST00000256552 CALCOCO1Q9P1Z2 691 aa12.53□□□□□ -0.4
TRPM1-201ENST00000256552 USP47Q96K76 1375 aa12.52□□□□□ -0.41
TRPM1-201ENST00000256552 MROH2BQ7Z745 1585 aa12.52□□□□□ -0.41
TRPM1-201ENST00000256552 TULP1O00294 542 aaPredicted RBP12.52□□□□□ -0.41
TRPM1-201ENST00000256552 RRP12Q5JTH9 1297 aaKnown RBP12.51□□□□□ -0.41
TRPM1-201ENST00000256552 IFT57Q9NWB7 429 aa12.51□□□□□ -0.41
TRPM1-201ENST00000256552 SASS6Q6UVJ0 657 aa12.51□□□□□ -0.41
TRPM1-201ENST00000256552 RRP7AQ9Y3A4 280 aaKnown RBP12.51□□□□□ -0.41
TRPM1-201ENST00000256552 CARMIL1Q5VZK9 1371 aa12.51□□□□□ -0.41
TRPM1-201ENST00000256552 AXDND1Q5T1B0 1012 aaPredicted RBP12.51□□□□□ -0.41
TRPM1-201ENST00000256552 PANK3Q9H999 370 aa12.51□□□□□ -0.41
TRPM1-201ENST00000256552 CCDC18Q5T9S5 1454 aa12.51□□□□□ -0.41
TRPM1-201ENST00000256552 CCDC34Q96HJ3 373 aa12.51□□□□□ -0.41
TRPM1-201ENST00000256552 TPM3P06753 285 aa12.51□□□□□ -0.41
TRPM1-201ENST00000256552 BAZ1AQ9NRL2 1556 aaPredicted RBP12.5□□□□□ -0.41
TRPM1-201ENST00000256552 PLEKHD1A6NEE1 506 aa12.5□□□□□ -0.41
TRPM1-201ENST00000256552 VGLL3A8MV65 326 aa12.5□□□□□ -0.41
TRPM1-201ENST00000256552 GNL2Q13823 731 aaKnown RBP12.5□□□□□ -0.41
TRPM1-201ENST00000256552 ZKSCAN2Q63HK3 967 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms