RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 L3MBTL2Q969R5 705 aa27.1■■□□□ 1.93
TRIM47-201ENST00000254816 HECW2Q9P2P5 1572 aa27.09■■□□□ 1.93
TRIM47-201ENST00000254816 PPRC1Q5VV67 1664 aaKnown RBP27.08■■□□□ 1.93
TRIM47-201ENST00000254816 KIF13AQ9H1H9 1805 aa27.08■■□□□ 1.92
TRIM47-201ENST00000254816 RICTORQ6R327 1708 aa27.07■■□□□ 1.92
TRIM47-201ENST00000254816 DEPDC5O75140 1603 aa27.06■■□□□ 1.92
TRIM47-201ENST00000254816 DHX29Q7Z478 1369 aaKnown RBP27.05■■□□□ 1.92
TRIM47-201ENST00000254816 TEX14Q8IWB6 1497 aa27.05■■□□□ 1.92
TRIM47-201ENST00000254816 MLH3Q9UHC1 1453 aa27.05■■□□□ 1.92
TRIM47-201ENST00000254816 EIF2AK4Q9P2K8 1649 aaKnown RBP27.03■■□□□ 1.92
TRIM47-201ENST00000254816 KIF3BO15066 747 aa27.03■■□□□ 1.92
TRIM47-201ENST00000254816 ABCA6Q8N139 1617 aa27.03■■□□□ 1.92
TRIM47-201ENST00000254816 A2MP01023 1474 aa27■■□□□ 1.91
TRIM47-201ENST00000254816 FRMPD1Q5SYB0 1578 aa26.98■■□□□ 1.91
TRIM47-201ENST00000254816 MROH1Q8NDA8 1641 aa26.97■■□□□ 1.91
TRIM47-201ENST00000254816 E9PCH4 1651 aa26.97■■□□□ 1.91
TRIM47-201ENST00000254816 PLA2R1Q13018 1463 aa26.95■■□□□ 1.9
TRIM47-201ENST00000254816 HIRIP3Q9BW71 556 aaPredicted RBP26.95■■□□□ 1.9
TRIM47-201ENST00000254816 PRDM15P57071 1507 aaPredicted RBP26.93■■□□□ 1.9
TRIM47-201ENST00000254816 DIP2CQ9Y2E4 1556 aa26.93■■□□□ 1.9
TRIM47-201ENST00000254816 VWDEQ8N2E2 1590 aa26.93■■□□□ 1.9
TRIM47-201ENST00000254816 SCAF1Q9H7N4 1312 aaKnown RBP26.92■■□□□ 1.9
TRIM47-201ENST00000254816 NBPF8Q3BBV2 869 aa26.92■■□□□ 1.9
TRIM47-201ENST00000254816 TET3O43151 1660 aa26.91■■□□□ 1.9
TRIM47-201ENST00000254816 KANK1Q14678 1352 aa26.91■■□□□ 1.9
TRIM47-201ENST00000254816 CCDC144AA2RUR9 1427 aa26.9■■□□□ 1.9
TRIM47-201ENST00000254816 RNF17Q9BXT8 1623 aaKnown RBP26.89■■□□□ 1.9
TRIM47-201ENST00000254816 CEP152O94986 1710 aa26.89■■□□□ 1.89
TRIM47-201ENST00000254816 YEATS2Q9ULM3 1422 aa26.89■■□□□ 1.89
TRIM47-201ENST00000254816 SPHKAPQ2M3C7 1700 aa26.86■■□□□ 1.89
TRIM47-201ENST00000254816 BCORL1Q5H9F3 1711 aa26.85■■□□□ 1.89
TRIM47-201ENST00000254816 GGT6Q6P531 493 aa26.83■■□□□ 1.89
TRIM47-201ENST00000254816 ATP10AO60312 1499 aa26.83■■□□□ 1.89
TRIM47-201ENST00000254816 ZMYM4Q5VZL5 1548 aa26.83■■□□□ 1.89
TRIM47-201ENST00000254816 ZNF326Q5BKZ1 582 aaKnown RBP26.83■■□□□ 1.89
TRIM47-201ENST00000254816 KDM2AQ9Y2K7 1162 aa26.79■■□□□ 1.88
TRIM47-201ENST00000254816 RGL3Q3MIN7 710 aa26.79■■□□□ 1.88
TRIM47-201ENST00000254816 EFCAB6Q5THR3 1501 aa26.78■■□□□ 1.88
TRIM47-201ENST00000254816 CFAP65Q6ZU64 1925 aaKnown RBP26.78■■□□□ 1.88
TRIM47-201ENST00000254816 DCAF11Q8TEB1 546 aa26.78■■□□□ 1.88
TRIM47-201ENST00000254816 COL17A1Q9UMD9 1497 aaPredicted RBP26.77■■□□□ 1.88
TRIM47-201ENST00000254816 TRPM2O94759 1503 aa26.77■■□□□ 1.88
TRIM47-201ENST00000254816 CLTCL1P53675 1640 aa26.75■■□□□ 1.87
TRIM47-201ENST00000254816 LMTK2Q8IWU2 1503 aa26.75■■□□□ 1.87
TRIM47-201ENST00000254816 PTPRTO14522 1441 aa26.75■■□□□ 1.87
TRIM47-201ENST00000254816 HSPA5P11021 654 aaKnown RBP26.74■■□□□ 1.87
TRIM47-201ENST00000254816 MIER1Q8N108 512 aa26.74■■□□□ 1.87
TRIM47-201ENST00000254816 UHRF1BP1Q6BDS2 1440 aa26.72■■□□□ 1.87
TRIM47-201ENST00000254816 EIF4G2P78344 907 aaKnown RBP eCLIP26.7■■□□□ 1.87
TRIM47-201ENST00000254816 ABCC3O15438 1527 aa26.7■■□□□ 1.86
TRIM47-201ENST00000254816 WASHC2CQ9Y4E1 1318 aa26.69■■□□□ 1.86
TRIM47-201ENST00000254816 CENPBP07199 599 aaPredicted RBP26.69■■□□□ 1.86
TRIM47-201ENST00000254816 UGGT1Q9NYU2 1555 aa26.69■■□□□ 1.86
TRIM47-201ENST00000254816 CAMSAP1Q5T5Y3 1602 aa26.68■■□□□ 1.86
TRIM47-201ENST00000254816 SPATA31E1Q6ZUB1 1445 aa26.66■■□□□ 1.86
TRIM47-201ENST00000254816 SIGLEC1Q9BZZ2 1709 aa26.66■■□□□ 1.86
TRIM47-201ENST00000254816 DDX10Q13206 875 aaKnown RBP26.65■■□□□ 1.86
TRIM47-201ENST00000254816 NPATQ14207 1427 aa26.65■■□□□ 1.86
TRIM47-201ENST00000254816 RALGAPBQ86X10 1494 aa26.64■■□□□ 1.86
TRIM47-201ENST00000254816 YTHDC1Q96MU7 727 aaKnown RBP26.63■■□□□ 1.85
TRIM47-201ENST00000254816 KIF1BO60333 1816 aa26.62■■□□□ 1.85
TRIM47-201ENST00000254816 TRPM1Q7Z4N2 1603 aa26.61■■□□□ 1.85
TRIM47-201ENST00000254816 PRAG1Q86YV5 1406 aa26.61■■□□□ 1.85
TRIM47-201ENST00000254816 ZC3H13Q5T200 1668 aaKnown RBP26.61■■□□□ 1.85
TRIM47-201ENST00000254816 REREQ9P2R6 1566 aa26.6■■□□□ 1.85
TRIM47-201ENST00000254816 ARHGEF40Q8TER5 1519 aa26.59■■□□□ 1.85
TRIM47-201ENST00000254816 TRHP20396 242 aaPredicted RBP26.59■■□□□ 1.85
TRIM47-201ENST00000254816 MROH2AA6NES4 1674 aa26.57■■□□□ 1.84
TRIM47-201ENST00000254816 USP47Q96K76 1375 aa26.56■■□□□ 1.84
TRIM47-201ENST00000254816 CARD11Q9BXL7 1154 aa26.55■■□□□ 1.84
TRIM47-201ENST00000254816 AGLP35573 1532 aa26.54■■□□□ 1.84
TRIM47-201ENST00000254816 WASHC2AQ641Q2 1341 aa26.53■■□□□ 1.84
TRIM47-201ENST00000254816 C11orf95C9JLR9 678 aaPredicted RBP26.53■■□□□ 1.84
TRIM47-201ENST00000254816 ROCK2O75116 1388 aaKnown RBP26.53■■□□□ 1.84
TRIM47-201ENST00000254816 DNAJC5Q9H3Z4 198 aa26.52■■□□□ 1.84
TRIM47-201ENST00000254816 NBPF1Q3BBV0 1214 aa26.51■■□□□ 1.83
TRIM47-201ENST00000254816 MADDQ8WXG6 1647 aa26.5■■□□□ 1.83
TRIM47-201ENST00000254816 CNTLNQ9NXG0 1405 aa26.5■■□□□ 1.83
TRIM47-201ENST00000254816 POLR1AO95602 1720 aaPredicted RBP26.5■■□□□ 1.83
TRIM47-201ENST00000254816 MLECQ14165 292 aa26.5■■□□□ 1.83
TRIM47-201ENST00000254816 SYNMO15061 1565 aa26.49■■□□□ 1.83
TRIM47-201ENST00000254816 NEURL4Q96JN8 1562 aa26.49■■□□□ 1.83
TRIM47-201ENST00000254816 CLTCQ00610 1675 aaKnown RBP26.49■■□□□ 1.83
TRIM47-201ENST00000254816 NOS1P29475 1434 aa26.48■■□□□ 1.83
TRIM47-201ENST00000254816 ARHGAP31Q2M1Z3 1444 aa26.48■■□□□ 1.83
TRIM47-201ENST00000254816 CHGAP10645 457 aaKnown RBP26.48■■□□□ 1.83
TRIM47-201ENST00000254816 GTF3C3Q9Y5Q9 886 aa26.48■■□□□ 1.83
TRIM47-201ENST00000254816 IFT172Q9UG01 1749 aa26.47■■□□□ 1.83
TRIM47-201ENST00000254816 PREX1Q8TCU6 1659 aa26.47■■□□□ 1.83
TRIM47-201ENST00000254816 ADGRB3O60242 1522 aa26.46■■□□□ 1.83
TRIM47-201ENST00000254816 PIK3C2BO00750 1634 aa26.44■■□□□ 1.82
TRIM47-201ENST00000254816 CCDC7Q96M83 1385 aa26.43■■□□□ 1.82
TRIM47-201ENST00000254816 LAMC1P11047 1609 aa26.41■■□□□ 1.82
TRIM47-201ENST00000254816 ST20-MTHFSA0A0A6YYL1 179 aa26.4■■□□□ 1.82
TRIM47-201ENST00000254816 GPRASP1Q5JY77 1395 aa26.4■■□□□ 1.82
TRIM47-201ENST00000254816 KIF7Q2M1P5 1343 aa26.4■■□□□ 1.82
TRIM47-201ENST00000254816 FBXO31Q5XUX0 539 aaPredicted RBP26.39■■□□□ 1.82
TRIM47-201ENST00000254816 PPLO60437 1756 aa26.38■■□□□ 1.81
TRIM47-201ENST00000254816 MYO5BQ9ULV0 1848 aa26.37■■□□□ 1.81
TRIM47-201ENST00000254816 ARID4BQ4LE39 1312 aaPredicted RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms