RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 TSHZ2Q9NRE2 1034 aa12.94□□□□□ -0.34
RPA1-201ENST00000254719 SPHKAPQ2M3C7 1700 aa12.94□□□□□ -0.34
RPA1-201ENST00000254719 KIF15Q9NS87 1388 aa12.94□□□□□ -0.34
RPA1-201ENST00000254719 MROH2AA6NES4 1674 aa12.93□□□□□ -0.34
RPA1-201ENST00000254719 KIDINS220Q9ULH0 1771 aa12.93□□□□□ -0.34
RPA1-201ENST00000254719 PRKRIP1Q9H875 184 aaPredicted RBP12.93□□□□□ -0.34
RPA1-201ENST00000254719 CLTCL1P53675 1640 aa12.93□□□□□ -0.34
RPA1-201ENST00000254719 PRAG1Q86YV5 1406 aa12.92□□□□□ -0.34
RPA1-201ENST00000254719 PKD2Q13563 968 aa12.92□□□□□ -0.34
RPA1-201ENST00000254719 SLC4A1APQ9BWU0 796 aaKnown RBP12.91□□□□□ -0.34
RPA1-201ENST00000254719 ANKRD30AQ9BXX3 1397 aa12.9□□□□□ -0.34
RPA1-201ENST00000254719 SIGLEC1Q9BZZ2 1709 aa12.9□□□□□ -0.34
RPA1-201ENST00000254719 PLCH2O75038 1416 aa12.9□□□□□ -0.34
RPA1-201ENST00000254719 FRMPD1Q5SYB0 1578 aa12.89□□□□□ -0.35
RPA1-201ENST00000254719 GPRASP1Q5JY77 1395 aa12.88□□□□□ -0.35
RPA1-201ENST00000254719 ARAP3Q8WWN8 1544 aa12.88□□□□□ -0.35
RPA1-201ENST00000254719 ARHGAP5Q13017 1502 aa12.88□□□□□ -0.35
RPA1-201ENST00000254719 USP47Q96K76 1375 aa12.88□□□□□ -0.35
RPA1-201ENST00000254719 NUP155O75694 1391 aa12.86□□□□□ -0.35
RPA1-201ENST00000254719 DUOX2Q9NRD8 1548 aa12.86□□□□□ -0.35
RPA1-201ENST00000254719 UGGT1Q9NYU2 1555 aa12.85□□□□□ -0.35
RPA1-201ENST00000254719 ZNF777Q9ULD5 760 aaPredicted RBP12.85□□□□□ -0.35
RPA1-201ENST00000254719 EIF4G2P78344 907 aaKnown RBP eCLIP12.85□□□□□ -0.35
RPA1-201ENST00000254719 PER1O15534 1290 aaPredicted RBP12.84□□□□□ -0.35
RPA1-201ENST00000254719 TESK2Q96S53 571 aa12.84□□□□□ -0.35
RPA1-201ENST00000254719 PPRC1Q5VV67 1664 aaKnown RBP12.84□□□□□ -0.35
RPA1-201ENST00000254719 PTPRTO14522 1441 aa12.84□□□□□ -0.35
RPA1-201ENST00000254719 ZC3H13Q5T200 1668 aaKnown RBP12.83□□□□□ -0.36
RPA1-201ENST00000254719 NBPF1Q3BBV0 1214 aa12.83□□□□□ -0.36
RPA1-201ENST00000254719 TRPM2O94759 1503 aa12.83□□□□□ -0.36
RPA1-201ENST00000254719 LRPPRCP42704 1394 aaKnown RBP12.83□□□□□ -0.36
RPA1-201ENST00000254719 PLEKHD1A6NEE1 506 aa12.82□□□□□ -0.36
RPA1-201ENST00000254719 ANP32EQ9BTT0 268 aa12.82□□□□□ -0.36
RPA1-201ENST00000254719 TET3O43151 1660 aa12.82□□□□□ -0.36
RPA1-201ENST00000254719 ERBINQ96RT1 1412 aa12.82□□□□□ -0.36
RPA1-201ENST00000254719 CDK11AQ9UQ88 783 aaPredicted RBP12.81□□□□□ -0.36
RPA1-201ENST00000254719 WDR7Q9Y4E6 1490 aa12.81□□□□□ -0.36
RPA1-201ENST00000254719 DISP3Q9P2K9 1392 aa12.8□□□□□ -0.36
RPA1-201ENST00000254719 NEURL4Q96JN8 1562 aa12.8□□□□□ -0.36
RPA1-201ENST00000254719 COL17A1Q9UMD9 1497 aaPredicted RBP12.8□□□□□ -0.36
RPA1-201ENST00000254719 RNF123Q5XPI4 1314 aa12.79□□□□□ -0.36
RPA1-201ENST00000254719 EIF2AK4Q9P2K8 1649 aaKnown RBP12.79□□□□□ -0.36
RPA1-201ENST00000254719 ABCA6Q8N139 1617 aa12.79□□□□□ -0.36
RPA1-201ENST00000254719 KIAA1210Q9ULL0 1709 aa12.78□□□□□ -0.36
RPA1-201ENST00000254719 ANP32CO43423 234 aa12.78□□□□□ -0.36
RPA1-201ENST00000254719 ZNF518AQ6AHZ1 1483 aa12.76□□□□□ -0.37
RPA1-201ENST00000254719 FKBP8Q14318 412 aa12.76□□□□□ -0.37
RPA1-201ENST00000254719 NRXN1Q9ULB1 1477 aa12.76□□□□□ -0.37
RPA1-201ENST00000254719 MYO3AQ8NEV4 1616 aa12.76□□□□□ -0.37
RPA1-201ENST00000254719 ATP7AQ04656 1500 aa12.76□□□□□ -0.37
RPA1-201ENST00000254719 ST20-MTHFSA0A0A6YYL1 179 aa12.76□□□□□ -0.37
RPA1-201ENST00000254719 PPLO60437 1756 aa12.75□□□□□ -0.37
RPA1-201ENST00000254719 ERICH6Q7L0X2 663 aa12.75□□□□□ -0.37
RPA1-201ENST00000254719 PNISRQ8TF01 805 aaKnown RBP12.75□□□□□ -0.37
RPA1-201ENST00000254719 PARD3Q8TEW0 1356 aa12.74□□□□□ -0.37
RPA1-201ENST00000254719 PIK3C2BO00750 1634 aa12.74□□□□□ -0.37
RPA1-201ENST00000254719 RTEL1-TNFRSF6BF6WH68 1400 aa12.74□□□□□ -0.37
RPA1-201ENST00000254719 RICTORQ6R327 1708 aa12.73□□□□□ -0.37
RPA1-201ENST00000254719 EFCAB6Q5THR3 1501 aa12.73□□□□□ -0.37
RPA1-201ENST00000254719 MAP3K4Q9Y6R4 1608 aa12.72□□□□□ -0.37
RPA1-201ENST00000254719 MYO5BQ9ULV0 1848 aa12.72□□□□□ -0.37
RPA1-201ENST00000254719 AFAP1Q8N556 730 aa12.72□□□□□ -0.37
RPA1-201ENST00000254719 MSH5O43196 834 aa12.71□□□□□ -0.38
RPA1-201ENST00000254719 ZBED9Q6R2W3 1325 aa12.71□□□□□ -0.38
RPA1-201ENST00000254719 SHPRHQ149N8 1683 aa12.71□□□□□ -0.38
RPA1-201ENST00000254719 LMTK2Q8IWU2 1503 aa12.7□□□□□ -0.38
RPA1-201ENST00000254719 ADGRB1O14514 1584 aa12.7□□□□□ -0.38
RPA1-201ENST00000254719 SLC24A1O60721 1099 aa12.69□□□□□ -0.38
RPA1-201ENST00000254719 DCAF11Q8TEB1 546 aa12.69□□□□□ -0.38
RPA1-201ENST00000254719 SYNMO15061 1565 aa12.69□□□□□ -0.38
RPA1-201ENST00000254719 FANCAO15360 1455 aa12.69□□□□□ -0.38
RPA1-201ENST00000254719 IRX6P78412 446 aaPredicted RBP12.69□□□□□ -0.38
RPA1-201ENST00000254719 ARID4BQ4LE39 1312 aaPredicted RBP12.68□□□□□ -0.38
RPA1-201ENST00000254719 ASXL2Q76L83 1435 aa12.68□□□□□ -0.38
RPA1-201ENST00000254719 ADGRB3O60242 1522 aa12.68□□□□□ -0.38
RPA1-201ENST00000254719 CFAP65Q6ZU64 1925 aaKnown RBP12.67□□□□□ -0.38
RPA1-201ENST00000254719 SMG6Q86US8 1419 aaKnown RBP12.67□□□□□ -0.38
RPA1-201ENST00000254719 HNRNPUQ00839 825 aaKnown RBP eCLIP12.67□□□□□ -0.38
RPA1-201ENST00000254719 KIF1BO60333 1816 aa12.67□□□□□ -0.38
RPA1-201ENST00000254719 SENP3-EIF4A1A0A087X0R7 540 aa12.66□□□□□ -0.38
RPA1-201ENST00000254719 CCDC144AA2RUR9 1427 aa12.66□□□□□ -0.38
RPA1-201ENST00000254719 HECW2Q9P2P5 1572 aa12.66□□□□□ -0.38
RPA1-201ENST00000254719 RSPH4AQ5TD94 716 aa12.64□□□□□ -0.39
RPA1-201ENST00000254719 SCAPERQ9BY12 1400 aa12.64□□□□□ -0.39
RPA1-201ENST00000254719 BLMP54132 1417 aaPredicted RBP12.64□□□□□ -0.39
RPA1-201ENST00000254719 ERVK-7P63135 1459 aa12.63□□□□□ -0.39
RPA1-201ENST00000254719 ASXL1Q8IXJ9 1541 aa12.63□□□□□ -0.39
RPA1-201ENST00000254719 TSPY4P0CV99 314 aa12.63□□□□□ -0.39
RPA1-201ENST00000254719 TSPY10P0CW01 314 aa12.63□□□□□ -0.39
RPA1-201ENST00000254719 KDM2AQ9Y2K7 1162 aa12.63□□□□□ -0.39
RPA1-201ENST00000254719 SETD1AO15047 1707 aaKnown RBP12.62□□□□□ -0.39
RPA1-201ENST00000254719 ARHGEF28Q8N1W1 1705 aaKnown RBP12.62□□□□□ -0.39
RPA1-201ENST00000254719 ROCK2O75116 1388 aaKnown RBP12.62□□□□□ -0.39
RPA1-201ENST00000254719 CAMSAP1Q5T5Y3 1602 aa12.62□□□□□ -0.39
RPA1-201ENST00000254719 DIP2CQ9Y2E4 1556 aa12.61□□□□□ -0.39
RPA1-201ENST00000254719 CARD11Q9BXL7 1154 aa12.61□□□□□ -0.39
RPA1-201ENST00000254719 MYOM2P54296 1465 aa12.61□□□□□ -0.39
RPA1-201ENST00000254719 FAM9BQ8IZU0 186 aa12.61□□□□□ -0.39
RPA1-201ENST00000254719 ADGRL1O94910 1474 aa12.6□□□□□ -0.39
RPA1-201ENST00000254719 ZMYM4Q5VZL5 1548 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 296.9 ms