RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 L3MBTL2Q969R5 705 aa24.78■■□□□ 1.56
PCCB-201ENST00000251654 RICTORQ6R327 1708 aa24.77■■□□□ 1.56
PCCB-201ENST00000251654 DHX29Q7Z478 1369 aaKnown RBP24.76■■□□□ 1.55
PCCB-201ENST00000251654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.76■■□□□ 1.55
PCCB-201ENST00000251654 PPRC1Q5VV67 1664 aaKnown RBP24.75■■□□□ 1.55
PCCB-201ENST00000251654 MROH1Q8NDA8 1641 aa24.73■■□□□ 1.55
PCCB-201ENST00000251654 VWDEQ8N2E2 1590 aa24.73■■□□□ 1.55
PCCB-201ENST00000251654 PRDM15P57071 1507 aaPredicted RBP24.73■■□□□ 1.55
PCCB-201ENST00000251654 FAM69CQ0P6D2 419 aa24.72■■□□□ 1.55
PCCB-201ENST00000251654 ABCA6Q8N139 1617 aa24.72■■□□□ 1.55
PCCB-201ENST00000251654 FRMPD1Q5SYB0 1578 aa24.71■■□□□ 1.55
PCCB-201ENST00000251654 PLA2R1Q13018 1463 aa24.71■■□□□ 1.55
PCCB-201ENST00000251654 MYT1LQ9UL68 1186 aa24.7■■□□□ 1.55
PCCB-201ENST00000251654 KIF13AQ9H1H9 1805 aa24.7■■□□□ 1.54
PCCB-201ENST00000251654 A2MP01023 1474 aa24.7■■□□□ 1.54
PCCB-201ENST00000251654 TSPOAP1O95153 1857 aa24.69■■□□□ 1.54
PCCB-201ENST00000251654 ATP10AO60312 1499 aa24.69■■□□□ 1.54
PCCB-201ENST00000251654 E9PCH4 1651 aa24.69■■□□□ 1.54
PCCB-201ENST00000251654 RNF17Q9BXT8 1623 aaKnown RBP24.67■■□□□ 1.54
PCCB-201ENST00000251654 TET3O43151 1660 aa24.67■■□□□ 1.54
PCCB-201ENST00000251654 RAPGEF3O95398 923 aa24.67■■□□□ 1.54
PCCB-201ENST00000251654 BCORL1Q5H9F3 1711 aa24.66■■□□□ 1.54
PCCB-201ENST00000251654 KIF3BO15066 747 aa24.65■■□□□ 1.54
PCCB-201ENST00000251654 DIP2CQ9Y2E4 1556 aa24.65■■□□□ 1.54
PCCB-201ENST00000251654 CCDC144AA2RUR9 1427 aa24.63■■□□□ 1.53
PCCB-201ENST00000251654 ZMYM4Q5VZL5 1548 aa24.62■■□□□ 1.53
PCCB-201ENST00000251654 NBPF8Q3BBV2 869 aa24.61■■□□□ 1.53
PCCB-201ENST00000251654 KANK1Q14678 1352 aa24.6■■□□□ 1.53
PCCB-201ENST00000251654 SPHKAPQ2M3C7 1700 aa24.59■■□□□ 1.53
PCCB-201ENST00000251654 TRPM2O94759 1503 aa24.57■■□□□ 1.52
PCCB-201ENST00000251654 LMTK2Q8IWU2 1503 aa24.56■■□□□ 1.52
PCCB-201ENST00000251654 UHRF1BP1Q6BDS2 1440 aa24.56■■□□□ 1.52
PCCB-201ENST00000251654 EFCAB6Q5THR3 1501 aa24.56■■□□□ 1.52
PCCB-201ENST00000251654 YEATS2Q9ULM3 1422 aa24.55■■□□□ 1.52
PCCB-201ENST00000251654 CEP152O94986 1710 aa24.55■■□□□ 1.52
PCCB-201ENST00000251654 PTPRTO14522 1441 aa24.55■■□□□ 1.52
PCCB-201ENST00000251654 HIRIP3Q9BW71 556 aaPredicted RBP24.54■■□□□ 1.52
PCCB-201ENST00000251654 CLTCL1P53675 1640 aa24.49■■□□□ 1.51
PCCB-201ENST00000251654 RALGAPBQ86X10 1494 aa24.47■■□□□ 1.51
PCCB-201ENST00000251654 SPATA31E1Q6ZUB1 1445 aa24.47■■□□□ 1.51
PCCB-201ENST00000251654 ABCC3O15438 1527 aa24.46■■□□□ 1.51
PCCB-201ENST00000251654 HSPA5P11021 654 aaKnown RBP24.45■■□□□ 1.5
PCCB-201ENST00000251654 EIF4G2P78344 907 aaKnown RBP eCLIP24.45■■□□□ 1.5
PCCB-201ENST00000251654 MIER1Q8N108 512 aa24.45■■□□□ 1.5
PCCB-201ENST00000251654 DCAF11Q8TEB1 546 aa24.44■■□□□ 1.5
PCCB-201ENST00000251654 COL17A1Q9UMD9 1497 aaPredicted RBP24.43■■□□□ 1.5
PCCB-201ENST00000251654 REREQ9P2R6 1566 aa24.43■■□□□ 1.5
PCCB-201ENST00000251654 ZNF326Q5BKZ1 582 aaKnown RBP24.42■■□□□ 1.5
PCCB-201ENST00000251654 GGT6Q6P531 493 aa24.42■■□□□ 1.5
PCCB-201ENST00000251654 CAMSAP1Q5T5Y3 1602 aa24.41■■□□□ 1.5
PCCB-201ENST00000251654 PRAG1Q86YV5 1406 aa24.41■■□□□ 1.5
PCCB-201ENST00000251654 ZC3H13Q5T200 1668 aaKnown RBP24.41■■□□□ 1.5
PCCB-201ENST00000251654 NPATQ14207 1427 aa24.4■■□□□ 1.5
PCCB-201ENST00000251654 TRPM1Q7Z4N2 1603 aa24.4■■□□□ 1.5
PCCB-201ENST00000251654 NEURL4Q96JN8 1562 aa24.4■■□□□ 1.5
PCCB-201ENST00000251654 RGL3Q3MIN7 710 aa24.4■■□□□ 1.5
PCCB-201ENST00000251654 KDM2AQ9Y2K7 1162 aa24.39■■□□□ 1.49
PCCB-201ENST00000251654 UGGT1Q9NYU2 1555 aa24.38■■□□□ 1.49
PCCB-201ENST00000251654 ARHGEF40Q8TER5 1519 aa24.36■■□□□ 1.49
PCCB-201ENST00000251654 DDX10Q13206 875 aaKnown RBP24.35■■□□□ 1.49
PCCB-201ENST00000251654 WASHC2CQ9Y4E1 1318 aa24.35■■□□□ 1.49
PCCB-201ENST00000251654 POLR1AO95602 1720 aaPredicted RBP24.35■■□□□ 1.49
PCCB-201ENST00000251654 AGLP35573 1532 aa24.35■■□□□ 1.49
PCCB-201ENST00000251654 SIGLEC1Q9BZZ2 1709 aa24.34■■□□□ 1.49
PCCB-201ENST00000251654 USP47Q96K76 1375 aa24.33■■□□□ 1.49
PCCB-201ENST00000251654 KIF1BO60333 1816 aa24.33■■□□□ 1.49
PCCB-201ENST00000251654 CFAP65Q6ZU64 1925 aaKnown RBP24.32■■□□□ 1.48
PCCB-201ENST00000251654 WASHC2AQ641Q2 1341 aa24.32■■□□□ 1.48
PCCB-201ENST00000251654 MADDQ8WXG6 1647 aa24.31■■□□□ 1.48
PCCB-201ENST00000251654 ARHGAP31Q2M1Z3 1444 aa24.3■■□□□ 1.48
PCCB-201ENST00000251654 CNTLNQ9NXG0 1405 aa24.3■■□□□ 1.48
PCCB-201ENST00000251654 MROH2AA6NES4 1674 aa24.29■■□□□ 1.48
PCCB-201ENST00000251654 LAMC1P11047 1609 aa24.29■■□□□ 1.48
PCCB-201ENST00000251654 NOS1P29475 1434 aa24.28■■□□□ 1.48
PCCB-201ENST00000251654 ROCK2O75116 1388 aaKnown RBP24.27■■□□□ 1.48
PCCB-201ENST00000251654 GPRASP1Q5JY77 1395 aa24.27■■□□□ 1.48
PCCB-201ENST00000251654 IFT172Q9UG01 1749 aa24.27■■□□□ 1.48
PCCB-201ENST00000251654 ADGRB3O60242 1522 aa24.26■■□□□ 1.47
PCCB-201ENST00000251654 CARD11Q9BXL7 1154 aa24.26■■□□□ 1.47
PCCB-201ENST00000251654 SYNMO15061 1565 aa24.26■■□□□ 1.47
PCCB-201ENST00000251654 PIK3C2BO00750 1634 aa24.26■■□□□ 1.47
PCCB-201ENST00000251654 C11orf95C9JLR9 678 aaPredicted RBP24.25■■□□□ 1.47
PCCB-201ENST00000251654 CCDC7Q96M83 1385 aa24.24■■□□□ 1.47
PCCB-201ENST00000251654 STAC3Q96MF2 364 aa24.22■■□□□ 1.47
PCCB-201ENST00000251654 PREX1Q8TCU6 1659 aa24.21■■□□□ 1.47
PCCB-201ENST00000251654 MYOM2P54296 1465 aa24.2■■□□□ 1.47
PCCB-201ENST00000251654 NBPF1Q3BBV0 1214 aa24.2■■□□□ 1.46
PCCB-201ENST00000251654 KIF7Q2M1P5 1343 aa24.18■■□□□ 1.46
PCCB-201ENST00000251654 KIAA1210Q9ULL0 1709 aa24.17■■□□□ 1.46
PCCB-201ENST00000251654 CLTCQ00610 1675 aaKnown RBP24.16■■□□□ 1.46
PCCB-201ENST00000251654 PPP6R1Q9UPN7 881 aa24.16■■□□□ 1.46
PCCB-201ENST00000251654 PPLO60437 1756 aa24.15■■□□□ 1.46
PCCB-201ENST00000251654 NRXN1Q9ULB1 1477 aa24.14■■□□□ 1.46
PCCB-201ENST00000251654 IQGAP1P46940 1657 aa24.13■■□□□ 1.45
PCCB-201ENST00000251654 ST20-MTHFSA0A0A6YYL1 179 aa24.12■■□□□ 1.45
PCCB-201ENST00000251654 ARID4BQ4LE39 1312 aaPredicted RBP24.1■■□□□ 1.45
PCCB-201ENST00000251654 ERVK-7P63135 1459 aa24.1■■□□□ 1.45
PCCB-201ENST00000251654 DNAJC5Q9H3Z4 198 aa24.09■■□□□ 1.45
PCCB-201ENST00000251654 ADGRF5Q8IZF2 1346 aa24.07■■□□□ 1.44
PCCB-201ENST00000251654 TRHP20396 242 aaPredicted RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms