RNA–Protein interactions for RNA: ENST00000250066.6

USP6-201, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 7,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-201ENST00000250066 CCDC173Q0VFZ6 552 aa10.65□□□□□ -0.7
USP6-201ENST00000250066 CHMP4CQ96CF2 233 aa10.65□□□□□ -0.7
USP6-201ENST00000250066 HOOK1Q9UJC3 728 aaKnown RBP10.65□□□□□ -0.71
USP6-201ENST00000250066 KAT6BQ8WYB5 2073 aa10.65□□□□□ -0.71
USP6-201ENST00000250066 PMFBP1Q8TBY8 1022 aa10.64□□□□□ -0.71
USP6-201ENST00000250066 CCDC47Q96A33 483 aaKnown RBP10.64□□□□□ -0.71
USP6-201ENST00000250066 DDX49Q9Y6V7 483 aaKnown RBP10.63□□□□□ -0.71
USP6-201ENST00000250066 DYDC1Q8WWB3 177 aa10.63□□□□□ -0.71
USP6-201ENST00000250066 MYO6Q9UM54 1294 aa10.63□□□□□ -0.71
USP6-201ENST00000250066 TIMELESSQ9UNS1 1208 aa10.63□□□□□ -0.71
USP6-201ENST00000250066 HSP90AB2PQ58FF8 381 aa10.63□□□□□ -0.71
USP6-201ENST00000250066 ZFYVE27Q5T4F4 411 aa10.62□□□□□ -0.71
USP6-201ENST00000250066 SKOR2Q2VWA4 1001 aaPredicted RBP10.62□□□□□ -0.71
USP6-201ENST00000250066 KCNH8Q96L42 1107 aa10.62□□□□□ -0.71
USP6-201ENST00000250066 IPO9Q96P70 1041 aaKnown RBP10.62□□□□□ -0.71
USP6-201ENST00000250066 MCTP1Q6DN14 999 aa10.62□□□□□ -0.71
USP6-201ENST00000250066 SRPK2P78362 688 aaKnown RBP10.62□□□□□ -0.71
USP6-201ENST00000250066 MORC1Q86VD1 984 aa10.62□□□□□ -0.71
USP6-201ENST00000250066 DCAF1Q9Y4B6 1507 aa10.62□□□□□ -0.71
USP6-201ENST00000250066 FOXD4L6Q3SYB3 417 aaPredicted RBP10.61□□□□□ -0.71
USP6-201ENST00000250066 FOXD4L3Q6VB84 417 aaPredicted RBP10.61□□□□□ -0.71
USP6-201ENST00000250066 STK31Q9BXU1 1019 aa10.61□□□□□ -0.71
USP6-201ENST00000250066 CCDC66A2RUB6 948 aa10.61□□□□□ -0.71
USP6-201ENST00000250066 MNS1Q8NEH6 495 aa10.61□□□□□ -0.71
USP6-201ENST00000250066 TMF1P82094 1093 aa10.61□□□□□ -0.71
USP6-201ENST00000250066 SPAG9O60271 1321 aaKnown RBP10.61□□□□□ -0.71
USP6-201ENST00000250066 CCDC43Q96MW1 224 aaKnown RBP10.61□□□□□ -0.71
USP6-201ENST00000250066 TSPYL1Q9H0U9 437 aa10.6□□□□□ -0.71
USP6-201ENST00000250066 CTDP1Q9Y5B0 961 aaPredicted RBP10.6□□□□□ -0.71
USP6-201ENST00000250066 SYNE3Q6ZMZ3 975 aa10.6□□□□□ -0.71
USP6-201ENST00000250066 NEFHP12036 1026 aa10.6□□□□□ -0.71
USP6-201ENST00000250066 PAF1Q8N7H5 531 aa10.6□□□□□ -0.71
USP6-201ENST00000250066 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.59□□□□□ -0.71
USP6-201ENST00000250066 CPLX2Q6PUV4 134 aaKnown RBP10.59□□□□□ -0.71
USP6-201ENST00000250066 TRIM29Q14134 588 aa10.59□□□□□ -0.71
USP6-201ENST00000250066 EPS15P42566 896 aa10.59□□□□□ -0.71
USP6-201ENST00000250066 R3HCC1Q9Y3T6 440 aaKnown RBP10.59□□□□□ -0.71
USP6-201ENST00000250066 ERCC6Q03468 1493 aa10.59□□□□□ -0.71
USP6-201ENST00000250066 INCENPQ9NQS7 918 aa10.59□□□□□ -0.71
USP6-201ENST00000250066 GTF2E1P29083 439 aaPredicted RBP10.58□□□□□ -0.72
USP6-201ENST00000250066 RCAN3Q9UKA8 241 aa10.58□□□□□ -0.72
USP6-201ENST00000250066 ERCC4Q92889 916 aaPredicted RBP10.58□□□□□ -0.72
USP6-201ENST00000250066 TRIM34Q9BYJ4 488 aa10.58□□□□□ -0.72
USP6-201ENST00000250066 CAGE1Q8TC20 777 aa10.58□□□□□ -0.72
USP6-201ENST00000250066 GOLGA6L7A0A1B0GV03 622 aa10.57□□□□□ -0.72
USP6-201ENST00000250066 RAD21O60216 631 aa10.57□□□□□ -0.72
USP6-201ENST00000250066 LEKR1Q6ZMV7 388 aa10.57□□□□□ -0.72
USP6-201ENST00000250066 MTERF4Q7Z6M4 381 aaKnown RBP10.57□□□□□ -0.72
USP6-201ENST00000250066 OFD1O75665 1012 aa10.57□□□□□ -0.72
USP6-201ENST00000250066 CSB-PGBD3P0DP91 1061 aa10.57□□□□□ -0.72
USP6-201ENST00000250066 AMOTL1Q8IY63 956 aa10.57□□□□□ -0.72
USP6-201ENST00000250066 IFT57Q9NWB7 429 aa10.57□□□□□ -0.72
USP6-201ENST00000250066 SLC4A10Q6U841 1118 aa10.56□□□□□ -0.72
USP6-201ENST00000250066 PAK3O75914 559 aaPredicted RBP10.56□□□□□ -0.72
USP6-201ENST00000250066 HDGFP51858 240 aaKnown RBP10.56□□□□□ -0.72
USP6-201ENST00000250066 GSE1Q14687 1217 aa10.56□□□□□ -0.72
USP6-201ENST00000250066 SEPT7Q16181 437 aaKnown RBP10.56□□□□□ -0.72
USP6-201ENST00000250066 SKIDA1Q1XH10 827 aa10.56□□□□□ -0.72
USP6-201ENST00000250066 LRRFIP1Q32MZ4 808 aaKnown RBP10.55□□□□□ -0.72
USP6-201ENST00000250066 SMC4Q9NTJ3 1288 aa10.55□□□□□ -0.72
USP6-201ENST00000250066 ZCCHC6Q5VYS8 1495 aaKnown RBP10.55□□□□□ -0.72
USP6-201ENST00000250066 RSF1Q96T23 1441 aaPredicted RBP10.55□□□□□ -0.72
USP6-201ENST00000250066 DIAPH3Q9NSV4 1193 aa10.55□□□□□ -0.72
USP6-201ENST00000250066 CHMP7Q8WUX9 453 aaPredicted RBP10.55□□□□□ -0.72
USP6-201ENST00000250066 CLASRPQ8N2M8 674 aaKnown RBP10.55□□□□□ -0.72
USP6-201ENST00000250066 FAM43AQ8N2R8 423 aa10.55□□□□□ -0.72
USP6-201ENST00000250066 ANKRD62A6NC57 917 aa10.54□□□□□ -0.72
USP6-201ENST00000250066 PLEKHD1A6NEE1 506 aa10.54□□□□□ -0.72
USP6-201ENST00000250066 SASS6Q6UVJ0 657 aa10.54□□□□□ -0.72
USP6-201ENST00000250066 NOL10Q9BSC4 688 aaKnown RBP10.54□□□□□ -0.72
USP6-201ENST00000250066 ANKRD18AQ8IVF6 992 aa10.54□□□□□ -0.72
USP6-201ENST00000250066 KIAA0754O94854 1291 aa10.54□□□□□ -0.72
USP6-201ENST00000250066 AXDND1Q5T1B0 1012 aaPredicted RBP10.54□□□□□ -0.72
USP6-201ENST00000250066 RILPL2Q969X0 211 aa10.54□□□□□ -0.72
USP6-201ENST00000250066 U2AF1L5P0DN76 240 aaPredicted RBP10.53□□□□□ -0.72
USP6-201ENST00000250066 U2AF1Q01081 240 aaKnown RBP eCLIP10.53□□□□□ -0.72
USP6-201ENST00000250066 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.53□□□□□ -0.72
USP6-201ENST00000250066 TAF3Q5VWG9 929 aa10.53□□□□□ -0.72
USP6-201ENST00000250066 BICD2Q8TD16 824 aa10.53□□□□□ -0.72
USP6-201ENST00000250066 CT47B1P0C2W7 299 aaPredicted RBP10.53□□□□□ -0.72
USP6-201ENST00000250066 EZRP15311 586 aaKnown RBP10.53□□□□□ -0.72
USP6-201ENST00000250066 ENOX2Q16206 610 aaKnown RBP10.53□□□□□ -0.72
USP6-201ENST00000250066 BCL11BQ9C0K0 894 aaPredicted RBP10.53□□□□□ -0.72
USP6-201ENST00000250066 GOLGA6L10A6NI86 522 aa10.52□□□□□ -0.72
USP6-201ENST00000250066 HDGFL2Q7Z4V5 671 aaPredicted RBP10.52□□□□□ -0.73
USP6-201ENST00000250066 CWC22Q9HCG8 908 aaKnown RBP10.52□□□□□ -0.73
USP6-201ENST00000250066 ERLIN2O94905 339 aa10.52□□□□□ -0.73
USP6-201ENST00000250066 DHX16O60231 1041 aaKnown RBP10.52□□□□□ -0.73
USP6-201ENST00000250066 CPLX1O14810 134 aa10.51□□□□□ -0.73
USP6-201ENST00000250066 CCDC9Q9Y3X0 531 aaKnown RBP10.51□□□□□ -0.73
USP6-201ENST00000250066 KTN1Q86UP2 1357 aaKnown RBP10.51□□□□□ -0.73
USP6-201ENST00000250066 SAFB2Q14151 953 aaKnown RBP eCLIP10.51□□□□□ -0.73
USP6-201ENST00000250066 FBXW7Q969H0 707 aa10.5□□□□□ -0.73
USP6-201ENST00000250066 NAT10Q9H0A0 1025 aaKnown RBP10.5□□□□□ -0.73
USP6-201ENST00000250066 TTLL5Q6EMB2 1281 aa10.5□□□□□ -0.73
USP6-201ENST00000250066 NF2P35240 595 aa10.5□□□□□ -0.73
USP6-201ENST00000250066 CFDP1Q9UEE9 299 aaPredicted RBP10.5□□□□□ -0.73
USP6-201ENST00000250066 USP8P40818 1118 aa10.49□□□□□ -0.73
USP6-201ENST00000250066 DCAF11Q8TEB1 546 aa10.49□□□□□ -0.73
USP6-201ENST00000250066 PDILTQ8N807 584 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms