RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 CDCA7LQ96GN5 454 aa16.76■□□□□ 0.27
RAB3IP-201ENST00000247833 SMG6Q86US8 1419 aaKnown RBP16.76■□□□□ 0.27
RAB3IP-201ENST00000247833 ITSN2Q9NZM3 1697 aa16.76■□□□□ 0.27
RAB3IP-201ENST00000247833 RSPH4AQ5TD94 716 aa16.75■□□□□ 0.27
RAB3IP-201ENST00000247833 WDR43Q15061 677 aaKnown RBP eCLIP16.75■□□□□ 0.27
RAB3IP-201ENST00000247833 NOP58Q9Y2X3 529 aaKnown RBP16.75■□□□□ 0.27
RAB3IP-201ENST00000247833 KNSTRNQ9Y448 316 aa16.75■□□□□ 0.27
RAB3IP-201ENST00000247833 SENP3Q9H4L4 574 aaPredicted RBP16.73■□□□□ 0.27
RAB3IP-201ENST00000247833 ZBTB47Q9UFB7 747 aaPredicted RBP16.73■□□□□ 0.27
RAB3IP-201ENST00000247833 RRP1P56182 461 aaKnown RBP16.73■□□□□ 0.27
RAB3IP-201ENST00000247833 RTL5Q5HYW3 569 aaPredicted RBP16.73■□□□□ 0.27
RAB3IP-201ENST00000247833 ARHGAP5Q13017 1502 aa16.73■□□□□ 0.27
RAB3IP-201ENST00000247833 ADGRL2O95490 1459 aa16.72■□□□□ 0.27
RAB3IP-201ENST00000247833 EFCAB2Q5VUJ9 269 aa16.72■□□□□ 0.27
RAB3IP-201ENST00000247833 BRD4O60885 1362 aaPredicted RBP16.71■□□□□ 0.27
RAB3IP-201ENST00000247833 RALGAPBQ86X10 1494 aa16.7■□□□□ 0.26
RAB3IP-201ENST00000247833 NUP160Q12769 1436 aa16.7■□□□□ 0.26
RAB3IP-201ENST00000247833 CCDC141Q6ZP82 1450 aa16.7■□□□□ 0.26
RAB3IP-201ENST00000247833 AFAP1Q8N556 730 aa16.68■□□□□ 0.26
RAB3IP-201ENST00000247833 BCORL1Q5H9F3 1711 aa16.68■□□□□ 0.26
RAB3IP-201ENST00000247833 BCL11AQ9H165 835 aa16.68■□□□□ 0.26
RAB3IP-201ENST00000247833 PAK3O75914 559 aaPredicted RBP16.67■□□□□ 0.26
RAB3IP-201ENST00000247833 SPAG9O60271 1321 aaKnown RBP16.66■□□□□ 0.26
RAB3IP-201ENST00000247833 PLEKHH2Q8IVE3 1493 aa16.66■□□□□ 0.26
RAB3IP-201ENST00000247833 MBD5Q9P267 1494 aa16.66■□□□□ 0.26
RAB3IP-201ENST00000247833 ADGBQ8N7X0 1667 aa16.65■□□□□ 0.26
RAB3IP-201ENST00000247833 ABCC10Q5T3U5 1492 aa16.65■□□□□ 0.26
RAB3IP-201ENST00000247833 KIF3BO15066 747 aa16.64■□□□□ 0.25
RAB3IP-201ENST00000247833 DISP3Q9P2K9 1392 aa16.64■□□□□ 0.25
RAB3IP-201ENST00000247833 CCDC146Q8IYE0 955 aa16.64■□□□□ 0.25
RAB3IP-201ENST00000247833 UHRF1BP1Q6BDS2 1440 aa16.63■□□□□ 0.25
RAB3IP-201ENST00000247833 TNNT2P45379 298 aaPredicted RBP16.63■□□□□ 0.25
RAB3IP-201ENST00000247833 KDM5CP41229 1560 aa16.63■□□□□ 0.25
RAB3IP-201ENST00000247833 FAM135AQ9P2D6 1515 aa16.63■□□□□ 0.25
RAB3IP-201ENST00000247833 SKAP1Q86WV1 359 aa16.63■□□□□ 0.25
RAB3IP-201ENST00000247833 SYCP2Q9BX26 1530 aa16.62■□□□□ 0.25
RAB3IP-201ENST00000247833 ADAMTS8Q9UP79 889 aa16.62■□□□□ 0.25
RAB3IP-201ENST00000247833 DAXXQ9UER7 740 aaPredicted RBP16.62■□□□□ 0.25
RAB3IP-201ENST00000247833 LAS1LQ9Y4W2 734 aaKnown RBP16.61■□□□□ 0.25
RAB3IP-201ENST00000247833 CRBNQ96SW2 442 aa16.61■□□□□ 0.25
RAB3IP-201ENST00000247833 SHANK2Q9UPX8 1470 aa16.61■□□□□ 0.25
RAB3IP-201ENST00000247833 PDE3BQ13370 1112 aa16.6■□□□□ 0.25
RAB3IP-201ENST00000247833 PRAG1Q86YV5 1406 aa16.6■□□□□ 0.25
RAB3IP-201ENST00000247833 IPO9Q96P70 1041 aaKnown RBP16.6■□□□□ 0.25
RAB3IP-201ENST00000247833 NEUROD2Q15784 382 aa16.59■□□□□ 0.25
RAB3IP-201ENST00000247833 CDC42BPAQ5VT25 1732 aa16.59■□□□□ 0.25
RAB3IP-201ENST00000247833 DEKP35659 375 aaKnown RBP16.59■□□□□ 0.25
RAB3IP-201ENST00000247833 ABCA8O94911 1581 aa16.58■□□□□ 0.25
RAB3IP-201ENST00000247833 CANXP27824 592 aaKnown RBP16.58■□□□□ 0.25
RAB3IP-201ENST00000247833 CDCA8Q53HL2 280 aa16.58■□□□□ 0.25
RAB3IP-201ENST00000247833 ERBINQ96RT1 1412 aa16.58■□□□□ 0.25
RAB3IP-201ENST00000247833 TESK2Q96S53 571 aa16.58■□□□□ 0.24
RAB3IP-201ENST00000247833 PER1O15534 1290 aaPredicted RBP16.58■□□□□ 0.24
RAB3IP-201ENST00000247833 ARHGEF12Q9NZN5 1544 aa16.57■□□□□ 0.24
RAB3IP-201ENST00000247833 PDE4AP27815 886 aa16.56■□□□□ 0.24
RAB3IP-201ENST00000247833 RGS3P49796 1198 aa16.56■□□□□ 0.24
RAB3IP-201ENST00000247833 TCERG1O14776 1098 aaKnown RBP16.55■□□□□ 0.24
RAB3IP-201ENST00000247833 LRPPRCP42704 1394 aaKnown RBP16.55■□□□□ 0.24
RAB3IP-201ENST00000247833 PARD3Q8TEW0 1356 aa16.54■□□□□ 0.24
RAB3IP-201ENST00000247833 A2MP01023 1474 aa16.53■□□□□ 0.24
RAB3IP-201ENST00000247833 RNF123Q5XPI4 1314 aa16.53■□□□□ 0.24
RAB3IP-201ENST00000247833 PPP2R1AP30153 589 aa16.53■□□□□ 0.24
RAB3IP-201ENST00000247833 ADCY10Q96PN6 1610 aa16.53■□□□□ 0.24
RAB3IP-201ENST00000247833 CFAP70Q5T0N1 1121 aa16.52■□□□□ 0.24
RAB3IP-201ENST00000247833 C20orf194Q5TEA3 1177 aa16.52■□□□□ 0.24
RAB3IP-201ENST00000247833 CROCC2H7BZ55 1655 aa16.52■□□□□ 0.24
RAB3IP-201ENST00000247833 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.52■□□□□ 0.24
RAB3IP-201ENST00000247833 SAMD9LQ8IVG5 1584 aa16.52■□□□□ 0.24
RAB3IP-201ENST00000247833 GGT6Q6P531 493 aa16.52■□□□□ 0.23
RAB3IP-201ENST00000247833 KANK1Q14678 1352 aa16.52■□□□□ 0.23
RAB3IP-201ENST00000247833 GOLGA2Q08379 1002 aa16.51■□□□□ 0.23
RAB3IP-201ENST00000247833 APAF1O14727 1248 aa16.51■□□□□ 0.23
RAB3IP-201ENST00000247833 NUTM2DQ5VT03 806 aaPredicted RBP16.51■□□□□ 0.23
RAB3IP-201ENST00000247833 PLA2R1Q13018 1463 aa16.49■□□□□ 0.23
RAB3IP-201ENST00000247833 TRAK1Q9UPV9 953 aa16.48■□□□□ 0.23
RAB3IP-201ENST00000247833 SAFB2Q14151 953 aaKnown RBP eCLIP16.48■□□□□ 0.23
RAB3IP-201ENST00000247833 WASHC2CQ9Y4E1 1318 aa16.48■□□□□ 0.23
RAB3IP-201ENST00000247833 TRAPPC8Q9Y2L5 1435 aa16.48■□□□□ 0.23
RAB3IP-201ENST00000247833 NPM1P06748 294 aaKnown RBP eCLIP16.47■□□□□ 0.23
RAB3IP-201ENST00000247833 FRAT1Q92837 279 aaPredicted RBP16.47■□□□□ 0.23
RAB3IP-201ENST00000247833 NEFMP07197 916 aa16.46■□□□□ 0.23
RAB3IP-201ENST00000247833 ARHGEF5Q12774 1597 aa16.46■□□□□ 0.23
RAB3IP-201ENST00000247833 POLR1AO95602 1720 aaPredicted RBP16.46■□□□□ 0.22
RAB3IP-201ENST00000247833 SLC4A3P48751 1232 aa16.45■□□□□ 0.22
RAB3IP-201ENST00000247833 RRP7AQ9Y3A4 280 aaKnown RBP16.45■□□□□ 0.22
RAB3IP-201ENST00000247833 TTC37Q6PGP7 1564 aa16.45■□□□□ 0.22
RAB3IP-201ENST00000247833 KDM5DQ9BY66 1539 aa16.45■□□□□ 0.22
RAB3IP-201ENST00000247833 COL17A1Q9UMD9 1497 aaPredicted RBP16.44■□□□□ 0.22
RAB3IP-201ENST00000247833 SCAPERQ9BY12 1400 aa16.44■□□□□ 0.22
RAB3IP-201ENST00000247833 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.44■□□□□ 0.22
RAB3IP-201ENST00000247833 MORC1Q86VD1 984 aa16.43■□□□□ 0.22
RAB3IP-201ENST00000247833 EIF3AQ14152 1382 aaKnown RBP16.42■□□□□ 0.22
RAB3IP-201ENST00000247833 ERCC6L2Q5T890 1561 aa16.42■□□□□ 0.22
RAB3IP-201ENST00000247833 TMEM132EQ6IEE7 984 aa16.41■□□□□ 0.22
RAB3IP-201ENST00000247833 BACH2Q9BYV9 841 aa16.41■□□□□ 0.22
RAB3IP-201ENST00000247833 GPRASP1Q5JY77 1395 aa16.41■□□□□ 0.22
RAB3IP-201ENST00000247833 AMER1Q5JTC6 1135 aaPredicted RBP16.41■□□□□ 0.22
RAB3IP-201ENST00000247833 PLCH2O75038 1416 aa16.41■□□□□ 0.22
RAB3IP-201ENST00000247833 CDC42BPBQ9Y5S2 1711 aa16.41■□□□□ 0.22
RAB3IP-201ENST00000247833 ADGRF5Q8IZF2 1346 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms