RNA–Protein interactions for RNA: ENST00000243498.9

EXOSC9-201, Transcript of exosome component 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC9, Length 1,481 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-201ENST00000243498 MAP3K4Q9Y6R4 1608 aa13.5□□□□□ -0.25
EXOSC9-201ENST00000243498 HNRNPMP52272 730 aaKnown RBP eCLIP13.5□□□□□ -0.25
EXOSC9-201ENST00000243498 ANKRD30AQ9BXX3 1397 aa13.5□□□□□ -0.25
EXOSC9-201ENST00000243498 HFM1A2PYH4 1435 aa13.49□□□□□ -0.25
EXOSC9-201ENST00000243498 NEO1Q92859 1461 aa13.49□□□□□ -0.25
EXOSC9-201ENST00000243498 MBD5Q9P267 1494 aa13.49□□□□□ -0.25
EXOSC9-201ENST00000243498 ABCC1P33527 1531 aa13.49□□□□□ -0.25
EXOSC9-201ENST00000243498 CHIC2Q9UKJ5 165 aa13.48□□□□□ -0.25
EXOSC9-201ENST00000243498 PTPRKQ15262 1439 aa13.48□□□□□ -0.25
EXOSC9-201ENST00000243498 SYCP2Q9BX26 1530 aa13.48□□□□□ -0.25
EXOSC9-201ENST00000243498 ADGRL1O94910 1474 aa13.47□□□□□ -0.25
EXOSC9-201ENST00000243498 TEX14Q8IWB6 1497 aa13.47□□□□□ -0.25
EXOSC9-201ENST00000243498 GCC2Q8IWJ2 1684 aa13.47□□□□□ -0.25
EXOSC9-201ENST00000243498 ADGRL2O95490 1459 aa13.46□□□□□ -0.25
EXOSC9-201ENST00000243498 MAST1Q9Y2H9 1570 aa13.46□□□□□ -0.25
EXOSC9-201ENST00000243498 CCER1Q8TC90 406 aaPredicted RBP13.46□□□□□ -0.25
EXOSC9-201ENST00000243498 C9orf84Q5VXU9 1444 aa13.46□□□□□ -0.26
EXOSC9-201ENST00000243498 RRP7BPQ9NSQ0 103 aa13.45□□□□□ -0.26
EXOSC9-201ENST00000243498 RAB3GAP2Q9H2M9 1393 aa13.45□□□□□ -0.26
EXOSC9-201ENST00000243498 SCAPERQ9BY12 1400 aa13.45□□□□□ -0.26
EXOSC9-201ENST00000243498 NAIPQ13075 1403 aa13.44□□□□□ -0.26
EXOSC9-201ENST00000243498 KIF13AQ9H1H9 1805 aa13.44□□□□□ -0.26
EXOSC9-201ENST00000243498 RTEL1-TNFRSF6BF6WH68 1400 aa13.43□□□□□ -0.26
EXOSC9-201ENST00000243498 NCOA1Q15788 1441 aa13.43□□□□□ -0.26
EXOSC9-201ENST00000243498 ZEB1P37275 1124 aaPredicted RBP13.43□□□□□ -0.26
EXOSC9-201ENST00000243498 FARP1Q9Y4F1 1045 aaPredicted RBP13.43□□□□□ -0.26
EXOSC9-201ENST00000243498 TSPOAP1O95153 1857 aa13.42□□□□□ -0.26
EXOSC9-201ENST00000243498 SPAG9O60271 1321 aaKnown RBP13.42□□□□□ -0.26
EXOSC9-201ENST00000243498 MYT1LQ9UL68 1186 aa13.42□□□□□ -0.26
EXOSC9-201ENST00000243498 ARHGEF12Q9NZN5 1544 aa13.41□□□□□ -0.26
EXOSC9-201ENST00000243498 ZNF518AQ6AHZ1 1483 aa13.41□□□□□ -0.26
EXOSC9-201ENST00000243498 DENND4BO75064 1496 aaPredicted RBP13.4□□□□□ -0.26
EXOSC9-201ENST00000243498 CLSPNQ9HAW4 1339 aa13.4□□□□□ -0.26
EXOSC9-201ENST00000243498 TRAPPC8Q9Y2L5 1435 aa13.4□□□□□ -0.27
EXOSC9-201ENST00000243498 PLXNC1O60486 1568 aa13.39□□□□□ -0.27
EXOSC9-201ENST00000243498 AFAP1Q8N556 730 aa13.38□□□□□ -0.27
EXOSC9-201ENST00000243498 ANKRD50Q9ULJ7 1429 aa13.38□□□□□ -0.27
EXOSC9-201ENST00000243498 KIF15Q9NS87 1388 aa13.38□□□□□ -0.27
EXOSC9-201ENST00000243498 POGZQ7Z3K3 1410 aa13.36□□□□□ -0.27
EXOSC9-201ENST00000243498 TRIM52Q96A61 297 aa13.36□□□□□ -0.27
EXOSC9-201ENST00000243498 DUOX2Q9NRD8 1548 aa13.36□□□□□ -0.27
EXOSC9-201ENST00000243498 PPRC1Q5VV67 1664 aaKnown RBP13.36□□□□□ -0.27
EXOSC9-201ENST00000243498 ATP7AQ04656 1500 aa13.36□□□□□ -0.27
EXOSC9-201ENST00000243498 DHX57Q6P158 1386 aaKnown RBP13.35□□□□□ -0.27
EXOSC9-201ENST00000243498 MLH3Q9UHC1 1453 aa13.35□□□□□ -0.27
EXOSC9-201ENST00000243498 KDM5CP41229 1560 aa13.34□□□□□ -0.27
EXOSC9-201ENST00000243498 INO80Q9ULG1 1556 aaPredicted RBP13.34□□□□□ -0.27
EXOSC9-201ENST00000243498 CD44P16070 742 aaKnown RBP13.34□□□□□ -0.27
EXOSC9-201ENST00000243498 ZFYVE16Q7Z3T8 1539 aa13.33□□□□□ -0.27
EXOSC9-201ENST00000243498 ERBINQ96RT1 1412 aa13.33□□□□□ -0.27
EXOSC9-201ENST00000243498 HECW2Q9P2P5 1572 aa13.33□□□□□ -0.28
EXOSC9-201ENST00000243498 CREBZFQ9NS37 354 aa13.33□□□□□ -0.28
EXOSC9-201ENST00000243498 RICTORQ6R327 1708 aa13.32□□□□□ -0.28
EXOSC9-201ENST00000243498 MAGI2Q86UL8 1455 aa13.31□□□□□ -0.28
EXOSC9-201ENST00000243498 KIDINS220Q9ULH0 1771 aa13.31□□□□□ -0.28
EXOSC9-201ENST00000243498 RAPGEF3O95398 923 aa13.29□□□□□ -0.28
EXOSC9-201ENST00000243498 DHX29Q7Z478 1369 aaKnown RBP13.29□□□□□ -0.28
EXOSC9-201ENST00000243498 KDM6BO15054 1643 aa13.29□□□□□ -0.28
EXOSC9-201ENST00000243498 EIF2AK4Q9P2K8 1649 aaKnown RBP13.29□□□□□ -0.28
EXOSC9-201ENST00000243498 GABBR2O75899 941 aa13.29□□□□□ -0.28
EXOSC9-201ENST00000243498 ZMYM4Q5VZL5 1548 aa13.28□□□□□ -0.28
EXOSC9-201ENST00000243498 PROM2Q8N271 834 aa13.28□□□□□ -0.28
EXOSC9-201ENST00000243498 MPHOSPH9Q99550 1183 aa13.28□□□□□ -0.28
EXOSC9-201ENST00000243498 A2MP01023 1474 aa13.27□□□□□ -0.29
EXOSC9-201ENST00000243498 NUP155O75694 1391 aa13.27□□□□□ -0.29
EXOSC9-201ENST00000243498 KDM5DQ9BY66 1539 aa13.25□□□□□ -0.29
EXOSC9-201ENST00000243498 UNC13BO14795 1591 aa13.25□□□□□ -0.29
EXOSC9-201ENST00000243498 KANK1Q14678 1352 aa13.25□□□□□ -0.29
EXOSC9-201ENST00000243498 FRMPD1Q5SYB0 1578 aa13.23□□□□□ -0.29
EXOSC9-201ENST00000243498 KIF3BO15066 747 aa13.23□□□□□ -0.29
EXOSC9-201ENST00000243498 CLCN6P51797 869 aa13.23□□□□□ -0.29
EXOSC9-201ENST00000243498 ABCA6Q8N139 1617 aa13.22□□□□□ -0.29
EXOSC9-201ENST00000243498 DIP2CQ9Y2E4 1556 aa13.22□□□□□ -0.29
EXOSC9-201ENST00000243498 TIMELESSQ9UNS1 1208 aa13.22□□□□□ -0.29
EXOSC9-201ENST00000243498 ATP10AO60312 1499 aa13.21□□□□□ -0.29
EXOSC9-201ENST00000243498 BCORL1Q5H9F3 1711 aa13.21□□□□□ -0.3
EXOSC9-201ENST00000243498 IQGAP3Q86VI3 1631 aa13.21□□□□□ -0.3
EXOSC9-201ENST00000243498 DEPDC5O75140 1603 aa13.2□□□□□ -0.3
EXOSC9-201ENST00000243498 REREQ9P2R6 1566 aa13.2□□□□□ -0.3
EXOSC9-201ENST00000243498 PZPP20742 1482 aa13.2□□□□□ -0.3
EXOSC9-201ENST00000243498 FAM135AQ9P2D6 1515 aa13.19□□□□□ -0.3
EXOSC9-201ENST00000243498 PKD2Q13563 968 aa13.17□□□□□ -0.3
EXOSC9-201ENST00000243498 YEATS2Q9ULM3 1422 aa13.17□□□□□ -0.3
EXOSC9-201ENST00000243498 RNF17Q9BXT8 1623 aaKnown RBP13.17□□□□□ -0.3
EXOSC9-201ENST00000243498 COL17A1Q9UMD9 1497 aaPredicted RBP13.17□□□□□ -0.3
EXOSC9-201ENST00000243498 PRDM15P57071 1507 aaPredicted RBP13.16□□□□□ -0.3
EXOSC9-201ENST00000243498 AGLP35573 1532 aa13.15□□□□□ -0.3
EXOSC9-201ENST00000243498 ARHGEF40Q8TER5 1519 aa13.15□□□□□ -0.3
EXOSC9-201ENST00000243498 GGT6Q6P531 493 aa13.15□□□□□ -0.3
EXOSC9-201ENST00000243498 ZNF579Q8NAF0 562 aaKnown RBP13.15□□□□□ -0.3
EXOSC9-201ENST00000243498 ZRANB1Q9UGI0 708 aa13.15□□□□□ -0.3
EXOSC9-201ENST00000243498 TET3O43151 1660 aa13.14□□□□□ -0.31
EXOSC9-201ENST00000243498 PAK3O75914 559 aaPredicted RBP13.14□□□□□ -0.31
EXOSC9-201ENST00000243498 NEUROD1Q13562 356 aa13.14□□□□□ -0.31
EXOSC9-201ENST00000243498 TONSLQ96HA7 1378 aa13.13□□□□□ -0.31
EXOSC9-201ENST00000243498 ANKRD30BQ9BXX2 1392 aa13.13□□□□□ -0.31
EXOSC9-201ENST00000243498 VWDEQ8N2E2 1590 aa13.13□□□□□ -0.31
EXOSC9-201ENST00000243498 ZC3H13Q5T200 1668 aaKnown RBP13.13□□□□□ -0.31
EXOSC9-201ENST00000243498 SIN3AQ96ST3 1273 aa13.12□□□□□ -0.31
EXOSC9-201ENST00000243498 WASHC2CQ9Y4E1 1318 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms