RNA–Protein interactions for RNA: ENST00000242848.8

ZC3H13-201, Transcript of zinc finger CCCH-type containing 13, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZC3H13, Length 8,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H13-201ENST00000242848 CAPN15O75808 1086 aa9.57□□□□□ -0.88
ZC3H13-201ENST00000242848 LTV1Q96GA3 475 aaPredicted RBP9.57□□□□□ -0.88
ZC3H13-201ENST00000242848 NEBLO76041 1014 aa9.57□□□□□ -0.88
ZC3H13-201ENST00000242848 AKAP17AQ02040 695 aaKnown RBP9.57□□□□□ -0.88
ZC3H13-201ENST00000242848 GRIPAP1Q4V328 841 aa9.57□□□□□ -0.88
ZC3H13-201ENST00000242848 ZFYVE27Q5T4F4 411 aa9.57□□□□□ -0.88
ZC3H13-201ENST00000242848 CT47A1Q5JQC4 288 aaPredicted RBP9.56□□□□□ -0.88
ZC3H13-201ENST00000242848 NOL8Q76FK4 1167 aaKnown RBP9.56□□□□□ -0.88
ZC3H13-201ENST00000242848 CIZ1Q9ULV3 898 aaPredicted RBP9.56□□□□□ -0.88
ZC3H13-201ENST00000242848 PSME1Q06323 249 aa9.55□□□□□ -0.88
ZC3H13-201ENST00000242848 PES1O00541 588 aaKnown RBP9.55□□□□□ -0.88
ZC3H13-201ENST00000242848 HINFPQ9BQA5 517 aa9.55□□□□□ -0.88
ZC3H13-201ENST00000242848 USP35Q9P2H5 1018 aa9.55□□□□□ -0.88
ZC3H13-201ENST00000242848 CHIC2Q9UKJ5 165 aa9.55□□□□□ -0.88
ZC3H13-201ENST00000242848 KIAA1211Q6ZU35 1233 aa9.55□□□□□ -0.88
ZC3H13-201ENST00000242848 NOC2LQ9Y3T9 749 aaKnown RBP9.55□□□□□ -0.88
ZC3H13-201ENST00000242848 PATL2C9JE40 543 aaKnown RBP9.55□□□□□ -0.88
ZC3H13-201ENST00000242848 TNNT3P45378 269 aaPredicted RBP9.54□□□□□ -0.88
ZC3H13-201ENST00000242848 CDCA8Q53HL2 280 aa9.54□□□□□ -0.88
ZC3H13-201ENST00000242848 TTC16Q8NEE8 873 aa9.54□□□□□ -0.88
ZC3H13-201ENST00000242848 GPATCH3Q96I76 525 aa9.54□□□□□ -0.88
ZC3H13-201ENST00000242848 C1orf141Q5JVX7 400 aa9.54□□□□□ -0.88
ZC3H13-201ENST00000242848 AMPHP49418 695 aa9.53□□□□□ -0.88
ZC3H13-201ENST00000242848 DNAI2Q9GZS0 605 aa9.53□□□□□ -0.88
ZC3H13-201ENST00000242848 SMC4Q9NTJ3 1288 aa9.53□□□□□ -0.88
ZC3H13-201ENST00000242848 NBPF8Q3BBV2 869 aa9.53□□□□□ -0.88
ZC3H13-201ENST00000242848 NBPF14Q5TI25 921 aa9.53□□□□□ -0.88
ZC3H13-201ENST00000242848 HOMER2Q9NSB8 354 aa9.52□□□□□ -0.89
ZC3H13-201ENST00000242848 NUTM2FA1L443 756 aa9.52□□□□□ -0.89
ZC3H13-201ENST00000242848 CHMP4BQ9H444 224 aaKnown RBP9.52□□□□□ -0.89
ZC3H13-201ENST00000242848 DRC7Q8IY82 874 aa9.51□□□□□ -0.89
ZC3H13-201ENST00000242848 TTC5Q8N0Z6 440 aa9.51□□□□□ -0.89
ZC3H13-201ENST00000242848 SPAG9O60271 1321 aaKnown RBP9.51□□□□□ -0.89
ZC3H13-201ENST00000242848 HMGN5P82970 282 aaKnown RBP9.51□□□□□ -0.89
ZC3H13-201ENST00000242848 SCLT1Q96NL6 688 aa9.51□□□□□ -0.89
ZC3H13-201ENST00000242848 SSFA2P28290 1259 aa9.5□□□□□ -0.89
ZC3H13-201ENST00000242848 POLD1P28340 1107 aa9.5□□□□□ -0.89
ZC3H13-201ENST00000242848 GPR162Q16538 588 aa9.5□□□□□ -0.89
ZC3H13-201ENST00000242848 HSP90B1P14625 803 aaKnown RBP9.5□□□□□ -0.89
ZC3H13-201ENST00000242848 HDAC5Q9UQL6 1122 aa9.49□□□□□ -0.89
ZC3H13-201ENST00000242848 NGEFQ8N5V2 710 aa9.49□□□□□ -0.89
ZC3H13-201ENST00000242848 LPXNO60711 386 aa9.49□□□□□ -0.89
ZC3H13-201ENST00000242848 MCCP23508 829 aa9.49□□□□□ -0.89
ZC3H13-201ENST00000242848 TPM2P07951 284 aa9.49□□□□□ -0.89
ZC3H13-201ENST00000242848 HDGFL2Q7Z4V5 671 aaPredicted RBP9.49□□□□□ -0.89
ZC3H13-201ENST00000242848 ZBTB33Q86T24 672 aa9.49□□□□□ -0.89
ZC3H13-201ENST00000242848 KNSTRNQ9Y448 316 aa9.48□□□□□ -0.89
ZC3H13-201ENST00000242848 ATP2B2Q01814 1243 aa9.48□□□□□ -0.89
ZC3H13-201ENST00000242848 HSP90AB4PQ58FF6 505 aa9.48□□□□□ -0.89
ZC3H13-201ENST00000242848 TPD52L1Q16890 204 aaPredicted RBP9.48□□□□□ -0.89
ZC3H13-201ENST00000242848 MATR3P43243 847 aaKnown RBP eCLIP9.47□□□□□ -0.89
ZC3H13-201ENST00000242848 SKIV2LQ15477 1246 aaKnown RBP9.47□□□□□ -0.89
ZC3H13-201ENST00000242848 RDXP35241 583 aaKnown RBP9.47□□□□□ -0.89
ZC3H13-201ENST00000242848 BCL11BQ9C0K0 894 aaPredicted RBP9.47□□□□□ -0.89
ZC3H13-201ENST00000242848 RGS22Q8NE09 1264 aa9.46□□□□□ -0.89
ZC3H13-201ENST00000242848 STRN4Q9NRL3 753 aa9.46□□□□□ -0.89
ZC3H13-201ENST00000242848 PRKAG2Q9UGJ0 569 aa9.46□□□□□ -0.89
ZC3H13-201ENST00000242848 TMOD2Q9NZR1 351 aa9.46□□□□□ -0.89
ZC3H13-201ENST00000242848 HNRNPMP52272 730 aaKnown RBP eCLIP9.46□□□□□ -0.9
ZC3H13-201ENST00000242848 TSR1Q2NL82 804 aaKnown RBP9.46□□□□□ -0.9
ZC3H13-201ENST00000242848 GOLGA6L1Q8N7Z2 621 aa9.46□□□□□ -0.9
ZC3H13-201ENST00000242848 SYNE3Q6ZMZ3 975 aa9.46□□□□□ -0.9
ZC3H13-201ENST00000242848 ZSCAN29Q8IWY8 852 aaPredicted RBP9.46□□□□□ -0.9
ZC3H13-201ENST00000242848 MYO10Q9HD67 2058 aa9.45□□□□□ -0.9
ZC3H13-201ENST00000242848 LMOD1P29536 600 aaPredicted RBP9.45□□□□□ -0.9
ZC3H13-201ENST00000242848 ZNF219Q9P2Y4 722 aaPredicted RBP9.45□□□□□ -0.9
ZC3H13-201ENST00000242848 CCDC27Q2M243 656 aa9.45□□□□□ -0.9
ZC3H13-201ENST00000242848 NGLY1Q96IV0 654 aa9.45□□□□□ -0.9
ZC3H13-201ENST00000242848 HDAC9Q9UKV0 1011 aa9.45□□□□□ -0.9
ZC3H13-201ENST00000242848 GOLGA6L3A6NEY3 463 aa9.44□□□□□ -0.9
ZC3H13-201ENST00000242848 DESP17661 470 aa9.44□□□□□ -0.9
ZC3H13-201ENST00000242848 FYB1O15117 783 aa9.44□□□□□ -0.9
ZC3H13-201ENST00000242848 NF2P35240 595 aa9.44□□□□□ -0.9
ZC3H13-201ENST00000242848 HOMER1Q86YM7 354 aa9.44□□□□□ -0.9
ZC3H13-201ENST00000242848 MYO9BQ13459 2157 aa9.43□□□□□ -0.9
ZC3H13-201ENST00000242848 ECM2O94769 699 aaPredicted RBP9.43□□□□□ -0.9
ZC3H13-201ENST00000242848 DMRT2Q9Y5R5 561 aa9.43□□□□□ -0.9
ZC3H13-201ENST00000242848 BMS1Q14692 1282 aaKnown RBP9.42□□□□□ -0.9
ZC3H13-201ENST00000242848 TONSLQ96HA7 1378 aa9.42□□□□□ -0.9
ZC3H13-201ENST00000242848 LRRFIP1Q32MZ4 808 aaKnown RBP9.42□□□□□ -0.9
ZC3H13-201ENST00000242848 PDIA4P13667 645 aaKnown RBP9.42□□□□□ -0.9
ZC3H13-201ENST00000242848 PDE4AP27815 886 aa9.42□□□□□ -0.9
ZC3H13-201ENST00000242848 UBAP1LF5GYI3 381 aa9.41□□□□□ -0.9
ZC3H13-201ENST00000242848 EPS15P42566 896 aa9.41□□□□□ -0.9
ZC3H13-201ENST00000242848 TAF12Q16514 161 aa9.41□□□□□ -0.9
ZC3H13-201ENST00000242848 FAM9BQ8IZU0 186 aa9.41□□□□□ -0.9
ZC3H13-201ENST00000242848 XPCQ01831 940 aaPredicted RBP9.41□□□□□ -0.9
ZC3H13-201ENST00000242848 PABPN1LA6NDY0 278 aaKnown RBP9.4□□□□□ -0.9
ZC3H13-201ENST00000242848 CCDC47Q96A33 483 aaKnown RBP9.4□□□□□ -0.9
ZC3H13-201ENST00000242848 BCL2L13Q9BXK5 485 aa9.4□□□□□ -0.9
ZC3H13-201ENST00000242848 PSMD1Q99460 953 aa9.4□□□□□ -0.9
ZC3H13-201ENST00000242848 STK31Q9BXU1 1019 aa9.4□□□□□ -0.9
ZC3H13-201ENST00000242848 MTMR7Q9Y216 660 aa9.4□□□□□ -0.9
ZC3H13-201ENST00000242848 CALD1Q05682 793 aaKnown RBP9.4□□□□□ -0.91
ZC3H13-201ENST00000242848 ARHGEF6Q15052 776 aa9.4□□□□□ -0.91
ZC3H13-201ENST00000242848 BCCIPQ9P287 314 aaKnown RBP eCLIP9.4□□□□□ -0.91
ZC3H13-201ENST00000242848 FAM177BA6PVY3 158 aa9.39□□□□□ -0.91
ZC3H13-201ENST00000242848 CCDC112Q8NEF3 446 aa9.39□□□□□ -0.91
ZC3H13-201ENST00000242848 MINK1Q8N4C8 1332 aaPredicted RBP9.39□□□□□ -0.91
ZC3H13-201ENST00000242848 MRPS9P82933 396 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 810 ms