RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 PRM3Q9NNZ6 103 aa8.33□□□□□ -1.08
CSMD2-201ENST00000241312 PDE4CQ08493 712 aa8.33□□□□□ -1.08
CSMD2-201ENST00000241312 TEX35Q5T0J7 233 aa8.33□□□□□ -1.08
CSMD2-201ENST00000241312 TMX4Q9H1E5 349 aaPredicted RBP8.33□□□□□ -1.08
CSMD2-201ENST00000241312 CCDC18Q5T9S5 1454 aa8.32□□□□□ -1.08
CSMD2-201ENST00000241312 SLC4A3P48751 1232 aa8.32□□□□□ -1.08
CSMD2-201ENST00000241312 GOLGA6L19H0YKK7 550 aa8.32□□□□□ -1.08
CSMD2-201ENST00000241312 H3BQV1 296 aa8.31□□□□□ -1.08
CSMD2-201ENST00000241312 IFFO2Q5TF58 517 aa8.31□□□□□ -1.08
CSMD2-201ENST00000241312 CARMIL2Q6F5E8 1435 aa8.31□□□□□ -1.08
CSMD2-201ENST00000241312 CENPQQ7L2Z9 268 aaPredicted RBP8.31□□□□□ -1.08
CSMD2-201ENST00000241312 CHMP3Q9Y3E7 222 aa8.31□□□□□ -1.08
CSMD2-201ENST00000241312 NUP155O75694 1391 aa8.31□□□□□ -1.08
CSMD2-201ENST00000241312 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.31□□□□□ -1.08
CSMD2-201ENST00000241312 IPO7O95373 1038 aaKnown RBP8.31□□□□□ -1.08
CSMD2-201ENST00000241312 TPM2P07951 284 aa8.31□□□□□ -1.08
CSMD2-201ENST00000241312 SF3A1Q15459 793 aaKnown RBP8.31□□□□□ -1.08
CSMD2-201ENST00000241312 BECN2A8MW95 431 aa8.3□□□□□ -1.08
CSMD2-201ENST00000241312 FAM161AQ3B820 660 aa8.3□□□□□ -1.08
CSMD2-201ENST00000241312 CREBRFQ8IUR6 639 aa8.3□□□□□ -1.08
CSMD2-201ENST00000241312 SMARCA2P51531 1590 aa8.3□□□□□ -1.08
CSMD2-201ENST00000241312 CCDC146Q8IYE0 955 aa8.3□□□□□ -1.08
CSMD2-201ENST00000241312 CCAR2Q8N163 923 aaKnown RBP8.3□□□□□ -1.08
CSMD2-201ENST00000241312 ZBED9Q6R2W3 1325 aa8.3□□□□□ -1.08
CSMD2-201ENST00000241312 ABCC8Q09428 1581 aa8.3□□□□□ -1.08
CSMD2-201ENST00000241312 TAF7LQ5H9L4 462 aa8.3□□□□□ -1.08
CSMD2-201ENST00000241312 ZNF330Q9Y3S2 320 aaPredicted RBP8.3□□□□□ -1.08
CSMD2-201ENST00000241312 REC8O95072 547 aa8.3□□□□□ -1.08
CSMD2-201ENST00000241312 UACAQ9BZF9 1416 aa8.29□□□□□ -1.08
CSMD2-201ENST00000241312 CGNL1Q0VF96 1302 aa8.29□□□□□ -1.08
CSMD2-201ENST00000241312 GSE1Q14687 1217 aa8.29□□□□□ -1.08
CSMD2-201ENST00000241312 TPD52L1Q16890 204 aaPredicted RBP8.29□□□□□ -1.08
CSMD2-201ENST00000241312 PES1O00541 588 aaKnown RBP8.29□□□□□ -1.08
CSMD2-201ENST00000241312 CALRP27797 417 aaKnown RBP8.29□□□□□ -1.08
CSMD2-201ENST00000241312 ANKRD20A12PQ8NF67 263 aa8.29□□□□□ -1.08
CSMD2-201ENST00000241312 STK26Q9P289 416 aa8.29□□□□□ -1.08
CSMD2-201ENST00000241312 DDX49Q9Y6V7 483 aaKnown RBP8.28□□□□□ -1.08
CSMD2-201ENST00000241312 CSB-PGBD3P0DP91 1061 aa8.28□□□□□ -1.08
CSMD2-201ENST00000241312 ZNF771Q7L3S4 317 aaPredicted RBP8.28□□□□□ -1.08
CSMD2-201ENST00000241312 MYBBP1AQ9BQG0 1328 aaKnown RBP8.28□□□□□ -1.08
CSMD2-201ENST00000241312 SOGA1O94964 1423 aa8.28□□□□□ -1.08
CSMD2-201ENST00000241312 FOXD4L6Q3SYB3 417 aaPredicted RBP8.28□□□□□ -1.08
CSMD2-201ENST00000241312 FOXD4L3Q6VB84 417 aaPredicted RBP8.28□□□□□ -1.08
CSMD2-201ENST00000241312 ANO8Q9HCE9 1232 aaPredicted RBP8.28□□□□□ -1.08
CSMD2-201ENST00000241312 LRRFIP1Q32MZ4 808 aaKnown RBP8.28□□□□□ -1.08
CSMD2-201ENST00000241312 ROCK1Q13464 1354 aa8.28□□□□□ -1.08
CSMD2-201ENST00000241312 VPS53Q5VIR6 699 aa8.27□□□□□ -1.08
CSMD2-201ENST00000241312 TOMM22Q9NS69 142 aa8.27□□□□□ -1.09
CSMD2-201ENST00000241312 HOOK1Q9UJC3 728 aaKnown RBP8.27□□□□□ -1.09
CSMD2-201ENST00000241312 CLUAP1Q96AJ1 413 aa8.27□□□□□ -1.09
CSMD2-201ENST00000241312 NOM1Q5C9Z4 860 aaKnown RBP8.27□□□□□ -1.09
CSMD2-201ENST00000241312 DIAPH3Q9NSV4 1193 aa8.27□□□□□ -1.09
CSMD2-201ENST00000241312 PAK3O75914 559 aaPredicted RBP8.27□□□□□ -1.09
CSMD2-201ENST00000241312 AKAP17AQ02040 695 aaKnown RBP8.27□□□□□ -1.09
CSMD2-201ENST00000241312 FANCIQ9NVI1 1328 aa8.26□□□□□ -1.09
CSMD2-201ENST00000241312 MTERF4Q7Z6M4 381 aaKnown RBP8.26□□□□□ -1.09
CSMD2-201ENST00000241312 VSIG10Q8N0Z9 540 aa8.26□□□□□ -1.09
CSMD2-201ENST00000241312 ACBD3Q9H3P7 528 aa8.26□□□□□ -1.09
CSMD2-201ENST00000241312 MARCH6O60337 910 aa8.26□□□□□ -1.09
CSMD2-201ENST00000241312 SLC4A10Q6U841 1118 aa8.26□□□□□ -1.09
CSMD2-201ENST00000241312 CCDC144AA2RUR9 1427 aa8.26□□□□□ -1.09
CSMD2-201ENST00000241312 ARGLU1Q9NWB6 273 aaPredicted RBP8.26□□□□□ -1.09
CSMD2-201ENST00000241312 RUFY2Q8WXA3 655 aa8.25□□□□□ -1.09
CSMD2-201ENST00000241312 MPHOSPH9Q99550 1183 aa8.25□□□□□ -1.09
CSMD2-201ENST00000241312 MCTP1Q6DN14 999 aa8.25□□□□□ -1.09
CSMD2-201ENST00000241312 FAM184AQ8NB25 1140 aa8.25□□□□□ -1.09
CSMD2-201ENST00000241312 AK7Q96M32 723 aa8.25□□□□□ -1.09
CSMD2-201ENST00000241312 PLIN1O60240 522 aa8.25□□□□□ -1.09
CSMD2-201ENST00000241312 CDR1P51861 262 aa8.25□□□□□ -1.09
CSMD2-201ENST00000241312 ZKSCAN1P17029 563 aaPredicted RBP8.24□□□□□ -1.09
CSMD2-201ENST00000241312 KANK4Q5T7N3 995 aaPredicted RBP8.24□□□□□ -1.09
CSMD2-201ENST00000241312 ZKSCAN2Q63HK3 967 aa8.24□□□□□ -1.09
CSMD2-201ENST00000241312 E9PSI1 815 aa8.24□□□□□ -1.09
CSMD2-201ENST00000241312 PDE4AP27815 886 aa8.24□□□□□ -1.09
CSMD2-201ENST00000241312 TCEAL9Q9UHQ7 104 aa8.24□□□□□ -1.09
CSMD2-201ENST00000241312 RRP1P56182 461 aaKnown RBP8.24□□□□□ -1.09
CSMD2-201ENST00000241312 RRP12Q5JTH9 1297 aaKnown RBP8.24□□□□□ -1.09
CSMD2-201ENST00000241312 ZNF592Q92610 1267 aa8.23□□□□□ -1.09
CSMD2-201ENST00000241312 MLECQ14165 292 aa8.23□□□□□ -1.09
CSMD2-201ENST00000241312 HSP90B2PQ58FF3 399 aa8.23□□□□□ -1.09
CSMD2-201ENST00000241312 CPLX2Q6PUV4 134 aaKnown RBP8.23□□□□□ -1.09
CSMD2-201ENST00000241312 FAM43AQ8N2R8 423 aa8.23□□□□□ -1.09
CSMD2-201ENST00000241312 RUFY1Q96T51 708 aa8.23□□□□□ -1.09
CSMD2-201ENST00000241312 USP47Q96K76 1375 aa8.23□□□□□ -1.09
CSMD2-201ENST00000241312 HOMER1Q86YM7 354 aa8.23□□□□□ -1.09
CSMD2-201ENST00000241312 NGEFQ8N5V2 710 aa8.23□□□□□ -1.09
CSMD2-201ENST00000241312 SYNE3Q6ZMZ3 975 aa8.22□□□□□ -1.09
CSMD2-201ENST00000241312 FAM13BQ9NYF5 915 aa8.22□□□□□ -1.09
CSMD2-201ENST00000241312 CWC15Q9P013 229 aaKnown RBP8.22□□□□□ -1.09
CSMD2-201ENST00000241312 CPLX1O14810 134 aa8.22□□□□□ -1.09
CSMD2-201ENST00000241312 BCL11BQ9C0K0 894 aaPredicted RBP8.22□□□□□ -1.09
CSMD2-201ENST00000241312 RRP7AQ9Y3A4 280 aaKnown RBP8.22□□□□□ -1.09
CSMD2-201ENST00000241312 PATL2C9JE40 543 aaKnown RBP8.22□□□□□ -1.09
CSMD2-201ENST00000241312 FRAT2O75474 233 aaPredicted RBP8.22□□□□□ -1.09
CSMD2-201ENST00000241312 TOP2AP11388 1531 aaKnown RBP8.22□□□□□ -1.09
CSMD2-201ENST00000241312 AAMPQ13685 434 aa8.22□□□□□ -1.09
CSMD2-201ENST00000241312 DDX19BQ9UMR2 479 aa8.22□□□□□ -1.09
CSMD2-201ENST00000241312 CCDC9Q9Y3X0 531 aaKnown RBP8.22□□□□□ -1.09
CSMD2-201ENST00000241312 RNF20Q5VTR2 975 aa8.21□□□□□ -1.09
CSMD2-201ENST00000241312 TRIM29Q14134 588 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms