RNA–Protein interactions for RNA: ENST00000239852.10

MTRF1-201, Transcript of mitochondrial translation release factor 1, humanhuman

TSL 1 (best)

Gene MTRF1, Length 1,561 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTRF1-201ENST00000239852 SENP3-EIF4A1A0A087X0R7 540 aa11.58□□□□□ -0.56
MTRF1-201ENST00000239852 MEX3CQ5U5Q3 659 aaKnown RBP11.57□□□□□ -0.56
MTRF1-201ENST00000239852 ANKLE2Q86XL3 938 aa11.57□□□□□ -0.56
MTRF1-201ENST00000239852 STRCP1A6NGW2 1772 aa11.57□□□□□ -0.56
MTRF1-201ENST00000239852 ATAD2Q6PL18 1390 aa11.56□□□□□ -0.56
MTRF1-201ENST00000239852 KDM5CP41229 1560 aa11.55□□□□□ -0.56
MTRF1-201ENST00000239852 PLEKHD1A6NEE1 506 aa11.55□□□□□ -0.56
MTRF1-201ENST00000239852 NUTM2BA6NNL0 878 aaPredicted RBP11.55□□□□□ -0.56
MTRF1-201ENST00000239852 NUTM2EB1AL46 878 aaPredicted RBP11.55□□□□□ -0.56
MTRF1-201ENST00000239852 NUTM2DQ5VT03 806 aaPredicted RBP11.55□□□□□ -0.56
MTRF1-201ENST00000239852 NUTM2AQ8IVF1 878 aaPredicted RBP11.55□□□□□ -0.56
MTRF1-201ENST00000239852 MYT1LQ9UL68 1186 aa11.55□□□□□ -0.56
MTRF1-201ENST00000239852 MED14O60244 1454 aa11.55□□□□□ -0.56
MTRF1-201ENST00000239852 NPHP4O75161 1426 aaPredicted RBP11.55□□□□□ -0.56
MTRF1-201ENST00000239852 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.55□□□□□ -0.56
MTRF1-201ENST00000239852 RGS12O14924 1447 aa11.54□□□□□ -0.56
MTRF1-201ENST00000239852 SPATA31A6Q5VVP1 1343 aa11.54□□□□□ -0.56
MTRF1-201ENST00000239852 BCANQ96GW7 911 aa11.54□□□□□ -0.56
MTRF1-201ENST00000239852 PLCH2O75038 1416 aa11.53□□□□□ -0.56
MTRF1-201ENST00000239852 LRP6O75581 1613 aa11.53□□□□□ -0.56
MTRF1-201ENST00000239852 KLHL34Q8N239 644 aa11.53□□□□□ -0.56
MTRF1-201ENST00000239852 ROBO1Q9Y6N7 1651 aa11.52□□□□□ -0.57
MTRF1-201ENST00000239852 ABCA6Q8N139 1617 aa11.52□□□□□ -0.57
MTRF1-201ENST00000239852 AFAP1Q8N556 730 aa11.51□□□□□ -0.57
MTRF1-201ENST00000239852 MLH3Q9UHC1 1453 aa11.5□□□□□ -0.57
MTRF1-201ENST00000239852 EFCAB2Q5VUJ9 269 aa11.5□□□□□ -0.57
MTRF1-201ENST00000239852 CCDC125Q86Z20 511 aa11.5□□□□□ -0.57
MTRF1-201ENST00000239852 DEPDC5O75140 1603 aa11.5□□□□□ -0.57
MTRF1-201ENST00000239852 PODXL2Q9NZ53 605 aa11.5□□□□□ -0.57
MTRF1-201ENST00000239852 RBM6P78332 1123 aaKnown RBP11.48□□□□□ -0.57
MTRF1-201ENST00000239852 IQGAP1P46940 1657 aa11.47□□□□□ -0.57
MTRF1-201ENST00000239852 CTTNBP2Q8WZ74 1663 aa11.47□□□□□ -0.57
MTRF1-201ENST00000239852 FGD6Q6ZV73 1430 aa11.47□□□□□ -0.57
MTRF1-201ENST00000239852 PHLPP1O60346 1717 aa11.46□□□□□ -0.57
MTRF1-201ENST00000239852 LRRC9Q6ZRR7 1453 aa11.46□□□□□ -0.57
MTRF1-201ENST00000239852 NHSL1Q5SYE7 1610 aa11.46□□□□□ -0.58
MTRF1-201ENST00000239852 XIRP1Q702N8 1843 aaKnown RBP11.46□□□□□ -0.58
MTRF1-201ENST00000239852 NUP153P49790 1475 aaKnown RBP11.46□□□□□ -0.58
MTRF1-201ENST00000239852 THEMISQ8N1K5 641 aaPredicted RBP11.45□□□□□ -0.58
MTRF1-201ENST00000239852 KDM5DQ9BY66 1539 aa11.45□□□□□ -0.58
MTRF1-201ENST00000239852 EP400Q96L91 3159 aa11.45□□□□□ -0.58
MTRF1-201ENST00000239852 CLTCQ00610 1675 aaKnown RBP11.45□□□□□ -0.58
MTRF1-201ENST00000239852 CSRNP3Q8WYN3 585 aa11.45□□□□□ -0.58
MTRF1-201ENST00000239852 ABCC1P33527 1531 aa11.44□□□□□ -0.58
MTRF1-201ENST00000239852 AFF2P51816 1311 aa11.44□□□□□ -0.58
MTRF1-201ENST00000239852 SLC34A2O95436 690 aa11.43□□□□□ -0.58
MTRF1-201ENST00000239852 HOXD11P31277 338 aaPredicted RBP11.43□□□□□ -0.58
MTRF1-201ENST00000239852 QTRT2Q9H974 415 aaKnown RBP11.41□□□□□ -0.58
MTRF1-201ENST00000239852 C1QTNF8P60827 252 aa11.41□□□□□ -0.58
MTRF1-201ENST00000239852 NGLY1Q96IV0 654 aa11.41□□□□□ -0.58
MTRF1-201ENST00000239852 CEP350Q5VT06 3117 aa11.4□□□□□ -0.58
MTRF1-201ENST00000239852 COL16A1Q07092 1604 aaPredicted RBP11.4□□□□□ -0.58
MTRF1-201ENST00000239852 P3H3Q8IVL6 736 aa11.4□□□□□ -0.58
MTRF1-201ENST00000239852 PCDH10Q9P2E7 1040 aa11.39□□□□□ -0.59
MTRF1-201ENST00000239852 NWD1Q149M9 1564 aa11.39□□□□□ -0.59
MTRF1-201ENST00000239852 ITSN2Q9NZM3 1697 aa11.39□□□□□ -0.59
MTRF1-201ENST00000239852 TNRQ92752 1358 aa11.39□□□□□ -0.59
MTRF1-201ENST00000239852 FAM135AQ9P2D6 1515 aa11.38□□□□□ -0.59
MTRF1-201ENST00000239852 HRCP23327 699 aa11.38□□□□□ -0.59
MTRF1-201ENST00000239852 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
MTRF1-201ENST00000239852 SHPRHQ149N8 1683 aa11.37□□□□□ -0.59
MTRF1-201ENST00000239852 MYO5CQ9NQX4 1742 aa11.36□□□□□ -0.59
MTRF1-201ENST00000239852 NPM2Q86SE8 214 aaKnown RBP11.36□□□□□ -0.59
MTRF1-201ENST00000239852 TMEM94Q12767 1356 aa11.36□□□□□ -0.59
MTRF1-201ENST00000239852 KIDINS220Q9ULH0 1771 aa11.35□□□□□ -0.59
MTRF1-201ENST00000239852 ATP7AQ04656 1500 aa11.35□□□□□ -0.59
MTRF1-201ENST00000239852 UGGT1Q9NYU2 1555 aa11.34□□□□□ -0.59
MTRF1-201ENST00000239852 ZNF784Q8NCA9 323 aaPredicted RBP11.34□□□□□ -0.59
MTRF1-201ENST00000239852 SLAIN2Q9P270 581 aa11.34□□□□□ -0.59
MTRF1-201ENST00000239852 GTF3C3Q9Y5Q9 886 aa11.34□□□□□ -0.59
MTRF1-201ENST00000239852 ZC3H13Q5T200 1668 aaKnown RBP11.34□□□□□ -0.59
MTRF1-201ENST00000239852 NLRP1Q9C000 1473 aa11.33□□□□□ -0.6
MTRF1-201ENST00000239852 TPRNQ4KMQ1 711 aa11.33□□□□□ -0.6
MTRF1-201ENST00000239852 BCL9LQ86UU0 1499 aa11.32□□□□□ -0.6
MTRF1-201ENST00000239852 KIF14Q15058 1648 aa11.31□□□□□ -0.6
MTRF1-201ENST00000239852 ARHGAP5Q13017 1502 aa11.31□□□□□ -0.6
MTRF1-201ENST00000239852 BLMP54132 1417 aaPredicted RBP11.31□□□□□ -0.6
MTRF1-201ENST00000239852 MAP3K1Q13233 1512 aa11.3□□□□□ -0.6
MTRF1-201ENST00000239852 GGT6Q6P531 493 aa11.3□□□□□ -0.6
MTRF1-201ENST00000239852 PSDA5PKW4 1024 aaPredicted RBP11.29□□□□□ -0.6
MTRF1-201ENST00000239852 FBXO31Q5XUX0 539 aaPredicted RBP11.29□□□□□ -0.6
MTRF1-201ENST00000239852 PPP4R3CPQ6ZMV5 832 aa11.29□□□□□ -0.6
MTRF1-201ENST00000239852 PLEKHG5O94827 1062 aa11.28□□□□□ -0.6
MTRF1-201ENST00000239852 DEFB132Q7Z7B7 95 aa11.28□□□□□ -0.6
MTRF1-201ENST00000239852 C8orf37Q96NL8 207 aa11.28□□□□□ -0.6
MTRF1-201ENST00000239852 MIA2Q96PC5 1412 aa11.27□□□□□ -0.61
MTRF1-201ENST00000239852 MSH6P52701 1360 aa11.27□□□□□ -0.61
MTRF1-201ENST00000239852 SAMD9Q5K651 1589 aa11.27□□□□□ -0.61
MTRF1-201ENST00000239852 PZPP20742 1482 aa11.26□□□□□ -0.61
MTRF1-201ENST00000239852 AHDC1Q5TGY3 1603 aaPredicted RBP11.26□□□□□ -0.61
MTRF1-201ENST00000239852 PROSER2Q86WR7 435 aaPredicted RBP11.25□□□□□ -0.61
MTRF1-201ENST00000239852 PLXNC1O60486 1568 aa11.25□□□□□ -0.61
MTRF1-201ENST00000239852 ABCC3O15438 1527 aa11.25□□□□□ -0.61
MTRF1-201ENST00000239852 SCAF11Q99590 1463 aaKnown RBP11.24□□□□□ -0.61
MTRF1-201ENST00000239852 SF3B2Q13435 895 aaKnown RBP11.24□□□□□ -0.61
MTRF1-201ENST00000239852 TIAM1Q13009 1591 aa11.23□□□□□ -0.61
MTRF1-201ENST00000239852 KCNA6P17658 529 aa11.23□□□□□ -0.61
MTRF1-201ENST00000239852 UBE2Q2Q8WVN8 375 aa11.23□□□□□ -0.61
MTRF1-201ENST00000239852 TRPC5Q9UL62 973 aaPredicted RBP11.23□□□□□ -0.61
MTRF1-201ENST00000239852 DIP2AQ14689 1571 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms