RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 PODXL2Q9NZ53 605 aa11.92□□□□□ -0.5
NUDCD1-201ENST00000239690 ISY1Q9ULR0 285 aaKnown RBP11.92□□□□□ -0.5
NUDCD1-201ENST00000239690 ANKRD30AQ9BXX3 1397 aa11.92□□□□□ -0.5
NUDCD1-201ENST00000239690 EIF3AQ14152 1382 aaKnown RBP11.92□□□□□ -0.5
NUDCD1-201ENST00000239690 ESPNB1AK53 854 aa11.91□□□□□ -0.5
NUDCD1-201ENST00000239690 ZRSR1Q15695 479 aaKnown RBP11.91□□□□□ -0.5
NUDCD1-201ENST00000239690 POGKQ9P215 609 aa11.91□□□□□ -0.5
NUDCD1-201ENST00000239690 MCCP23508 829 aa11.91□□□□□ -0.5
NUDCD1-201ENST00000239690 SMC4Q9NTJ3 1288 aa11.9□□□□□ -0.5
NUDCD1-201ENST00000239690 C22orf23Q9BZE7 217 aa11.9□□□□□ -0.51
NUDCD1-201ENST00000239690 GOLGA6L6A8MZA4 724 aa11.89□□□□□ -0.51
NUDCD1-201ENST00000239690 DRC7Q8IY82 874 aa11.89□□□□□ -0.51
NUDCD1-201ENST00000239690 R3HCC1Q9Y3T6 440 aaKnown RBP11.89□□□□□ -0.51
NUDCD1-201ENST00000239690 EIF4G1Q04637 1599 aaKnown RBP11.89□□□□□ -0.51
NUDCD1-201ENST00000239690 MYOM3Q5VTT5 1437 aa11.89□□□□□ -0.51
NUDCD1-201ENST00000239690 NRDCO43847 1150 aa11.89□□□□□ -0.51
NUDCD1-201ENST00000239690 NASPP49321 788 aaPredicted RBP11.89□□□□□ -0.51
NUDCD1-201ENST00000239690 A0A0U1RQG5 324 aaPredicted RBP11.89□□□□□ -0.51
NUDCD1-201ENST00000239690 APAF1O14727 1248 aa11.88□□□□□ -0.51
NUDCD1-201ENST00000239690 NGEFQ8N5V2 710 aa11.88□□□□□ -0.51
NUDCD1-201ENST00000239690 SYNJ1O43426 1573 aa11.88□□□□□ -0.51
NUDCD1-201ENST00000239690 GOLGA6L4A6NEF3 574 aa11.88□□□□□ -0.51
NUDCD1-201ENST00000239690 ZMYND15Q9H091 742 aa11.88□□□□□ -0.51
NUDCD1-201ENST00000239690 PRXQ9BXM0 1461 aa11.88□□□□□ -0.51
NUDCD1-201ENST00000239690 HFM1A2PYH4 1435 aa11.88□□□□□ -0.51
NUDCD1-201ENST00000239690 PHF14O94880 888 aa11.87□□□□□ -0.51
NUDCD1-201ENST00000239690 GRPEL1Q9HAV7 217 aa11.87□□□□□ -0.51
NUDCD1-201ENST00000239690 WASHC2CQ9Y4E1 1318 aa11.87□□□□□ -0.51
NUDCD1-201ENST00000239690 U2AF1L5P0DN76 240 aaPredicted RBP11.87□□□□□ -0.51
NUDCD1-201ENST00000239690 MCM4P33991 863 aa11.87□□□□□ -0.51
NUDCD1-201ENST00000239690 U2AF1Q01081 240 aaKnown RBP eCLIP11.87□□□□□ -0.51
NUDCD1-201ENST00000239690 AAMPQ13685 434 aa11.87□□□□□ -0.51
NUDCD1-201ENST00000239690 NBPF8Q3BBV2 869 aa11.87□□□□□ -0.51
NUDCD1-201ENST00000239690 CHMP7Q8WUX9 453 aaPredicted RBP11.87□□□□□ -0.51
NUDCD1-201ENST00000239690 ST18O60284 1047 aa11.86□□□□□ -0.51
NUDCD1-201ENST00000239690 BCL2L13Q9BXK5 485 aa11.86□□□□□ -0.51
NUDCD1-201ENST00000239690 IGF1RP08069 1367 aa11.86□□□□□ -0.51
NUDCD1-201ENST00000239690 CCDC173Q0VFZ6 552 aa11.85□□□□□ -0.51
NUDCD1-201ENST00000239690 CUX1P39880 1505 aa11.85□□□□□ -0.51
NUDCD1-201ENST00000239690 TIAM1Q13009 1591 aa11.85□□□□□ -0.51
NUDCD1-201ENST00000239690 KIAA1211Q6ZU35 1233 aa11.85□□□□□ -0.51
NUDCD1-201ENST00000239690 ZKSCAN2Q63HK3 967 aa11.85□□□□□ -0.51
NUDCD1-201ENST00000239690 ATAD2BQ9ULI0 1458 aa11.84□□□□□ -0.51
NUDCD1-201ENST00000239690 RBM10P98175 930 aaKnown RBP11.84□□□□□ -0.51
NUDCD1-201ENST00000239690 TNNT3P45378 269 aaPredicted RBP11.84□□□□□ -0.51
NUDCD1-201ENST00000239690 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.83□□□□□ -0.52
NUDCD1-201ENST00000239690 MIA2Q96PC5 1412 aa11.83□□□□□ -0.52
NUDCD1-201ENST00000239690 ADAMTS8Q9UP79 889 aa11.83□□□□□ -0.52
NUDCD1-201ENST00000239690 MAPKBP1O60336 1514 aa11.82□□□□□ -0.52
NUDCD1-201ENST00000239690 CASKIN1Q8WXD9 1431 aa11.82□□□□□ -0.52
NUDCD1-201ENST00000239690 ZNF771Q7L3S4 317 aaPredicted RBP11.82□□□□□ -0.52
NUDCD1-201ENST00000239690 PANK1Q8TE04 598 aa11.82□□□□□ -0.52
NUDCD1-201ENST00000239690 STAG3Q9UJ98 1225 aa11.82□□□□□ -0.52
NUDCD1-201ENST00000239690 NUCB2P80303 420 aa11.81□□□□□ -0.52
NUDCD1-201ENST00000239690 SKAP1Q86WV1 359 aa11.81□□□□□ -0.52
NUDCD1-201ENST00000239690 PDCL3Q9H2J4 239 aa11.81□□□□□ -0.52
NUDCD1-201ENST00000239690 RRP7AQ9Y3A4 280 aaKnown RBP11.81□□□□□ -0.52
NUDCD1-201ENST00000239690 APBB1O00213 710 aa11.81□□□□□ -0.52
NUDCD1-201ENST00000239690 PDE3AQ14432 1141 aa11.81□□□□□ -0.52
NUDCD1-201ENST00000239690 HAP1P54257 671 aaPredicted RBP11.8□□□□□ -0.52
NUDCD1-201ENST00000239690 CCDC39Q9UFE4 941 aa11.8□□□□□ -0.52
NUDCD1-201ENST00000239690 DDX19BQ9UMR2 479 aa11.8□□□□□ -0.52
NUDCD1-201ENST00000239690 NCOA2Q15596 1464 aa11.8□□□□□ -0.52
NUDCD1-201ENST00000239690 NCOA1Q15788 1441 aa11.79□□□□□ -0.52
NUDCD1-201ENST00000239690 CLCN1P35523 988 aa11.79□□□□□ -0.52
NUDCD1-201ENST00000239690 FOXD4L5Q5VV16 416 aaPredicted RBP11.79□□□□□ -0.52
NUDCD1-201ENST00000239690 FOXD4L4Q8WXT5 416 aaPredicted RBP11.79□□□□□ -0.52
NUDCD1-201ENST00000239690 ANKRD45Q5TZF3 282 aa11.79□□□□□ -0.52
NUDCD1-201ENST00000239690 FYCO1Q9BQS8 1478 aa11.79□□□□□ -0.52
NUDCD1-201ENST00000239690 DZIP1LQ8IYY4 767 aaKnown RBP11.79□□□□□ -0.52
NUDCD1-201ENST00000239690 CCDC144AA2RUR9 1427 aa11.79□□□□□ -0.52
NUDCD1-201ENST00000239690 MCTP1Q6DN14 999 aa11.78□□□□□ -0.52
NUDCD1-201ENST00000239690 ZSCAN30Q86W11 494 aa11.78□□□□□ -0.52
NUDCD1-201ENST00000239690 PDZRN3Q9UPQ7 1066 aa11.78□□□□□ -0.52
NUDCD1-201ENST00000239690 KCNJ4P48050 445 aa11.78□□□□□ -0.52
NUDCD1-201ENST00000239690 KIF16BQ96L93 1317 aa11.77□□□□□ -0.52
NUDCD1-201ENST00000239690 NAIPQ13075 1403 aa11.77□□□□□ -0.53
NUDCD1-201ENST00000239690 HMGN5P82970 282 aaKnown RBP11.76□□□□□ -0.53
NUDCD1-201ENST00000239690 TDRD9Q8NDG6 1382 aaKnown RBP11.76□□□□□ -0.53
NUDCD1-201ENST00000239690 CAVIN1Q6NZI2 390 aaKnown RBP11.75□□□□□ -0.53
NUDCD1-201ENST00000239690 CIZ1Q9ULV3 898 aaPredicted RBP11.75□□□□□ -0.53
NUDCD1-201ENST00000239690 UQCRHLA0A096LP55 91 aa11.75□□□□□ -0.53
NUDCD1-201ENST00000239690 UQCRHP07919 91 aa11.75□□□□□ -0.53
NUDCD1-201ENST00000239690 DIAPH3Q9NSV4 1193 aa11.75□□□□□ -0.53
NUDCD1-201ENST00000239690 BCAR3O75815 825 aa11.74□□□□□ -0.53
NUDCD1-201ENST00000239690 NOL8Q76FK4 1167 aaKnown RBP11.74□□□□□ -0.53
NUDCD1-201ENST00000239690 C20orf194Q5TEA3 1177 aa11.74□□□□□ -0.53
NUDCD1-201ENST00000239690 LNPKQ9C0E8 428 aa11.74□□□□□ -0.53
NUDCD1-201ENST00000239690 MAP3K1Q13233 1512 aa11.73□□□□□ -0.53
NUDCD1-201ENST00000239690 NINLQ9Y2I6 1382 aa11.73□□□□□ -0.53
NUDCD1-201ENST00000239690 FGD1P98174 961 aa11.72□□□□□ -0.53
NUDCD1-201ENST00000239690 RNF214Q8ND24 703 aa11.72□□□□□ -0.53
NUDCD1-201ENST00000239690 TOP2BQ02880 1626 aa11.72□□□□□ -0.53
NUDCD1-201ENST00000239690 HMMRO75330 724 aa11.72□□□□□ -0.53
NUDCD1-201ENST00000239690 XRCC6P12956 609 aaKnown RBP eCLIP11.72□□□□□ -0.53
NUDCD1-201ENST00000239690 SENP3Q9H4L4 574 aaPredicted RBP11.72□□□□□ -0.53
NUDCD1-201ENST00000239690 REC8O95072 547 aa11.71□□□□□ -0.53
NUDCD1-201ENST00000239690 CFTRP13569 1480 aa11.71□□□□□ -0.53
NUDCD1-201ENST00000239690 HTATSF1O43719 755 aaKnown RBP11.71□□□□□ -0.53
NUDCD1-201ENST00000239690 PPP2R1AP30153 589 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms