RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 HECW2Q9P2P5 1572 aa21.93■■□□□ 1.1
HDHD3-201ENST00000238379 PPRC1Q5VV67 1664 aaKnown RBP21.93■■□□□ 1.1
HDHD3-201ENST00000238379 RICTORQ6R327 1708 aa21.9■■□□□ 1.1
HDHD3-201ENST00000238379 KIF13AQ9H1H9 1805 aa21.9■■□□□ 1.1
HDHD3-201ENST00000238379 DEPDC5O75140 1603 aa21.9■■□□□ 1.1
HDHD3-201ENST00000238379 EIF2AK4Q9P2K8 1649 aaKnown RBP21.89■■□□□ 1.1
HDHD3-201ENST00000238379 TEX14Q8IWB6 1497 aa21.89■■□□□ 1.1
HDHD3-201ENST00000238379 TSPOAP1O95153 1857 aa21.88■■□□□ 1.09
HDHD3-201ENST00000238379 A2MP01023 1474 aa21.88■■□□□ 1.09
HDHD3-201ENST00000238379 KIF3BO15066 747 aa21.87■■□□□ 1.09
HDHD3-201ENST00000238379 L3MBTL2Q969R5 705 aa21.86■■□□□ 1.09
HDHD3-201ENST00000238379 FRMPD1Q5SYB0 1578 aa21.85■■□□□ 1.09
HDHD3-201ENST00000238379 ABCA6Q8N139 1617 aa21.85■■□□□ 1.09
HDHD3-201ENST00000238379 VWDEQ8N2E2 1590 aa21.83■■□□□ 1.09
HDHD3-201ENST00000238379 MROH1Q8NDA8 1641 aa21.82■■□□□ 1.08
HDHD3-201ENST00000238379 PRDM15P57071 1507 aaPredicted RBP21.82■■□□□ 1.08
HDHD3-201ENST00000238379 PLA2R1Q13018 1463 aa21.81■■□□□ 1.08
HDHD3-201ENST00000238379 DIP2CQ9Y2E4 1556 aa21.81■■□□□ 1.08
HDHD3-201ENST00000238379 KANK1Q14678 1352 aa21.8■■□□□ 1.08
HDHD3-201ENST00000238379 ZMYM4Q5VZL5 1548 aa21.8■■□□□ 1.08
HDHD3-201ENST00000238379 ATP10AO60312 1499 aa21.79■■□□□ 1.08
HDHD3-201ENST00000238379 RNF17Q9BXT8 1623 aaKnown RBP21.78■■□□□ 1.08
HDHD3-201ENST00000238379 YEATS2Q9ULM3 1422 aa21.78■■□□□ 1.08
HDHD3-201ENST00000238379 BCORL1Q5H9F3 1711 aa21.78■■□□□ 1.08
HDHD3-201ENST00000238379 TET3O43151 1660 aa21.76■■□□□ 1.07
HDHD3-201ENST00000238379 E9PCH4 1651 aa21.75■■□□□ 1.07
HDHD3-201ENST00000238379 CCDC144AA2RUR9 1427 aa21.75■■□□□ 1.07
HDHD3-201ENST00000238379 DIEXFQ68CQ4 756 aaKnown RBP21.73■■□□□ 1.07
HDHD3-201ENST00000238379 COL17A1Q9UMD9 1497 aaPredicted RBP21.73■■□□□ 1.07
HDHD3-201ENST00000238379 LMTK2Q8IWU2 1503 aa21.72■■□□□ 1.07
HDHD3-201ENST00000238379 NBPF8Q3BBV2 869 aa21.71■■□□□ 1.07
HDHD3-201ENST00000238379 PTPRTO14522 1441 aa21.7■■□□□ 1.06
HDHD3-201ENST00000238379 DNAJC5Q9H3Z4 198 aa21.69■■□□□ 1.06
HDHD3-201ENST00000238379 GGT6Q6P531 493 aa21.69■■□□□ 1.06
HDHD3-201ENST00000238379 EFCAB6Q5THR3 1501 aa21.67■■□□□ 1.06
HDHD3-201ENST00000238379 TRPM2O94759 1503 aa21.66■■□□□ 1.06
HDHD3-201ENST00000238379 CEP152O94986 1710 aa21.65■■□□□ 1.06
HDHD3-201ENST00000238379 SPHKAPQ2M3C7 1700 aa21.65■■□□□ 1.06
HDHD3-201ENST00000238379 UHRF1BP1Q6BDS2 1440 aa21.63■■□□□ 1.05
HDHD3-201ENST00000238379 REREQ9P2R6 1566 aa21.63■■□□□ 1.05
HDHD3-201ENST00000238379 ABCC3O15438 1527 aa21.62■■□□□ 1.05
HDHD3-201ENST00000238379 WASHC2CQ9Y4E1 1318 aa21.61■■□□□ 1.05
HDHD3-201ENST00000238379 DCAF11Q8TEB1 546 aa21.6■■□□□ 1.05
HDHD3-201ENST00000238379 SPATA31E1Q6ZUB1 1445 aa21.59■■□□□ 1.05
HDHD3-201ENST00000238379 AGLP35573 1532 aa21.59■■□□□ 1.05
HDHD3-201ENST00000238379 RGL3Q3MIN7 710 aa21.59■■□□□ 1.05
HDHD3-201ENST00000238379 HIRIP3Q9BW71 556 aaPredicted RBP21.59■■□□□ 1.05
HDHD3-201ENST00000238379 NPATQ14207 1427 aa21.58■■□□□ 1.05
HDHD3-201ENST00000238379 CLTCL1P53675 1640 aa21.58■■□□□ 1.05
HDHD3-201ENST00000238379 ARHGEF40Q8TER5 1519 aa21.57■■□□□ 1.04
HDHD3-201ENST00000238379 KDM2AQ9Y2K7 1162 aa21.57■■□□□ 1.04
HDHD3-201ENST00000238379 ZNF326Q5BKZ1 582 aaKnown RBP21.56■■□□□ 1.04
HDHD3-201ENST00000238379 CAMSAP1Q5T5Y3 1602 aa21.55■■□□□ 1.04
HDHD3-201ENST00000238379 HSPA5P11021 654 aaKnown RBP21.55■■□□□ 1.04
HDHD3-201ENST00000238379 TRHP20396 242 aaPredicted RBP21.55■■□□□ 1.04
HDHD3-201ENST00000238379 EIF4G2P78344 907 aaKnown RBP eCLIP21.55■■□□□ 1.04
HDHD3-201ENST00000238379 ZC3H13Q5T200 1668 aaKnown RBP21.54■■□□□ 1.04
HDHD3-201ENST00000238379 RALGAPBQ86X10 1494 aa21.53■■□□□ 1.04
HDHD3-201ENST00000238379 ARHGAP31Q2M1Z3 1444 aa21.53■■□□□ 1.04
HDHD3-201ENST00000238379 SIGLEC1Q9BZZ2 1709 aa21.52■■□□□ 1.04
HDHD3-201ENST00000238379 PRAG1Q86YV5 1406 aa21.52■■□□□ 1.03
HDHD3-201ENST00000238379 UGGT1Q9NYU2 1555 aa21.51■■□□□ 1.03
HDHD3-201ENST00000238379 NEURL4Q96JN8 1562 aa21.51■■□□□ 1.03
HDHD3-201ENST00000238379 CNTLNQ9NXG0 1405 aa21.5■■□□□ 1.03
HDHD3-201ENST00000238379 NOS1P29475 1434 aa21.49■■□□□ 1.03
HDHD3-201ENST00000238379 PPP6R1Q9UPN7 881 aa21.49■■□□□ 1.03
HDHD3-201ENST00000238379 CFAP65Q6ZU64 1925 aaKnown RBP21.46■■□□□ 1.03
HDHD3-201ENST00000238379 STAC3Q96MF2 364 aa21.45■■□□□ 1.02
HDHD3-201ENST00000238379 TRPM1Q7Z4N2 1603 aa21.44■■□□□ 1.02
HDHD3-201ENST00000238379 KIF1BO60333 1816 aa21.44■■□□□ 1.02
HDHD3-201ENST00000238379 USP47Q96K76 1375 aa21.42■■□□□ 1.02
HDHD3-201ENST00000238379 CARD11Q9BXL7 1154 aa21.42■■□□□ 1.02
HDHD3-201ENST00000238379 SYNMO15061 1565 aa21.42■■□□□ 1.02
HDHD3-201ENST00000238379 MIER1Q8N108 512 aa21.41■■□□□ 1.02
HDHD3-201ENST00000238379 ADGRB3O60242 1522 aa21.41■■□□□ 1.02
HDHD3-201ENST00000238379 DDX10Q13206 875 aaKnown RBP21.41■■□□□ 1.02
HDHD3-201ENST00000238379 ROCK2O75116 1388 aaKnown RBP21.4■■□□□ 1.02
HDHD3-201ENST00000238379 PIK3C2BO00750 1634 aa21.4■■□□□ 1.02
HDHD3-201ENST00000238379 GPRASP1Q5JY77 1395 aa21.4■■□□□ 1.02
HDHD3-201ENST00000238379 MLECQ14165 292 aa21.39■■□□□ 1.02
HDHD3-201ENST00000238379 MROH2AA6NES4 1674 aa21.39■■□□□ 1.01
HDHD3-201ENST00000238379 NBPF1Q3BBV0 1214 aa21.39■■□□□ 1.01
HDHD3-201ENST00000238379 MADDQ8WXG6 1647 aa21.38■■□□□ 1.01
HDHD3-201ENST00000238379 WASHC2AQ641Q2 1341 aa21.38■■□□□ 1.01
HDHD3-201ENST00000238379 PREX1Q8TCU6 1659 aa21.37■■□□□ 1.01
HDHD3-201ENST00000238379 CLTCQ00610 1675 aaKnown RBP21.37■■□□□ 1.01
HDHD3-201ENST00000238379 C11orf95C9JLR9 678 aaPredicted RBP21.36■■□□□ 1.01
HDHD3-201ENST00000238379 MYOM2P54296 1465 aa21.35■■□□□ 1.01
HDHD3-201ENST00000238379 FBXO31Q5XUX0 539 aaPredicted RBP21.35■■□□□ 1.01
HDHD3-201ENST00000238379 SLC52A1Q9NWF4 448 aa21.35■■□□□ 1.01
HDHD3-201ENST00000238379 LAMC1P11047 1609 aa21.35■■□□□ 1.01
HDHD3-201ENST00000238379 CHGAP10645 457 aaKnown RBP21.34■■□□□ 1.01
HDHD3-201ENST00000238379 IFT172Q9UG01 1749 aa21.34■■□□□ 1.01
HDHD3-201ENST00000238379 ERVK-7P63135 1459 aa21.34■■□□□ 1.01
HDHD3-201ENST00000238379 IDI1Q13907 227 aa21.34■■□□□ 1.01
HDHD3-201ENST00000238379 ARID4BQ4LE39 1312 aaPredicted RBP21.33■■□□□ 1.01
HDHD3-201ENST00000238379 CCDC7Q96M83 1385 aa21.32■■□□□ 1
HDHD3-201ENST00000238379 RPGRIP1LQ68CZ1 1315 aa21.3■■□□□ 1
HDHD3-201ENST00000238379 ADGRF5Q8IZF2 1346 aa21.3■■□□□ 1
HDHD3-201ENST00000238379 NRXN1Q9ULB1 1477 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms