RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 PDE3BQ13370 1112 aa20.65■□□□□ 0.9
DDX55-201ENST00000238146 GRIN2AQ12879 1464 aa20.65■□□□□ 0.9
DDX55-201ENST00000238146 BACH2Q9BYV9 841 aa20.64■□□□□ 0.9
DDX55-201ENST00000238146 PARD3Q8TEW0 1356 aa20.64■□□□□ 0.89
DDX55-201ENST00000238146 IFT140Q96RY7 1462 aa20.63■□□□□ 0.89
DDX55-201ENST00000238146 MS4A1P11836 297 aa20.62■□□□□ 0.89
DDX55-201ENST00000238146 C9orf84Q5VXU9 1444 aa20.62■□□□□ 0.89
DDX55-201ENST00000238146 KDM5DQ9BY66 1539 aa20.62■□□□□ 0.89
DDX55-201ENST00000238146 CEP170Q5SW79 1584 aa20.62■□□□□ 0.89
DDX55-201ENST00000238146 CDCA7LQ96GN5 454 aa20.61■□□□□ 0.89
DDX55-201ENST00000238146 SHANK2Q9UPX8 1470 aa20.6■□□□□ 0.89
DDX55-201ENST00000238146 PER1O15534 1290 aaPredicted RBP20.59■□□□□ 0.89
DDX55-201ENST00000238146 PTPRGP23470 1445 aa20.59■□□□□ 0.89
DDX55-201ENST00000238146 CDC42BPAQ5VT25 1732 aa20.58■□□□□ 0.89
DDX55-201ENST00000238146 LAS1LQ9Y4W2 734 aaKnown RBP20.57■□□□□ 0.88
DDX55-201ENST00000238146 TSPY4P0CV99 314 aa20.56■□□□□ 0.88
DDX55-201ENST00000238146 TSPY10P0CW01 314 aa20.56■□□□□ 0.88
DDX55-201ENST00000238146 PLIN1O60240 522 aa20.54■□□□□ 0.88
DDX55-201ENST00000238146 NEFMP07197 916 aa20.54■□□□□ 0.88
DDX55-201ENST00000238146 USP35Q9P2H5 1018 aa20.54■□□□□ 0.88
DDX55-201ENST00000238146 ABCC10Q5T3U5 1492 aa20.54■□□□□ 0.88
DDX55-201ENST00000238146 PLEKHD1A6NEE1 506 aa20.54■□□□□ 0.88
DDX55-201ENST00000238146 PRAG1Q86YV5 1406 aa20.53■□□□□ 0.88
DDX55-201ENST00000238146 NBPF1Q3BBV0 1214 aa20.51■□□□□ 0.87
DDX55-201ENST00000238146 TRPM1Q7Z4N2 1603 aa20.51■□□□□ 0.87
DDX55-201ENST00000238146 HNRNPMP52272 730 aaKnown RBP eCLIP20.5■□□□□ 0.87
DDX55-201ENST00000238146 CRBNQ96SW2 442 aa20.5■□□□□ 0.87
DDX55-201ENST00000238146 INSRP06213 1382 aa20.5■□□□□ 0.87
DDX55-201ENST00000238146 WASHC2CQ9Y4E1 1318 aa20.5■□□□□ 0.87
DDX55-201ENST00000238146 BLMP54132 1417 aaPredicted RBP20.5■□□□□ 0.87
DDX55-201ENST00000238146 MAGI1Q96QZ7 1491 aaPredicted RBP20.49■□□□□ 0.87
DDX55-201ENST00000238146 CC2D1BQ5T0F9 858 aaKnown RBP20.49■□□□□ 0.87
DDX55-201ENST00000238146 SKAP1Q86WV1 359 aa20.49■□□□□ 0.87
DDX55-201ENST00000238146 EIF4G3O43432 1585 aaKnown RBP20.49■□□□□ 0.87
DDX55-201ENST00000238146 CARMIL2Q6F5E8 1435 aa20.48■□□□□ 0.87
DDX55-201ENST00000238146 PPM1GO15355 546 aaPredicted RBP20.48■□□□□ 0.87
DDX55-201ENST00000238146 CHMP7Q8WUX9 453 aaPredicted RBP20.48■□□□□ 0.87
DDX55-201ENST00000238146 GPRASP1Q5JY77 1395 aa20.47■□□□□ 0.87
DDX55-201ENST00000238146 IL27Q8NEV9 243 aa20.47■□□□□ 0.87
DDX55-201ENST00000238146 FAM135AQ9P2D6 1515 aa20.47■□□□□ 0.87
DDX55-201ENST00000238146 ZMYM4Q5VZL5 1548 aa20.47■□□□□ 0.87
DDX55-201ENST00000238146 JPH4Q96JJ6 628 aa20.47■□□□□ 0.87
DDX55-201ENST00000238146 COL17A1Q9UMD9 1497 aaPredicted RBP20.46■□□□□ 0.87
DDX55-201ENST00000238146 RGL3Q3MIN7 710 aa20.46■□□□□ 0.87
DDX55-201ENST00000238146 TESK2Q96S53 571 aa20.46■□□□□ 0.87
DDX55-201ENST00000238146 DISP3Q9P2K9 1392 aa20.46■□□□□ 0.87
DDX55-201ENST00000238146 CCDC144AA2RUR9 1427 aa20.46■□□□□ 0.87
DDX55-201ENST00000238146 ATP10BO94823 1461 aa20.46■□□□□ 0.87
DDX55-201ENST00000238146 PANK3Q9H999 370 aa20.44■□□□□ 0.86
DDX55-201ENST00000238146 ABCA8O94911 1581 aa20.44■□□□□ 0.86
DDX55-201ENST00000238146 ARHGEF5Q12774 1597 aa20.44■□□□□ 0.86
DDX55-201ENST00000238146 DDRGK1Q96HY6 314 aa20.42■□□□□ 0.86
DDX55-201ENST00000238146 C20orf194Q5TEA3 1177 aa20.42■□□□□ 0.86
DDX55-201ENST00000238146 SYNJ2O15056 1496 aa20.41■□□□□ 0.86
DDX55-201ENST00000238146 A2MP01023 1474 aa20.41■□□□□ 0.86
DDX55-201ENST00000238146 PLEKHH2Q8IVE3 1493 aa20.41■□□□□ 0.86
DDX55-201ENST00000238146 PLA2R1Q13018 1463 aa20.41■□□□□ 0.86
DDX55-201ENST00000238146 FBLN2P98095 1184 aa20.4■□□□□ 0.86
DDX55-201ENST00000238146 PRDM15P57071 1507 aaPredicted RBP20.4■□□□□ 0.86
DDX55-201ENST00000238146 KDM2BQ8NHM5 1336 aa20.39■□□□□ 0.85
DDX55-201ENST00000238146 ERBINQ96RT1 1412 aa20.39■□□□□ 0.85
DDX55-201ENST00000238146 CCDC141Q6ZP82 1450 aa20.38■□□□□ 0.85
DDX55-201ENST00000238146 LAMC1P11047 1609 aa20.38■□□□□ 0.85
DDX55-201ENST00000238146 ADAMTS8Q9UP79 889 aa20.38■□□□□ 0.85
DDX55-201ENST00000238146 NUP160Q12769 1436 aa20.37■□□□□ 0.85
DDX55-201ENST00000238146 TMF1P82094 1093 aa20.36■□□□□ 0.85
DDX55-201ENST00000238146 ANO8Q9HCE9 1232 aaPredicted RBP20.36■□□□□ 0.85
DDX55-201ENST00000238146 RTN4Q9NQC3 1192 aaKnown RBP20.34■□□□□ 0.85
DDX55-201ENST00000238146 SAMD9LQ8IVG5 1584 aa20.34■□□□□ 0.85
DDX55-201ENST00000238146 RSPH4AQ5TD94 716 aa20.33■□□□□ 0.85
DDX55-201ENST00000238146 CENPQQ7L2Z9 268 aaPredicted RBP20.33■□□□□ 0.85
DDX55-201ENST00000238146 DUSP27Q5VZP5 1158 aa20.33■□□□□ 0.84
DDX55-201ENST00000238146 PLEKHH1Q9ULM0 1364 aa20.32■□□□□ 0.84
DDX55-201ENST00000238146 SLC4A3P48751 1232 aa20.32■□□□□ 0.84
DDX55-201ENST00000238146 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.32■□□□□ 0.846e-7■■■□□ 19.2
DDX55-201ENST00000238146 NFKBIBQ15653 356 aa20.31■□□□□ 0.84
DDX55-201ENST00000238146 UNC13BO14795 1591 aa20.3■□□□□ 0.84
DDX55-201ENST00000238146 GSE1Q14687 1217 aa20.29■□□□□ 0.84
DDX55-201ENST00000238146 EIF2AK4Q9P2K8 1649 aaKnown RBP20.29■□□□□ 0.84
DDX55-201ENST00000238146 ZNF521Q96K83 1311 aa20.29■□□□□ 0.84
DDX55-201ENST00000238146 FAM161AQ3B820 660 aa20.29■□□□□ 0.84
DDX55-201ENST00000238146 C8orf34Q49A92 452 aa20.29■□□□□ 0.84
DDX55-201ENST00000238146 CDC42BPBQ9Y5S2 1711 aa20.29■□□□□ 0.84
DDX55-201ENST00000238146 PPP2R1AP30153 589 aa20.28■□□□□ 0.84
DDX55-201ENST00000238146 MAGI2Q86UL8 1455 aa20.27■□□□□ 0.84
DDX55-201ENST00000238146 MYO5CQ9NQX4 1742 aa20.27■□□□□ 0.84
DDX55-201ENST00000238146 WDR43Q15061 677 aaKnown RBP eCLIP20.27■□□□□ 0.83
DDX55-201ENST00000238146 WDR7Q9Y4E6 1490 aa20.26■□□□□ 0.83
DDX55-201ENST00000238146 PREX2Q70Z35 1606 aa20.26■□□□□ 0.83
DDX55-201ENST00000238146 GOLGA2Q08379 1002 aa20.26■□□□□ 0.83
DDX55-201ENST00000238146 DAXXQ9UER7 740 aaPredicted RBP20.25■□□□□ 0.83
DDX55-201ENST00000238146 KNSTRNQ9Y448 316 aa20.25■□□□□ 0.83
DDX55-201ENST00000238146 SYCP2Q9BX26 1530 aa20.24■□□□□ 0.83
DDX55-201ENST00000238146 AMER1Q5JTC6 1135 aaPredicted RBP20.23■□□□□ 0.83
DDX55-201ENST00000238146 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.23■□□□□ 0.83
DDX55-201ENST00000238146 ATP10AO60312 1499 aa20.23■□□□□ 0.83
DDX55-201ENST00000238146 IQGAP3Q86VI3 1631 aa20.23■□□□□ 0.83
DDX55-201ENST00000238146 MAST1Q9Y2H9 1570 aa20.23■□□□□ 0.83
DDX55-201ENST00000238146 BRPF3Q9ULD4 1205 aa20.22■□□□□ 0.83
DDX55-201ENST00000238146 SLFN5Q08AF3 891 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms