RNA–Protein interactions for RNA: ENST00000237596.6

PKD2-201, Transcript of polycystin 2, transient receptor potential cation channel, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKD2, Length 5,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2-201ENST00000237596 IGF1RP08069 1367 aa23.63■■□□□ 1.37
PKD2-201ENST00000237596 PMFBP1Q8TBY8 1022 aa23.62■■□□□ 1.37
PKD2-201ENST00000237596 CENPJQ9HC77 1338 aaPredicted RBP23.62■■□□□ 1.37
PKD2-201ENST00000237596 EVC2Q86UK5 1308 aa23.61■■□□□ 1.37
PKD2-201ENST00000237596 PHLDB1Q86UU1 1377 aa23.61■■□□□ 1.37
PKD2-201ENST00000237596 FGD5Q6ZNL6 1462 aa23.61■■□□□ 1.37
PKD2-201ENST00000237596 GNL2Q13823 731 aaKnown RBP23.6■■□□□ 1.37
PKD2-201ENST00000237596 KIF15Q9NS87 1388 aa23.6■■□□□ 1.37
PKD2-201ENST00000237596 COG3Q96JB2 828 aa23.6■■□□□ 1.37
PKD2-201ENST00000237596 MINK1Q8N4C8 1332 aaPredicted RBP23.59■■□□□ 1.37
PKD2-201ENST00000237596 CGNL1Q0VF96 1302 aa23.57■■□□□ 1.36
PKD2-201ENST00000237596 FAM69CQ0P6D2 419 aa23.57■■□□□ 1.36
PKD2-201ENST00000237596 DHX57Q6P158 1386 aaKnown RBP23.57■■□□□ 1.36
PKD2-201ENST00000237596 RRP7AQ9Y3A4 280 aaKnown RBP23.57■■□□□ 1.36
PKD2-201ENST00000237596 MYBBP1AQ9BQG0 1328 aaKnown RBP23.57■■□□□ 1.36
PKD2-201ENST00000237596 GPATCH3Q96I76 525 aa23.56■■□□□ 1.36
PKD2-201ENST00000237596 RAD54L2Q9Y4B4 1467 aa23.56■■□□□ 1.36
PKD2-201ENST00000237596 TCERG1O14776 1098 aaKnown RBP23.56■■□□□ 1.36
PKD2-201ENST00000237596 GTF2E1P29083 439 aaPredicted RBP23.54■■□□□ 1.36
PKD2-201ENST00000237596 TRIM6-TRIM34B2RNG4 842 aa23.53■■□□□ 1.36
PKD2-201ENST00000237596 MYOM3Q5VTT5 1437 aa23.52■■□□□ 1.36
PKD2-201ENST00000237596 ELL2O00472 640 aaPredicted RBP23.51■■□□□ 1.35
PKD2-201ENST00000237596 USP47Q96K76 1375 aa23.5■■□□□ 1.35
PKD2-201ENST00000237596 C1orf141Q5JVX7 400 aa23.48■■□□□ 1.35
PKD2-201ENST00000237596 ZNF644Q9H582 1327 aaPredicted RBP23.47■■□□□ 1.35
PKD2-201ENST00000237596 MFAP1P55081 439 aaKnown RBP23.47■■□□□ 1.35
PKD2-201ENST00000237596 TEFQ10587 303 aa23.47■■□□□ 1.35
PKD2-201ENST00000237596 EVA1CP58658 441 aa23.47■■□□□ 1.35
PKD2-201ENST00000237596 AQRO60306 1485 aaKnown RBP eCLIP23.46■■□□□ 1.35
PKD2-201ENST00000237596 PRKRIP1Q9H875 184 aaPredicted RBP23.46■■□□□ 1.35
PKD2-201ENST00000237596 CLSTN1O94985 981 aa23.46■■□□□ 1.35
PKD2-201ENST00000237596 GBP4Q96PP9 640 aa23.45■■□□□ 1.34
PKD2-201ENST00000237596 SLKQ9H2G2 1235 aaPredicted RBP23.45■■□□□ 1.34
PKD2-201ENST00000237596 G3V3G9 751 aa23.44■■□□□ 1.34
PKD2-201ENST00000237596 DCAF8Q5TAQ9 597 aa23.44■■□□□ 1.34
PKD2-201ENST00000237596 NCAPD3P42695 1498 aa23.43■■□□□ 1.34
PKD2-201ENST00000237596 FRAT2O75474 233 aaPredicted RBP23.43■■□□□ 1.34
PKD2-201ENST00000237596 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.43■■□□□ 1.34
PKD2-201ENST00000237596 BCL2L13Q9BXK5 485 aa23.42■■□□□ 1.34
PKD2-201ENST00000237596 HTATSF1O43719 755 aaKnown RBP23.41■■□□□ 1.34
PKD2-201ENST00000237596 DRC7Q8IY82 874 aa23.41■■□□□ 1.34
PKD2-201ENST00000237596 NAP1L5Q96NT1 182 aaPredicted RBP23.41■■□□□ 1.34
PKD2-201ENST00000237596 PSME1Q06323 249 aa23.4■■□□□ 1.34
PKD2-201ENST00000237596 E9PSI1 815 aa23.39■■□□□ 1.33
PKD2-201ENST00000237596 L1TD1Q5T7N2 865 aaKnown RBP23.39■■□□□ 1.33
PKD2-201ENST00000237596 STAC3Q96MF2 364 aa23.38■■□□□ 1.33
PKD2-201ENST00000237596 DIAPH1O60610 1272 aaKnown RBP23.38■■□□□ 1.33
PKD2-201ENST00000237596 FGD6Q6ZV73 1430 aa23.38■■□□□ 1.33
PKD2-201ENST00000237596 APAF1O14727 1248 aa23.37■■□□□ 1.33
PKD2-201ENST00000237596 HSP90B1P14625 803 aaKnown RBP23.36■■□□□ 1.33
PKD2-201ENST00000237596 TTC5Q8N0Z6 440 aa23.36■■□□□ 1.33
PKD2-201ENST00000237596 ZKSCAN2Q63HK3 967 aa23.36■■□□□ 1.33
PKD2-201ENST00000237596 TOMM22Q9NS69 142 aa23.35■■□□□ 1.33
PKD2-201ENST00000237596 CHAF1AQ13111 956 aaPredicted RBP23.34■■□□□ 1.33
PKD2-201ENST00000237596 PTMSP20962 102 aa23.33■■□□□ 1.33
PKD2-201ENST00000237596 AFAP1Q8N556 730 aa23.33■■□□□ 1.32
PKD2-201ENST00000237596 MSNP26038 577 aaKnown RBP23.32■■□□□ 1.32
PKD2-201ENST00000237596 NEXNQ0ZGT2 675 aa23.32■■□□□ 1.32
PKD2-201ENST00000237596 ANKRD50Q9ULJ7 1429 aa23.32■■□□□ 1.32
PKD2-201ENST00000237596 EIF2S2P20042 333 aaKnown RBP23.31■■□□□ 1.32
PKD2-201ENST00000237596 NOL8Q76FK4 1167 aaKnown RBP23.31■■□□□ 1.32
PKD2-201ENST00000237596 NGEFQ8N5V2 710 aa23.3■■□□□ 1.32
PKD2-201ENST00000237596 CCDC34Q96HJ3 373 aa23.3■■□□□ 1.32
PKD2-201ENST00000237596 GZF1Q9H116 711 aaPredicted RBP23.29■■□□□ 1.32
PKD2-201ENST00000237596 GRIN2BQ13224 1484 aa23.29■■□□□ 1.32
PKD2-201ENST00000237596 SYAP1Q96A49 352 aaPredicted RBP23.29■■□□□ 1.32
PKD2-201ENST00000237596 PLIN1O60240 522 aa23.28■■□□□ 1.32
PKD2-201ENST00000237596 ANKRD45Q5TZF3 282 aa23.28■■□□□ 1.32
PKD2-201ENST00000237596 RIPK4P57078 832 aa23.28■■□□□ 1.32
PKD2-201ENST00000237596 ATF3P18847 181 aa23.26■■□□□ 1.31
PKD2-201ENST00000237596 C9orf78Q9NZ63 289 aaPredicted RBP23.26■■□□□ 1.31
PKD2-201ENST00000237596 ST18O60284 1047 aa23.26■■□□□ 1.31
PKD2-201ENST00000237596 COG6Q9Y2V7 657 aa23.26■■□□□ 1.31
PKD2-201ENST00000237596 CUX1P39880 1505 aa23.26■■□□□ 1.31
PKD2-201ENST00000237596 RILPL2Q969X0 211 aa23.25■■□□□ 1.31
PKD2-201ENST00000237596 SYTL4Q96C24 671 aaPredicted RBP23.25■■□□□ 1.31
PKD2-201ENST00000237596 ZBED9Q6R2W3 1325 aa23.24■■□□□ 1.31
PKD2-201ENST00000237596 MSH5O43196 834 aa23.24■■□□□ 1.31
PKD2-201ENST00000237596 TMEM132EQ6IEE7 984 aa23.24■■□□□ 1.31
PKD2-201ENST00000237596 CENPQQ7L2Z9 268 aaPredicted RBP23.24■■□□□ 1.31
PKD2-201ENST00000237596 KIF3AQ9Y496 699 aa23.24■■□□□ 1.31
PKD2-201ENST00000237596 KIF16BQ96L93 1317 aa23.23■■□□□ 1.31
PKD2-201ENST00000237596 RASSF8Q8NHQ8 419 aa23.23■■□□□ 1.31
PKD2-201ENST00000237596 RAPGEF4Q8WZA2 1011 aa23.22■■□□□ 1.31
PKD2-201ENST00000237596 NECTIN2Q92692 538 aa23.22■■□□□ 1.31
PKD2-201ENST00000237596 FOXD4L1Q9NU39 408 aa23.22■■□□□ 1.31
PKD2-201ENST00000237596 GGNBP2Q9H3C7 697 aa23.21■■□□□ 1.31
PKD2-201ENST00000237596 LRRC9Q6ZRR7 1453 aa23.21■■□□□ 1.31
PKD2-201ENST00000237596 CASKIN1Q8WXD9 1431 aa23.21■■□□□ 1.31
PKD2-201ENST00000237596 RRP1P56182 461 aaKnown RBP23.21■■□□□ 1.31
PKD2-201ENST00000237596 API5Q9BZZ5 524 aaKnown RBP23.21■■□□□ 1.31
PKD2-201ENST00000237596 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.2■■□□□ 1.3
PKD2-201ENST00000237596 PRDM2Q13029 1718 aa23.2■■□□□ 1.3
PKD2-201ENST00000237596 DDX58O95786 925 aaKnown RBP23.2■■□□□ 1.3
PKD2-201ENST00000237596 IPO9Q96P70 1041 aaKnown RBP23.2■■□□□ 1.3
PKD2-201ENST00000237596 PRG4Q92954 1404 aaPredicted RBP23.2■■□□□ 1.3
PKD2-201ENST00000237596 NCOA2Q15596 1464 aa23.2■■□□□ 1.3
PKD2-201ENST00000237596 EXOC6Q8TAG9 804 aa23.19■■□□□ 1.3
PKD2-201ENST00000237596 RUNDC1Q96C34 613 aa23.19■■□□□ 1.3
PKD2-201ENST00000237596 CSPP1Q1MSJ5 1256 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms