RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 TSPOAP1O95153 1857 aa22.65■■□□□ 1.22
ITGA4-201ENST00000233573 NBPF8Q3BBV2 869 aa22.64■■□□□ 1.22
ITGA4-201ENST00000233573 KDM5CP41229 1560 aa22.64■■□□□ 1.22
ITGA4-201ENST00000233573 DDX10Q13206 875 aaKnown RBP22.64■■□□□ 1.21
ITGA4-201ENST00000233573 MAGI2Q86UL8 1455 aa22.63■■□□□ 1.21
ITGA4-201ENST00000233573 IQGAP3Q86VI3 1631 aa22.63■■□□□ 1.21
ITGA4-201ENST00000233573 RAPGEF3O95398 923 aa22.62■■□□□ 1.21
ITGA4-201ENST00000233573 PPRC1Q5VV67 1664 aaKnown RBP22.61■■□□□ 1.21
ITGA4-201ENST00000233573 HECW2Q9P2P5 1572 aa22.59■■□□□ 1.21
ITGA4-201ENST00000233573 HSPA5P11021 654 aaKnown RBP22.59■■□□□ 1.21
ITGA4-201ENST00000233573 KIF13AQ9H1H9 1805 aa22.58■■□□□ 1.21
ITGA4-201ENST00000233573 YTHDC1Q96MU7 727 aaKnown RBP22.58■■□□□ 1.2
ITGA4-201ENST00000233573 RICTORQ6R327 1708 aa22.57■■□□□ 1.2
ITGA4-201ENST00000233573 MLH3Q9UHC1 1453 aa22.56■■□□□ 1.2
ITGA4-201ENST00000233573 EIF4G2P78344 907 aaKnown RBP eCLIP22.56■■□□□ 1.2
ITGA4-201ENST00000233573 DHX29Q7Z478 1369 aaKnown RBP22.55■■□□□ 1.2
ITGA4-201ENST00000233573 ABCA6Q8N139 1617 aa22.55■■□□□ 1.2
ITGA4-201ENST00000233573 SCAF1Q9H7N4 1312 aaKnown RBP22.55■■□□□ 1.2
ITGA4-201ENST00000233573 DEPDC5O75140 1603 aa22.54■■□□□ 1.2
ITGA4-201ENST00000233573 SPATA31E1Q6ZUB1 1445 aa22.54■■□□□ 1.2
ITGA4-201ENST00000233573 UHRF1BP1Q6BDS2 1440 aa22.53■■□□□ 1.2
ITGA4-201ENST00000233573 FRMPD1Q5SYB0 1578 aa22.53■■□□□ 1.2
ITGA4-201ENST00000233573 KIF3BO15066 747 aa22.53■■□□□ 1.2
ITGA4-201ENST00000233573 PLA2R1Q13018 1463 aa22.52■■□□□ 1.2
ITGA4-201ENST00000233573 EIF2AK4Q9P2K8 1649 aaKnown RBP22.52■■□□□ 1.2
ITGA4-201ENST00000233573 A2MP01023 1474 aa22.52■■□□□ 1.19
ITGA4-201ENST00000233573 MROH1Q8NDA8 1641 aa22.5■■□□□ 1.19
ITGA4-201ENST00000233573 WASHC2AQ641Q2 1341 aa22.49■■□□□ 1.19
ITGA4-201ENST00000233573 ATP10AO60312 1499 aa22.48■■□□□ 1.19
ITGA4-201ENST00000233573 DIP2CQ9Y2E4 1556 aa22.47■■□□□ 1.19
ITGA4-201ENST00000233573 PRDM15P57071 1507 aaPredicted RBP22.46■■□□□ 1.19
ITGA4-201ENST00000233573 YEATS2Q9ULM3 1422 aa22.46■■□□□ 1.19
ITGA4-201ENST00000233573 POLR1AO95602 1720 aaPredicted RBP22.45■■□□□ 1.19
ITGA4-201ENST00000233573 E9PCH4 1651 aa22.45■■□□□ 1.18
ITGA4-201ENST00000233573 VWDEQ8N2E2 1590 aa22.45■■□□□ 1.18
ITGA4-201ENST00000233573 RALGAPBQ86X10 1494 aa22.44■■□□□ 1.18
ITGA4-201ENST00000233573 CCDC144AA2RUR9 1427 aa22.44■■□□□ 1.18
ITGA4-201ENST00000233573 RNF17Q9BXT8 1623 aaKnown RBP22.42■■□□□ 1.18
ITGA4-201ENST00000233573 TET3O43151 1660 aa22.41■■□□□ 1.18
ITGA4-201ENST00000233573 C11orf95C9JLR9 678 aaPredicted RBP22.41■■□□□ 1.18
ITGA4-201ENST00000233573 KANK1Q14678 1352 aa22.41■■□□□ 1.18
ITGA4-201ENST00000233573 ZMYM4Q5VZL5 1548 aa22.4■■□□□ 1.18
ITGA4-201ENST00000233573 CCDC7Q96M83 1385 aa22.4■■□□□ 1.18
ITGA4-201ENST00000233573 CEP152O94986 1710 aa22.39■■□□□ 1.17
ITGA4-201ENST00000233573 COL17A1Q9UMD9 1497 aaPredicted RBP22.38■■□□□ 1.17
ITGA4-201ENST00000233573 CCER2I3L3R5 266 aa22.37■■□□□ 1.17
ITGA4-201ENST00000233573 ANP32CO43423 234 aa22.37■■□□□ 1.17
ITGA4-201ENST00000233573 GGT6Q6P531 493 aa22.37■■□□□ 1.17
ITGA4-201ENST00000233573 BCORL1Q5H9F3 1711 aa22.36■■□□□ 1.17
ITGA4-201ENST00000233573 USP47Q96K76 1375 aa22.36■■□□□ 1.17
ITGA4-201ENST00000233573 ZNF326Q5BKZ1 582 aaKnown RBP22.35■■□□□ 1.17
ITGA4-201ENST00000233573 DCAF11Q8TEB1 546 aa22.35■■□□□ 1.17
ITGA4-201ENST00000233573 CNTLNQ9NXG0 1405 aa22.34■■□□□ 1.17
ITGA4-201ENST00000233573 SPHKAPQ2M3C7 1700 aa22.34■■□□□ 1.17
ITGA4-201ENST00000233573 TRPM1Q7Z4N2 1603 aa22.33■■□□□ 1.16
ITGA4-201ENST00000233573 EFCAB6Q5THR3 1501 aa22.33■■□□□ 1.16
ITGA4-201ENST00000233573 PRAG1Q86YV5 1406 aa22.33■■□□□ 1.16
ITGA4-201ENST00000233573 TRPM2O94759 1503 aa22.32■■□□□ 1.16
ITGA4-201ENST00000233573 PTPRTO14522 1441 aa22.32■■□□□ 1.16
ITGA4-201ENST00000233573 KIF7Q2M1P5 1343 aa22.31■■□□□ 1.16
ITGA4-201ENST00000233573 KDM2AQ9Y2K7 1162 aa22.31■■□□□ 1.16
ITGA4-201ENST00000233573 LMTK2Q8IWU2 1503 aa22.3■■□□□ 1.16
ITGA4-201ENST00000233573 RGL3Q3MIN7 710 aa22.3■■□□□ 1.16
ITGA4-201ENST00000233573 GTF3C3Q9Y5Q9 886 aa22.3■■□□□ 1.16
ITGA4-201ENST00000233573 CLTCL1P53675 1640 aa22.28■■□□□ 1.16
ITGA4-201ENST00000233573 ABCC3O15438 1527 aa22.28■■□□□ 1.16
ITGA4-201ENST00000233573 CARD11Q9BXL7 1154 aa22.26■■□□□ 1.15
ITGA4-201ENST00000233573 UGGT1Q9NYU2 1555 aa22.25■■□□□ 1.15
ITGA4-201ENST00000233573 SIGLEC1Q9BZZ2 1709 aa22.25■■□□□ 1.15
ITGA4-201ENST00000233573 WASHC2CQ9Y4E1 1318 aa22.25■■□□□ 1.15
ITGA4-201ENST00000233573 CFAP65Q6ZU64 1925 aaKnown RBP22.24■■□□□ 1.15
ITGA4-201ENST00000233573 LAMC1P11047 1609 aa22.24■■□□□ 1.15
ITGA4-201ENST00000233573 GPRASP1Q5JY77 1395 aa22.24■■□□□ 1.15
ITGA4-201ENST00000233573 CAMSAP1Q5T5Y3 1602 aa22.23■■□□□ 1.15
ITGA4-201ENST00000233573 NPATQ14207 1427 aa22.23■■□□□ 1.15
ITGA4-201ENST00000233573 ARID4BQ4LE39 1312 aaPredicted RBP22.23■■□□□ 1.15
ITGA4-201ENST00000233573 DNAJC5Q9H3Z4 198 aa22.22■■□□□ 1.15
ITGA4-201ENST00000233573 ROCK2O75116 1388 aaKnown RBP22.22■■□□□ 1.15
ITGA4-201ENST00000233573 ARHGEF40Q8TER5 1519 aa22.21■■□□□ 1.15
ITGA4-201ENST00000233573 TRHP20396 242 aaPredicted RBP22.21■■□□□ 1.15
ITGA4-201ENST00000233573 NEURL4Q96JN8 1562 aa22.19■■□□□ 1.14
ITGA4-201ENST00000233573 REREQ9P2R6 1566 aa22.19■■□□□ 1.14
ITGA4-201ENST00000233573 ZC3H13Q5T200 1668 aaKnown RBP22.17■■□□□ 1.14
ITGA4-201ENST00000233573 MADDQ8WXG6 1647 aa22.16■■□□□ 1.14
ITGA4-201ENST00000233573 ST20-MTHFSA0A0A6YYL1 179 aa22.16■■□□□ 1.14
ITGA4-201ENST00000233573 NBPF1Q3BBV0 1214 aa22.15■■□□□ 1.14
ITGA4-201ENST00000233573 AGLP35573 1532 aa22.14■■□□□ 1.14
ITGA4-201ENST00000233573 PRKRIP1Q9H875 184 aaPredicted RBP22.13■■□□□ 1.13
ITGA4-201ENST00000233573 MROH2AA6NES4 1674 aa22.12■■□□□ 1.13
ITGA4-201ENST00000233573 KIF1BO60333 1816 aa22.12■■□□□ 1.13
ITGA4-201ENST00000233573 MLECQ14165 292 aa22.11■■□□□ 1.13
ITGA4-201ENST00000233573 STAC3Q96MF2 364 aa22.1■■□□□ 1.13
ITGA4-201ENST00000233573 SYNMO15061 1565 aa22.09■■□□□ 1.13
ITGA4-201ENST00000233573 NOS1P29475 1434 aa22.08■■□□□ 1.13
ITGA4-201ENST00000233573 ARHGAP31Q2M1Z3 1444 aa22.08■■□□□ 1.13
ITGA4-201ENST00000233573 CLTCQ00610 1675 aaKnown RBP22.07■■□□□ 1.12
ITGA4-201ENST00000233573 ADGRB3O60242 1522 aa22.05■■□□□ 1.12
ITGA4-201ENST00000233573 IFT172Q9UG01 1749 aa22.05■■□□□ 1.12
ITGA4-201ENST00000233573 CHGAP10645 457 aaKnown RBP22.05■■□□□ 1.12
ITGA4-201ENST00000233573 IQGAP1P46940 1657 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms