RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 CD109Q6YHK3 1445 aa21.33■■□□□ 1.01
DDX1-201ENST00000233084 CCDC141Q6ZP82 1450 aa21.33■■□□□ 1
DDX1-201ENST00000233084 ROCK1Q13464 1354 aa21.32■■□□□ 1
DDX1-201ENST00000233084 ADGRL2O95490 1459 aa21.31■■□□□ 1
DDX1-201ENST00000233084 SENP3-EIF4A1A0A087X0R7 540 aa21.3■■□□□ 1
DDX1-201ENST00000233084 ZBED9Q6R2W3 1325 aa21.3■■□□□ 1
DDX1-201ENST00000233084 RRP7BPQ9NSQ0 103 aa21.29■■□□□ 1
DDX1-201ENST00000233084 C9orf84Q5VXU9 1444 aa21.29■■□□□ 1
DDX1-201ENST00000233084 KDM6BO15054 1643 aa21.29■■□□□ 1
DDX1-201ENST00000233084 KIF13AQ9H1H9 1805 aa21.28■■□□□ 1
DDX1-201ENST00000233084 HSPA5P11021 654 aaKnown RBP21.28■■□□□ 1
DDX1-201ENST00000233084 CFAP74Q9C0B2 1584 aa21.28■■□□□ 1
DDX1-201ENST00000233084 NCOA1Q15788 1441 aa21.27■■□□□ 1
DDX1-201ENST00000233084 CNGB1Q14028 1251 aaPredicted RBP21.27■■□□□ 1
DDX1-201ENST00000233084 BRPF3Q9ULD4 1205 aa21.27■■□□□ 1
DDX1-201ENST00000233084 MAST1Q9Y2H9 1570 aa21.27■■□□□ 1
DDX1-201ENST00000233084 DNAJC5Q9H3Z4 198 aa21.26■□□□□ 0.99
DDX1-201ENST00000233084 TRAPPC8Q9Y2L5 1435 aa21.25■□□□□ 0.99
DDX1-201ENST00000233084 ADGRL1O94910 1474 aa21.25■□□□□ 0.99
DDX1-201ENST00000233084 RSPH4AQ5TD94 716 aa21.25■□□□□ 0.99
DDX1-201ENST00000233084 PPRC1Q5VV67 1664 aaKnown RBP21.23■□□□□ 0.99
DDX1-201ENST00000233084 PRKRIP1Q9H875 184 aaPredicted RBP21.23■□□□□ 0.99
DDX1-201ENST00000233084 FAM69CQ0P6D2 419 aa21.22■□□□□ 0.99
DDX1-201ENST00000233084 TSPOAP1O95153 1857 aa21.22■□□□□ 0.99
DDX1-201ENST00000233084 TSPY4P0CV99 314 aa21.22■□□□□ 0.99
DDX1-201ENST00000233084 TSPY10P0CW01 314 aa21.22■□□□□ 0.99
DDX1-201ENST00000233084 ANKRD30AQ9BXX3 1397 aa21.22■□□□□ 0.99
DDX1-201ENST00000233084 SCAPERQ9BY12 1400 aa21.2■□□□□ 0.98
DDX1-201ENST00000233084 NEO1Q92859 1461 aa21.19■□□□□ 0.98
DDX1-201ENST00000233084 PLXNC1O60486 1568 aa21.19■□□□□ 0.98
DDX1-201ENST00000233084 ZFYVE16Q7Z3T8 1539 aa21.16■□□□□ 0.98
DDX1-201ENST00000233084 AFAP1Q8N556 730 aa21.16■□□□□ 0.98
DDX1-201ENST00000233084 CNTLNQ9NXG0 1405 aa21.16■□□□□ 0.98
DDX1-201ENST00000233084 INO80Q9ULG1 1556 aaPredicted RBP21.16■□□□□ 0.98
DDX1-201ENST00000233084 C11orf95C9JLR9 678 aaPredicted RBP21.15■□□□□ 0.98
DDX1-201ENST00000233084 WASHC2CQ9Y4E1 1318 aa21.15■□□□□ 0.98
DDX1-201ENST00000233084 KIF15Q9NS87 1388 aa21.15■□□□□ 0.98
DDX1-201ENST00000233084 USP35Q9P2H5 1018 aa21.14■□□□□ 0.98
DDX1-201ENST00000233084 EIF4G2P78344 907 aaKnown RBP eCLIP21.14■□□□□ 0.97
DDX1-201ENST00000233084 POGZQ7Z3K3 1410 aa21.12■□□□□ 0.97
DDX1-201ENST00000233084 ANKRD50Q9ULJ7 1429 aa21.12■□□□□ 0.97
DDX1-201ENST00000233084 ZNF518AQ6AHZ1 1483 aa21.12■□□□□ 0.97
DDX1-201ENST00000233084 KDM5CP41229 1560 aa21.12■□□□□ 0.97
DDX1-201ENST00000233084 ATP7AQ04656 1500 aa21.11■□□□□ 0.97
DDX1-201ENST00000233084 RTEL1-TNFRSF6BF6WH68 1400 aa21.11■□□□□ 0.97
DDX1-201ENST00000233084 RICTORQ6R327 1708 aa21.11■□□□□ 0.97
DDX1-201ENST00000233084 NUDCQ9Y266 331 aa21.1■□□□□ 0.97
DDX1-201ENST00000233084 KIDINS220Q9ULH0 1771 aa21.1■□□□□ 0.97
DDX1-201ENST00000233084 SPAG9O60271 1321 aaKnown RBP21.1■□□□□ 0.97
DDX1-201ENST00000233084 SMG6Q86US8 1419 aaKnown RBP21.08■□□□□ 0.96
DDX1-201ENST00000233084 TEX14Q8IWB6 1497 aa21.08■□□□□ 0.96
DDX1-201ENST00000233084 DUOX2Q9NRD8 1548 aa21.07■□□□□ 0.96
DDX1-201ENST00000233084 PPM1GO15355 546 aaPredicted RBP21.07■□□□□ 0.96
DDX1-201ENST00000233084 DENND4BO75064 1496 aaPredicted RBP21.06■□□□□ 0.96
DDX1-201ENST00000233084 PDE4AP27815 886 aa21.06■□□□□ 0.96
DDX1-201ENST00000233084 GSE1Q14687 1217 aa21.06■□□□□ 0.96
DDX1-201ENST00000233084 FRMPD1Q5SYB0 1578 aa21.06■□□□□ 0.96
DDX1-201ENST00000233084 HECW2Q9P2P5 1572 aa21.05■□□□□ 0.96
DDX1-201ENST00000233084 MLH3Q9UHC1 1453 aa21.02■□□□□ 0.96
DDX1-201ENST00000233084 CCDC7Q96M83 1385 aa21.02■□□□□ 0.96
DDX1-201ENST00000233084 RAPGEF3O95398 923 aa21.02■□□□□ 0.96
DDX1-201ENST00000233084 ERBINQ96RT1 1412 aa21.02■□□□□ 0.95
DDX1-201ENST00000233084 RNF123Q5XPI4 1314 aa21.01■□□□□ 0.95
DDX1-201ENST00000233084 UNC13BO14795 1591 aa21■□□□□ 0.95
DDX1-201ENST00000233084 ABCA6Q8N139 1617 aa21■□□□□ 0.95
DDX1-201ENST00000233084 PZPP20742 1482 aa20.99■□□□□ 0.95
DDX1-201ENST00000233084 FRAT1Q92837 279 aaPredicted RBP20.99■□□□□ 0.95
DDX1-201ENST00000233084 KDM5DQ9BY66 1539 aa20.99■□□□□ 0.95
DDX1-201ENST00000233084 TCERG1O14776 1098 aaKnown RBP20.98■□□□□ 0.95
DDX1-201ENST00000233084 SLC4A3P48751 1232 aa20.98■□□□□ 0.95
DDX1-201ENST00000233084 EXOC6Q8TAG9 804 aa20.98■□□□□ 0.95
DDX1-201ENST00000233084 POLR3GLQ9BT43 218 aa20.98■□□□□ 0.95
DDX1-201ENST00000233084 BACH2Q9BYV9 841 aa20.97■□□□□ 0.95
DDX1-201ENST00000233084 ZMYM4Q5VZL5 1548 aa20.96■□□□□ 0.95
DDX1-201ENST00000233084 NFKBIBQ15653 356 aa20.96■□□□□ 0.95
DDX1-201ENST00000233084 MPHOSPH9Q99550 1183 aa20.96■□□□□ 0.95
DDX1-201ENST00000233084 EIF2AK4Q9P2K8 1649 aaKnown RBP20.94■□□□□ 0.94
DDX1-201ENST00000233084 MAGI2Q86UL8 1455 aa20.94■□□□□ 0.94
DDX1-201ENST00000233084 DIP2CQ9Y2E4 1556 aa20.94■□□□□ 0.94
DDX1-201ENST00000233084 COL17A1Q9UMD9 1497 aaPredicted RBP20.94■□□□□ 0.94
DDX1-201ENST00000233084 SKAP1Q86WV1 359 aa20.94■□□□□ 0.94
DDX1-201ENST00000233084 DEPDC5O75140 1603 aa20.93■□□□□ 0.94
DDX1-201ENST00000233084 NUP155O75694 1391 aa20.93■□□□□ 0.94
DDX1-201ENST00000233084 DHX29Q7Z478 1369 aaKnown RBP20.93■□□□□ 0.94
DDX1-201ENST00000233084 L3MBTL2Q969R5 705 aa20.92■□□□□ 0.94
DDX1-201ENST00000233084 KIF7Q2M1P5 1343 aa20.92■□□□□ 0.94
DDX1-201ENST00000233084 IQGAP3Q86VI3 1631 aa20.91■□□□□ 0.94
DDX1-201ENST00000233084 A2MP01023 1474 aa20.91■□□□□ 0.94
DDX1-201ENST00000233084 FAM135AQ9P2D6 1515 aa20.9■□□□□ 0.94
DDX1-201ENST00000233084 PKNOX2Q96KN3 472 aa20.9■□□□□ 0.94
DDX1-201ENST00000233084 SLC4A1APQ9BWU0 796 aaKnown RBP20.9■□□□□ 0.94
DDX1-201ENST00000233084 YEATS2Q9ULM3 1422 aa20.9■□□□□ 0.94
DDX1-201ENST00000233084 FOXD1Q16676 465 aa20.89■□□□□ 0.93
DDX1-201ENST00000233084 TRHP20396 242 aaPredicted RBP20.88■□□□□ 0.93
DDX1-201ENST00000233084 BCORL1Q5H9F3 1711 aa20.88■□□□□ 0.93
DDX1-201ENST00000233084 MROH1Q8NDA8 1641 aa20.88■□□□□ 0.93
DDX1-201ENST00000233084 RSPH6AQ9H0K4 717 aa20.86■□□□□ 0.93
DDX1-201ENST00000233084 RRP1P56182 461 aaKnown RBP20.86■□□□□ 0.93
DDX1-201ENST00000233084 RNF17Q9BXT8 1623 aaKnown RBP20.85■□□□□ 0.93
DDX1-201ENST00000233084 DAXXQ9UER7 740 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms