RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 HECW2Q9P2P5 1572 aa34.18■■■■□ 3.06
RRP9-201ENST00000232888 DEPDC5O75140 1603 aa34.15■■■■□ 3.06
RRP9-201ENST00000232888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.13■■■■□ 3.05
RRP9-201ENST00000232888 A2MP01023 1474 aa34.11■■■■□ 3.05
RRP9-201ENST00000232888 RICTORQ6R327 1708 aa34.09■■■■□ 3.05
RRP9-201ENST00000232888 KANK1Q14678 1352 aa34.08■■■■□ 3.05
RRP9-201ENST00000232888 PPRC1Q5VV67 1664 aaKnown RBP34.07■■■■□ 3.04
RRP9-201ENST00000232888 RAPGEF3O95398 923 aa34.06■■■■□ 3.04
RRP9-201ENST00000232888 VWDEQ8N2E2 1590 aa34.04■■■■□ 3.04
RRP9-201ENST00000232888 KIF3BO15066 747 aa34.04■■■■□ 3.04
RRP9-201ENST00000232888 L3MBTL2Q969R5 705 aa34.04■■■■□ 3.04
RRP9-201ENST00000232888 PRDM15P57071 1507 aaPredicted RBP34.03■■■■□ 3.04
RRP9-201ENST00000232888 ATP10AO60312 1499 aa34.03■■■■□ 3.04
RRP9-201ENST00000232888 KIF13AQ9H1H9 1805 aa34.02■■■■□ 3.04
RRP9-201ENST00000232888 ZMYM4Q5VZL5 1548 aa34.01■■■■□ 3.03
RRP9-201ENST00000232888 BCORL1Q5H9F3 1711 aa34■■■■□ 3.03
RRP9-201ENST00000232888 ABCA6Q8N139 1617 aa33.99■■■■□ 3.03
RRP9-201ENST00000232888 RNF17Q9BXT8 1623 aaKnown RBP33.98■■■■□ 3.03
RRP9-201ENST00000232888 FRMPD1Q5SYB0 1578 aa33.97■■■■□ 3.03
RRP9-201ENST00000232888 TSPOAP1O95153 1857 aa33.96■■■■□ 3.03
RRP9-201ENST00000232888 DIP2CQ9Y2E4 1556 aa33.95■■■■□ 3.03
RRP9-201ENST00000232888 MROH1Q8NDA8 1641 aa33.95■■■■□ 3.03
RRP9-201ENST00000232888 TET3O43151 1660 aa33.95■■■■□ 3.02
RRP9-201ENST00000232888 CCDC144AA2RUR9 1427 aa33.93■■■■□ 3.02
RRP9-201ENST00000232888 DIEXFQ68CQ4 756 aaKnown RBP33.93■■■■□ 3.02
RRP9-201ENST00000232888 PLA2R1Q13018 1463 aa33.92■■■■□ 3.02
RRP9-201ENST00000232888 LMTK2Q8IWU2 1503 aa33.91■■■■□ 3.02
RRP9-201ENST00000232888 E9PCH4 1651 aa33.86■■■■□ 3.01
RRP9-201ENST00000232888 PTPRTO14522 1441 aa33.85■■■■□ 3.01
RRP9-201ENST00000232888 YEATS2Q9ULM3 1422 aa33.83■■■■□ 3.01
RRP9-201ENST00000232888 TRPM2O94759 1503 aa33.8■■■■□ 3
RRP9-201ENST00000232888 UHRF1BP1Q6BDS2 1440 aa33.79■■■■□ 3
RRP9-201ENST00000232888 REREQ9P2R6 1566 aa33.79■■■■□ 3
RRP9-201ENST00000232888 EFCAB6Q5THR3 1501 aa33.79■■■■□ 3
RRP9-201ENST00000232888 SPHKAPQ2M3C7 1700 aa33.75■■■□□ 2.99
RRP9-201ENST00000232888 NBPF8Q3BBV2 869 aa33.74■■■□□ 2.99
RRP9-201ENST00000232888 GGT6Q6P531 493 aa33.73■■■□□ 2.99
RRP9-201ENST00000232888 ABCC3O15438 1527 aa33.7■■■□□ 2.99
RRP9-201ENST00000232888 AGLP35573 1532 aa33.7■■■□□ 2.99
RRP9-201ENST00000232888 COL17A1Q9UMD9 1497 aaPredicted RBP33.69■■■□□ 2.98
RRP9-201ENST00000232888 DNAJC5Q9H3Z4 198 aa33.69■■■□□ 2.98
RRP9-201ENST00000232888 WASHC2CQ9Y4E1 1318 aa33.68■■■□□ 2.98
RRP9-201ENST00000232888 CEP152O94986 1710 aa33.67■■■□□ 2.98
RRP9-201ENST00000232888 NEURL4Q96JN8 1562 aa33.66■■■□□ 2.98
RRP9-201ENST00000232888 EIF4G2P78344 907 aaKnown RBP eCLIP33.66■■■□□ 2.98
RRP9-201ENST00000232888 ZC3H13Q5T200 1668 aaKnown RBP33.66■■■□□ 2.98
RRP9-201ENST00000232888 PPP6R1Q9UPN7 881 aa33.65■■■□□ 2.98
RRP9-201ENST00000232888 SPATA31E1Q6ZUB1 1445 aa33.64■■■□□ 2.98
RRP9-201ENST00000232888 DCAF11Q8TEB1 546 aa33.64■■■□□ 2.98
RRP9-201ENST00000232888 STAC3Q96MF2 364 aa33.64■■■□□ 2.98
RRP9-201ENST00000232888 ARHGEF40Q8TER5 1519 aa33.62■■■□□ 2.97
RRP9-201ENST00000232888 ARHGAP31Q2M1Z3 1444 aa33.62■■■□□ 2.97
RRP9-201ENST00000232888 RALGAPBQ86X10 1494 aa33.6■■■□□ 2.97
RRP9-201ENST00000232888 NPATQ14207 1427 aa33.6■■■□□ 2.97
RRP9-201ENST00000232888 CLTCL1P53675 1640 aa33.6■■■□□ 2.97
RRP9-201ENST00000232888 CNTLNQ9NXG0 1405 aa33.58■■■□□ 2.97
RRP9-201ENST00000232888 CAMSAP1Q5T5Y3 1602 aa33.57■■■□□ 2.97
RRP9-201ENST00000232888 HSPA5P11021 654 aaKnown RBP33.56■■■□□ 2.96
RRP9-201ENST00000232888 RGL3Q3MIN7 710 aa33.56■■■□□ 2.96
RRP9-201ENST00000232888 KDM2AQ9Y2K7 1162 aa33.55■■■□□ 2.96
RRP9-201ENST00000232888 PRAG1Q86YV5 1406 aa33.55■■■□□ 2.96
RRP9-201ENST00000232888 ZNF326Q5BKZ1 582 aaKnown RBP33.53■■■□□ 2.96
RRP9-201ENST00000232888 NOS1P29475 1434 aa33.5■■■□□ 2.95
RRP9-201ENST00000232888 HIRIP3Q9BW71 556 aaPredicted RBP33.47■■■□□ 2.95
RRP9-201ENST00000232888 TRHP20396 242 aaPredicted RBP33.47■■■□□ 2.95
RRP9-201ENST00000232888 KIF1BO60333 1816 aa33.44■■■□□ 2.94
RRP9-201ENST00000232888 TRPM1Q7Z4N2 1603 aa33.42■■■□□ 2.94
RRP9-201ENST00000232888 GPRASP1Q5JY77 1395 aa33.4■■■□□ 2.94
RRP9-201ENST00000232888 USP47Q96K76 1375 aa33.4■■■□□ 2.94
RRP9-201ENST00000232888 CARD11Q9BXL7 1154 aa33.4■■■□□ 2.94
RRP9-201ENST00000232888 UGGT1Q9NYU2 1555 aa33.4■■■□□ 2.94
RRP9-201ENST00000232888 ROCK2O75116 1388 aaKnown RBP33.39■■■□□ 2.94
RRP9-201ENST00000232888 ADGRB3O60242 1522 aa33.37■■■□□ 2.93
RRP9-201ENST00000232888 LAMC1P11047 1609 aa33.37■■■□□ 2.93
RRP9-201ENST00000232888 SLC52A1Q9NWF4 448 aa33.36■■■□□ 2.93
RRP9-201ENST00000232888 PIK3C2BO00750 1634 aa33.35■■■□□ 2.93
RRP9-201ENST00000232888 MYOM2P54296 1465 aa33.35■■■□□ 2.93
RRP9-201ENST00000232888 SIGLEC1Q9BZZ2 1709 aa33.35■■■□□ 2.93
RRP9-201ENST00000232888 DDX10Q13206 875 aaKnown RBP33.34■■■□□ 2.93
RRP9-201ENST00000232888 MIER1Q8N108 512 aa33.33■■■□□ 2.93
RRP9-201ENST00000232888 MADDQ8WXG6 1647 aa33.33■■■□□ 2.93
RRP9-201ENST00000232888 RPGRIP1LQ68CZ1 1315 aa33.32■■■□□ 2.93
RRP9-201ENST00000232888 SYNMO15061 1565 aa33.32■■■□□ 2.93
RRP9-201ENST00000232888 PREX1Q8TCU6 1659 aa33.29■■■□□ 2.92
RRP9-201ENST00000232888 ARID4BQ4LE39 1312 aaPredicted RBP33.28■■■□□ 2.92
RRP9-201ENST00000232888 WASHC2AQ641Q2 1341 aa33.28■■■□□ 2.92
RRP9-201ENST00000232888 CFAP65Q6ZU64 1925 aaKnown RBP33.27■■■□□ 2.92
RRP9-201ENST00000232888 MROH2AA6NES4 1674 aa33.26■■■□□ 2.91
RRP9-201ENST00000232888 IFT172Q9UG01 1749 aa33.26■■■□□ 2.91
RRP9-201ENST00000232888 CCDC7Q96M83 1385 aa33.25■■■□□ 2.91
RRP9-201ENST00000232888 ERVK-7P63135 1459 aa33.25■■■□□ 2.91
RRP9-201ENST00000232888 CLTCQ00610 1675 aaKnown RBP33.25■■■□□ 2.91
RRP9-201ENST00000232888 ESF1Q9H501 851 aaKnown RBP33.24■■■□□ 2.91
RRP9-201ENST00000232888 KIAA1210Q9ULL0 1709 aa33.24■■■□□ 2.91
RRP9-201ENST00000232888 NRXN1Q9ULB1 1477 aa33.23■■■□□ 2.91
RRP9-201ENST00000232888 NBPF1Q3BBV0 1214 aa33.23■■■□□ 2.91
RRP9-201ENST00000232888 POLR1AO95602 1720 aaPredicted RBP33.23■■■□□ 2.91
RRP9-201ENST00000232888 CHGAP10645 457 aaKnown RBP33.21■■■□□ 2.91
RRP9-201ENST00000232888 MLECQ14165 292 aa33.21■■■□□ 2.91
RRP9-201ENST00000232888 IDI1Q13907 227 aa33.2■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms