RNA–Protein interactions for RNA: ENST00000231021.8

CDH9-201, Transcript of cadherin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH9, Length 3,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-201ENST00000231021 AK7Q96M32 723 aa5.87□□□□□ -1.47
CDH9-201ENST00000231021 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.86□□□□□ -1.47
CDH9-201ENST00000231021 MLLT3P42568 568 aaPredicted RBP5.86□□□□□ -1.47
CDH9-201ENST00000231021 NEUROD1Q13562 356 aa5.86□□□□□ -1.47
CDH9-201ENST00000231021 A6NJR5 290 aa5.86□□□□□ -1.47
CDH9-201ENST00000231021 MAP4K4O95819 1239 aaPredicted RBP5.86□□□□□ -1.47
CDH9-201ENST00000231021 ZNF326Q5BKZ1 582 aaKnown RBP5.86□□□□□ -1.47
CDH9-201ENST00000231021 PLSCR2Q9NRY7 297 aa5.86□□□□□ -1.47
CDH9-201ENST00000231021 SUGT1Q9Y2Z0 365 aa5.86□□□□□ -1.47
CDH9-201ENST00000231021 RIOK3O14730 519 aaKnown RBP5.85□□□□□ -1.47
CDH9-201ENST00000231021 LAS1LQ9Y4W2 734 aaKnown RBP5.85□□□□□ -1.47
CDH9-201ENST00000231021 EXOC8Q8IYI6 725 aa5.85□□□□□ -1.47
CDH9-201ENST00000231021 SECISBP2LQ93073 1101 aaKnown RBP5.85□□□□□ -1.47
CDH9-201ENST00000231021 NOM1Q5C9Z4 860 aaKnown RBP5.84□□□□□ -1.47
CDH9-201ENST00000231021 APBB1IPQ7Z5R6 666 aaPredicted RBP5.84□□□□□ -1.47
CDH9-201ENST00000231021 MIER1Q8N108 512 aa5.84□□□□□ -1.47
CDH9-201ENST00000231021 TMTC2Q8N394 836 aa5.84□□□□□ -1.47
CDH9-201ENST00000231021 TAGLNQ01995 201 aaKnown RBP5.83□□□□□ -1.48
CDH9-201ENST00000231021 FLIIQ13045 1269 aa5.83□□□□□ -1.48
CDH9-201ENST00000231021 ANP32EQ9BTT0 268 aa5.83□□□□□ -1.48
CDH9-201ENST00000231021 ILDR1Q86SU0 546 aaPredicted RBP5.82□□□□□ -1.48
CDH9-201ENST00000231021 REM2Q8IYK8 340 aaPredicted RBP5.82□□□□□ -1.48
CDH9-201ENST00000231021 POM121CA8CG34 1229 aa5.81□□□□□ -1.48
CDH9-201ENST00000231021 PABPN1Q86U42 306 aaKnown RBP eCLIP5.81□□□□□ -1.48
CDH9-201ENST00000231021 HIRIP3Q9BW71 556 aaPredicted RBP5.81□□□□□ -1.48
CDH9-201ENST00000231021 TPD52L2O43399 206 aaKnown RBP5.81□□□□□ -1.48
CDH9-201ENST00000231021 TXNDC2Q86VQ3 553 aa5.81□□□□□ -1.48
CDH9-201ENST00000231021 GPATCH11Q8N954 259 aa5.81□□□□□ -1.48
CDH9-201ENST00000231021 SERPINA10Q9UK55 444 aa5.81□□□□□ -1.48
CDH9-201ENST00000231021 OSCARQ8IYS5 282 aa5.8□□□□□ -1.48
CDH9-201ENST00000231021 GABBR1Q9UBS5 961 aa5.8□□□□□ -1.48
CDH9-201ENST00000231021 PARP9Q8IXQ6 854 aa5.8□□□□□ -1.48
CDH9-201ENST00000231021 ANKRD13AQ8IZ07 590 aa5.8□□□□□ -1.48
CDH9-201ENST00000231021 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.8□□□□□ -1.48
CDH9-201ENST00000231021 ZCCHC6Q5VYS8 1495 aaKnown RBP5.8□□□□□ -1.48
CDH9-201ENST00000231021 DNAJC2Q99543 621 aaKnown RBP5.79□□□□□ -1.48
CDH9-201ENST00000231021 CDCA7Q9BWT1 371 aaPredicted RBP5.79□□□□□ -1.48
CDH9-201ENST00000231021 FOXD4Q12950 439 aaPredicted RBP5.79□□□□□ -1.48
CDH9-201ENST00000231021 FBXO31Q5XUX0 539 aaPredicted RBP5.79□□□□□ -1.48
CDH9-201ENST00000231021 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.78□□□□□ -1.48
CDH9-201ENST00000231021 CDCA8Q53HL2 280 aa5.78□□□□□ -1.48
CDH9-201ENST00000231021 SPDYE1Q8NFV5 336 aaPredicted RBP5.78□□□□□ -1.48
CDH9-201ENST00000231021 FXR2P51116 673 aaKnown RBP eCLIP5.78□□□□□ -1.48
CDH9-201ENST00000231021 C9orf131Q5VYM1 1079 aa5.78□□□□□ -1.48
CDH9-201ENST00000231021 DIEXFQ68CQ4 756 aaKnown RBP5.78□□□□□ -1.48
CDH9-201ENST00000231021 POTEHQ6S545 545 aa5.78□□□□□ -1.48
CDH9-201ENST00000231021 NAP1L2Q9ULW6 460 aaPredicted RBP5.78□□□□□ -1.48
CDH9-201ENST00000231021 CHRDL2Q6WN34 429 aa5.77□□□□□ -1.49
CDH9-201ENST00000231021 PLEKHD1A6NEE1 506 aa5.77□□□□□ -1.49
CDH9-201ENST00000231021 PARNO95453 639 aaKnown RBP5.77□□□□□ -1.49
CDH9-201ENST00000231021 SND1Q7KZF4 910 aaKnown RBP eCLIP5.77□□□□□ -1.49
CDH9-201ENST00000231021 GPIHBP1Q8IV16 184 aa5.77□□□□□ -1.49
CDH9-201ENST00000231021 AMOTL2Q9Y2J4 779 aa5.77□□□□□ -1.49
CDH9-201ENST00000231021 PAX3P23760 479 aa5.76□□□□□ -1.49
CDH9-201ENST00000231021 SCNN1AP37088 669 aa5.76□□□□□ -1.49
CDH9-201ENST00000231021 ZC3H4Q9UPT8 1303 aaKnown RBP5.76□□□□□ -1.49
CDH9-201ENST00000231021 SOCS7O14512 581 aa5.76□□□□□ -1.49
CDH9-201ENST00000231021 STAG3Q9UJ98 1225 aa5.76□□□□□ -1.49
CDH9-201ENST00000231021 COG6Q9Y2V7 657 aa5.76□□□□□ -1.49
CDH9-201ENST00000231021 DEKP35659 375 aaKnown RBP5.76□□□□□ -1.49
CDH9-201ENST00000231021 SPTY2D1Q68D10 685 aaPredicted RBP5.76□□□□□ -1.49
CDH9-201ENST00000231021 CHMP4BQ9H444 224 aaKnown RBP5.76□□□□□ -1.49
CDH9-201ENST00000231021 PNMA2Q9UL42 364 aa5.76□□□□□ -1.49
CDH9-201ENST00000231021 UNC13AQ9UPW8 1703 aa5.75□□□□□ -1.49
CDH9-201ENST00000231021 ARHGEF1Q92888 912 aaKnown RBP5.75□□□□□ -1.49
CDH9-201ENST00000231021 SNRKQ9NRH2 765 aa5.75□□□□□ -1.49
CDH9-201ENST00000231021 ZNF330Q9Y3S2 320 aaPredicted RBP5.75□□□□□ -1.49
CDH9-201ENST00000231021 PPP1R37O75864 691 aa5.75□□□□□ -1.49
CDH9-201ENST00000231021 TCF3P15923 654 aa5.75□□□□□ -1.49
CDH9-201ENST00000231021 E2F4Q16254 413 aa5.75□□□□□ -1.49
CDH9-201ENST00000231021 MYH16Q9H6N6 1097 aa5.75□□□□□ -1.49
CDH9-201ENST00000231021 SALL2Q9Y467 1007 aaPredicted RBP5.75□□□□□ -1.49
CDH9-201ENST00000231021 PROCA1Q8NCQ7 364 aaPredicted RBP5.74□□□□□ -1.49
CDH9-201ENST00000231021 DRC1Q96MC2 740 aa5.74□□□□□ -1.49
CDH9-201ENST00000231021 MS4A1P11836 297 aa5.74□□□□□ -1.49
CDH9-201ENST00000231021 ZNF16P17020 682 aaPredicted RBP5.74□□□□□ -1.49
CDH9-201ENST00000231021 HSP90AB4PQ58FF6 505 aa5.74□□□□□ -1.49
CDH9-201ENST00000231021 REPIN1Q9BWE0 567 aaKnown RBP5.74□□□□□ -1.49
CDH9-201ENST00000231021 NACADO15069 1562 aa5.74□□□□□ -1.49
CDH9-201ENST00000231021 FECHP22830 423 aa5.73□□□□□ -1.49
CDH9-201ENST00000231021 SREK1Q8WXA9 508 aaKnown RBP5.73□□□□□ -1.49
CDH9-201ENST00000231021 CC2D2AQ9P2K1 1620 aa5.73□□□□□ -1.49
CDH9-201ENST00000231021 MAFGO15525 162 aa5.73□□□□□ -1.49
CDH9-201ENST00000231021 DPH6Q7L8W6 267 aa5.73□□□□□ -1.49
CDH9-201ENST00000231021 GDPD2Q9HCC8 539 aa5.73□□□□□ -1.49
CDH9-201ENST00000231021 PPFIA4O75335 1185 aa5.72□□□□□ -1.49
CDH9-201ENST00000231021 PTMSP20962 102 aa5.72□□□□□ -1.49
CDH9-201ENST00000231021 RBM46Q8TBY0 533 aaKnown RBP5.72□□□□□ -1.49
CDH9-201ENST00000231021 GIPC2Q8TF65 315 aa5.72□□□□□ -1.49
CDH9-201ENST00000231021 CCDC184Q52MB2 194 aa5.72□□□□□ -1.49
CDH9-201ENST00000231021 RPS6KL1Q9Y6S9 549 aa5.72□□□□□ -1.49
CDH9-201ENST00000231021 SBNO2Q9Y2G9 1366 aa5.72□□□□□ -1.49
CDH9-201ENST00000231021 PITPNM1O00562 1244 aa5.71□□□□□ -1.49
CDH9-201ENST00000231021 NME8Q8N427 588 aa5.71□□□□□ -1.49
CDH9-201ENST00000231021 PMM1Q92871 262 aa5.71□□□□□ -1.49
CDH9-201ENST00000231021 TERF2IPQ9NYB0 399 aa5.71□□□□□ -1.49
CDH9-201ENST00000231021 CECR2Q9BXF3 1484 aa5.71□□□□□ -1.49
CDH9-201ENST00000231021 RBM47A0AV96 593 aaKnown RBP5.71□□□□□ -1.5
CDH9-201ENST00000231021 GORABQ5T7V8 394 aa5.71□□□□□ -1.5
CDH9-201ENST00000231021 CCDC102AQ96A19 550 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms