RNA–Protein interactions for RNA: ENST00000229379.2

COX6A1-201, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COX6A1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-201ENST00000229379 NCOA1Q15788 1441 aa25.04■■□□□ 1.6
COX6A1-201ENST00000229379 CEP152O94986 1710 aa25.04■■□□□ 1.6
COX6A1-201ENST00000229379 KDM5DQ9BY66 1539 aa25.03■■□□□ 1.6
COX6A1-201ENST00000229379 MROH1Q8NDA8 1641 aa25.03■■□□□ 1.6
COX6A1-201ENST00000229379 RNF17Q9BXT8 1623 aaKnown RBP25.03■■□□□ 1.6
COX6A1-201ENST00000229379 APLP2Q06481 763 aa25.01■■□□□ 1.59
COX6A1-201ENST00000229379 CERKQ8TCT0 537 aa25.01■■□□□ 1.59
COX6A1-201ENST00000229379 NCKAP5LQ9HCH0 1330 aa25.01■■□□□ 1.59
COX6A1-201ENST00000229379 ABCC5O15440 1437 aa25.01■■□□□ 1.59
COX6A1-201ENST00000229379 DNMT1P26358 1616 aaKnown RBP24.99■■□□□ 1.59
COX6A1-201ENST00000229379 PPP6R1Q9UPN7 881 aa24.99■■□□□ 1.59
COX6A1-201ENST00000229379 FGD6Q6ZV73 1430 aa24.98■■□□□ 1.59
COX6A1-201ENST00000229379 EIF2AK4Q9P2K8 1649 aaKnown RBP24.97■■□□□ 1.59
COX6A1-201ENST00000229379 PTPRTO14522 1441 aa24.96■■□□□ 1.59
COX6A1-201ENST00000229379 WASHC2CQ9Y4E1 1318 aa24.96■■□□□ 1.59
COX6A1-201ENST00000229379 PZPP20742 1482 aa24.96■■□□□ 1.59
COX6A1-201ENST00000229379 TCOF1Q13428 1488 aaKnown RBP24.96■■□□□ 1.59
COX6A1-201ENST00000229379 ABCC3O15438 1527 aa24.95■■□□□ 1.58
COX6A1-201ENST00000229379 DAPK1P53355 1430 aa24.95■■□□□ 1.58
COX6A1-201ENST00000229379 RRP7BPQ9NSQ0 103 aa24.93■■□□□ 1.58
COX6A1-201ENST00000229379 LTBP4Q8N2S1 1624 aa24.93■■□□□ 1.58
COX6A1-201ENST00000229379 A2ML1A8K2U0 1454 aa24.92■■□□□ 1.58
COX6A1-201ENST00000229379 DMRT2Q9Y5R5 561 aa24.92■■□□□ 1.58
COX6A1-201ENST00000229379 TNRQ92752 1358 aa24.92■■□□□ 1.58
COX6A1-201ENST00000229379 DUOX2Q9NRD8 1548 aa24.91■■□□□ 1.58
COX6A1-201ENST00000229379 CHIC2Q9UKJ5 165 aa24.91■■□□□ 1.58
COX6A1-201ENST00000229379 ZC3H13Q5T200 1668 aaKnown RBP24.9■■□□□ 1.58
COX6A1-201ENST00000229379 FAM135AQ9P2D6 1515 aa24.9■■□□□ 1.58
COX6A1-201ENST00000229379 KIF15Q9NS87 1388 aa24.9■■□□□ 1.58
COX6A1-201ENST00000229379 SHANK2Q9UPX8 1470 aa24.89■■□□□ 1.58
COX6A1-201ENST00000229379 POLR1AO95602 1720 aaPredicted RBP24.89■■□□□ 1.57
COX6A1-201ENST00000229379 PLA2R1Q13018 1463 aa24.87■■□□□ 1.57
COX6A1-201ENST00000229379 NEURL4Q96JN8 1562 aa24.85■■□□□ 1.57
COX6A1-201ENST00000229379 PPARGC1BQ86YN6 1023 aaKnown RBP24.85■■□□□ 1.57
COX6A1-201ENST00000229379 ZNF335Q9H4Z2 1342 aaPredicted RBP24.84■■□□□ 1.57
COX6A1-201ENST00000229379 DEPDC5O75140 1603 aa24.83■■□□□ 1.57
COX6A1-201ENST00000229379 SPATA31D1Q6ZQQ2 1576 aa24.83■■□□□ 1.57
COX6A1-201ENST00000229379 PRDM15P57071 1507 aaPredicted RBP24.82■■□□□ 1.56
COX6A1-201ENST00000229379 ERVK-7P63135 1459 aa24.81■■□□□ 1.56
COX6A1-201ENST00000229379 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.8■■□□□ 1.568e-9■□□□□ 9.6
COX6A1-201ENST00000229379 FAM50AQ14320 339 aaKnown RBP24.8■■□□□ 1.56
COX6A1-201ENST00000229379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.8■■□□□ 1.568e-8■□□□□ 8.4
COX6A1-201ENST00000229379 ERBINQ96RT1 1412 aa24.79■■□□□ 1.56
COX6A1-201ENST00000229379 UGGT1Q9NYU2 1555 aa24.78■■□□□ 1.56
COX6A1-201ENST00000229379 PKD2Q13563 968 aa24.77■■□□□ 1.56
COX6A1-201ENST00000229379 UBR1Q8IWV7 1749 aa24.76■■□□□ 1.55
COX6A1-201ENST00000229379 NLRP1Q9C000 1473 aa24.75■■□□□ 1.55
COX6A1-201ENST00000229379 ADGRL2O95490 1459 aa24.73■■□□□ 1.55
COX6A1-201ENST00000229379 ANKRD30AQ9BXX3 1397 aa24.73■■□□□ 1.55
COX6A1-201ENST00000229379 VWDEQ8N2E2 1590 aa24.71■■□□□ 1.55
COX6A1-201ENST00000229379 STRCP1A6NGW2 1772 aa24.7■■□□□ 1.55
COX6A1-201ENST00000229379 PIK3C2BO00750 1634 aa24.68■■□□□ 1.54
COX6A1-201ENST00000229379 IQGAP1P46940 1657 aa24.68■■□□□ 1.54
COX6A1-201ENST00000229379 THEMISQ8N1K5 641 aaPredicted RBP24.66■■□□□ 1.54
COX6A1-201ENST00000229379 ARHGAP31Q2M1Z3 1444 aa24.66■■□□□ 1.54
COX6A1-201ENST00000229379 SYNMO15061 1565 aa24.65■■□□□ 1.54
COX6A1-201ENST00000229379 ANKLE2Q86XL3 938 aa24.64■■□□□ 1.54
COX6A1-201ENST00000229379 MYO5BQ9ULV0 1848 aa24.63■■□□□ 1.53
COX6A1-201ENST00000229379 NPHP4O75161 1426 aaPredicted RBP24.63■■□□□ 1.53
COX6A1-201ENST00000229379 LMTK2Q8IWU2 1503 aa24.63■■□□□ 1.53
COX6A1-201ENST00000229379 MED14O60244 1454 aa24.62■■□□□ 1.53
COX6A1-201ENST00000229379 EFCAB6Q5THR3 1501 aa24.61■■□□□ 1.53
COX6A1-201ENST00000229379 ANKRD50Q9ULJ7 1429 aa24.61■■□□□ 1.53
COX6A1-201ENST00000229379 IQSEC2Q5JU85 1478 aa24.6■■□□□ 1.53
COX6A1-201ENST00000229379 KANK1Q14678 1352 aa24.6■■□□□ 1.53
COX6A1-201ENST00000229379 LTKP29376 864 aa24.59■■□□□ 1.53
COX6A1-201ENST00000229379 ITGAEP38570 1179 aa24.59■■□□□ 1.53
COX6A1-201ENST00000229379 ARHGAP23Q9P227 1491 aa24.56■■□□□ 1.52
COX6A1-201ENST00000229379 UNC13BO14795 1591 aa24.55■■□□□ 1.52
COX6A1-201ENST00000229379 IDI1Q13907 227 aa24.55■■□□□ 1.52
COX6A1-201ENST00000229379 TET3O43151 1660 aa24.54■■□□□ 1.52
COX6A1-201ENST00000229379 SLIT1O75093 1534 aa24.54■■□□□ 1.52
COX6A1-201ENST00000229379 NOS1P29475 1434 aa24.53■■□□□ 1.52
COX6A1-201ENST00000229379 GCC2Q8IWJ2 1684 aa24.53■■□□□ 1.52
COX6A1-201ENST00000229379 UBAP1LF5GYI3 381 aa24.53■■□□□ 1.52
COX6A1-201ENST00000229379 E9PCH4 1651 aa24.53■■□□□ 1.52
COX6A1-201ENST00000229379 SCAF11Q99590 1463 aaKnown RBP24.52■■□□□ 1.52
COX6A1-201ENST00000229379 XIRP1Q702N8 1843 aaKnown RBP24.51■■□□□ 1.51
COX6A1-201ENST00000229379 ALKQ9UM73 1620 aa24.5■■□□□ 1.51
COX6A1-201ENST00000229379 CPS1P31327 1500 aa24.5■■□□□ 1.51
COX6A1-201ENST00000229379 TXNDC2Q86VQ3 553 aa24.49■■□□□ 1.51
COX6A1-201ENST00000229379 KDM5AP29375 1690 aaKnown RBP24.49■■□□□ 1.51
COX6A1-201ENST00000229379 SENP3Q9H4L4 574 aaPredicted RBP24.48■■□□□ 1.51
COX6A1-201ENST00000229379 ADGRB3O60242 1522 aa24.46■■□□□ 1.51
COX6A1-201ENST00000229379 ROCK1Q13464 1354 aa24.46■■□□□ 1.51
COX6A1-201ENST00000229379 IQGAP3Q86VI3 1631 aa24.46■■□□□ 1.51
COX6A1-201ENST00000229379 TMEM2Q9UHN6 1383 aa24.45■■□□□ 1.5
COX6A1-201ENST00000229379 LRRC7Q96NW7 1537 aa24.44■■□□□ 1.5
COX6A1-201ENST00000229379 STAG3Q9UJ98 1225 aa24.43■■□□□ 1.5
COX6A1-201ENST00000229379 PIP4K2BP78356 416 aa24.42■■□□□ 1.5
COX6A1-201ENST00000229379 TMEM131LA2VDJ0 1609 aa24.41■■□□□ 1.5
COX6A1-201ENST00000229379 RPRD2Q5VT52 1461 aaKnown RBP24.39■■□□□ 1.5
COX6A1-201ENST00000229379 SCAF1Q9H7N4 1312 aaKnown RBP24.38■■□□□ 1.49
COX6A1-201ENST00000229379 RRBP1Q9P2E9 1410 aaKnown RBP24.38■■□□□ 1.49
COX6A1-201ENST00000229379 EID1Q9Y6B2 187 aa24.37■■□□□ 1.49
COX6A1-201ENST00000229379 SLC26A8Q96RN1 970 aa24.36■■□□□ 1.49
COX6A1-201ENST00000229379 NUP155O75694 1391 aa24.35■■□□□ 1.49
COX6A1-201ENST00000229379 DISP3Q9P2K9 1392 aa24.33■■□□□ 1.49
COX6A1-201ENST00000229379 HSPA1LP34931 641 aa24.33■■□□□ 1.49
COX6A1-201ENST00000229379 SLC52A1Q9NWF4 448 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms