RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 KIAA1107Q9UPP5 1409 aa23.79■■□□□ 1.4
CDKN1B-201ENST00000228872 SYCP2Q9BX26 1530 aa23.79■■□□□ 1.4
CDKN1B-201ENST00000228872 RSPH4AQ5TD94 716 aa23.78■■□□□ 1.4
CDKN1B-201ENST00000228872 MAST1Q9Y2H9 1570 aa23.78■■□□□ 1.4
CDKN1B-201ENST00000228872 C9orf84Q5VXU9 1444 aa23.78■■□□□ 1.4
CDKN1B-201ENST00000228872 ANKRD30AQ9BXX3 1397 aa23.76■■□□□ 1.39
CDKN1B-201ENST00000228872 NPM1P06748 294 aaKnown RBP eCLIP23.76■■□□□ 1.39
CDKN1B-201ENST00000228872 ABCC1P33527 1531 aa23.74■■□□□ 1.39
CDKN1B-201ENST00000228872 HNRNPMP52272 730 aaKnown RBP eCLIP23.74■■□□□ 1.39
CDKN1B-201ENST00000228872 RTN4Q9NQC3 1192 aaKnown RBP23.74■■□□□ 1.39
CDKN1B-201ENST00000228872 SPATA31E1Q6ZUB1 1445 aa23.73■■□□□ 1.39
CDKN1B-201ENST00000228872 NBPF8Q3BBV2 869 aa23.73■■□□□ 1.39
CDKN1B-201ENST00000228872 MPHOSPH9Q99550 1183 aa23.72■■□□□ 1.39
CDKN1B-201ENST00000228872 EFCAB2Q5VUJ9 269 aa23.72■■□□□ 1.39
CDKN1B-201ENST00000228872 TSPY4P0CV99 314 aa23.7■■□□□ 1.39
CDKN1B-201ENST00000228872 TSPY10P0CW01 314 aa23.7■■□□□ 1.39
CDKN1B-201ENST00000228872 POLR1AO95602 1720 aaPredicted RBP23.7■■□□□ 1.38
CDKN1B-201ENST00000228872 USP35Q9P2H5 1018 aa23.7■■□□□ 1.38
CDKN1B-201ENST00000228872 ARHGEF12Q9NZN5 1544 aa23.69■■□□□ 1.38
CDKN1B-201ENST00000228872 DHX29Q7Z478 1369 aaKnown RBP23.69■■□□□ 1.38
CDKN1B-201ENST00000228872 NEFMP07197 916 aa23.68■■□□□ 1.38
CDKN1B-201ENST00000228872 NPM2Q86SE8 214 aaKnown RBP23.68■■□□□ 1.38
CDKN1B-201ENST00000228872 PLXNC1O60486 1568 aa23.67■■□□□ 1.38
CDKN1B-201ENST00000228872 LAS1LQ9Y4W2 734 aaKnown RBP23.67■■□□□ 1.38
CDKN1B-201ENST00000228872 FOXD1Q16676 465 aa23.66■■□□□ 1.38
CDKN1B-201ENST00000228872 TEX14Q8IWB6 1497 aa23.65■■□□□ 1.38
CDKN1B-201ENST00000228872 WASHC2CQ9Y4E1 1318 aa23.65■■□□□ 1.38
CDKN1B-201ENST00000228872 ANKRD50Q9ULJ7 1429 aa23.64■■□□□ 1.38
CDKN1B-201ENST00000228872 RPRD2Q5VT52 1461 aaKnown RBP23.64■■□□□ 1.38
CDKN1B-201ENST00000228872 FANCAO15360 1455 aa23.64■■□□□ 1.37
CDKN1B-201ENST00000228872 TCERG1O14776 1098 aaKnown RBP23.64■■□□□ 1.37
CDKN1B-201ENST00000228872 ANKRD30BQ9BXX2 1392 aa23.61■■□□□ 1.37
CDKN1B-201ENST00000228872 KIF15Q9NS87 1388 aa23.61■■□□□ 1.37
CDKN1B-201ENST00000228872 CFAP74Q9C0B2 1584 aa23.61■■□□□ 1.37
CDKN1B-201ENST00000228872 PDE4AP27815 886 aa23.6■■□□□ 1.37
CDKN1B-201ENST00000228872 CYB5RLQ6IPT4 315 aa23.59■■□□□ 1.37
CDKN1B-201ENST00000228872 PPM1GO15355 546 aaPredicted RBP23.58■■□□□ 1.37
CDKN1B-201ENST00000228872 CNGB1Q14028 1251 aaPredicted RBP23.58■■□□□ 1.37
CDKN1B-201ENST00000228872 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.58■■□□□ 1.37
CDKN1B-201ENST00000228872 SENP3-EIF4A1A0A087X0R7 540 aa23.58■■□□□ 1.37
CDKN1B-201ENST00000228872 TRAPPC8Q9Y2L5 1435 aa23.57■■□□□ 1.36
CDKN1B-201ENST00000228872 PNISRQ8TF01 805 aaKnown RBP23.57■■□□□ 1.36
CDKN1B-201ENST00000228872 KDM5DQ9BY66 1539 aa23.57■■□□□ 1.36
CDKN1B-201ENST00000228872 PZPP20742 1482 aa23.57■■□□□ 1.36
CDKN1B-201ENST00000228872 BACH2Q9BYV9 841 aa23.56■■□□□ 1.36
CDKN1B-201ENST00000228872 RRP1P56182 461 aaKnown RBP23.55■■□□□ 1.36
CDKN1B-201ENST00000228872 SLC4A1APQ9BWU0 796 aaKnown RBP23.55■■□□□ 1.36
CDKN1B-201ENST00000228872 EXOC6Q8TAG9 804 aa23.55■■□□□ 1.36
CDKN1B-201ENST00000228872 RTEL1-TNFRSF6BF6WH68 1400 aa23.55■■□□□ 1.36
CDKN1B-201ENST00000228872 CD109Q6YHK3 1445 aa23.54■■□□□ 1.36
CDKN1B-201ENST00000228872 ADGRL1O94910 1474 aa23.54■■□□□ 1.36
CDKN1B-201ENST00000228872 DUOX2Q9NRD8 1548 aa23.54■■□□□ 1.36
CDKN1B-201ENST00000228872 MS4A1P11836 297 aa23.53■■□□□ 1.36
CDKN1B-201ENST00000228872 GLI2P10070 1586 aa23.53■■□□□ 1.36
CDKN1B-201ENST00000228872 ZFYVE16Q7Z3T8 1539 aa23.52■■□□□ 1.36
CDKN1B-201ENST00000228872 MAP3K4Q9Y6R4 1608 aa23.52■■□□□ 1.36
CDKN1B-201ENST00000228872 INO80Q9ULG1 1556 aaPredicted RBP23.52■■□□□ 1.36
CDKN1B-201ENST00000228872 UNC13BO14795 1591 aa23.51■■□□□ 1.35
CDKN1B-201ENST00000228872 TMC1Q8TDI8 760 aa23.49■■□□□ 1.35
CDKN1B-201ENST00000228872 ERBINQ96RT1 1412 aa23.49■■□□□ 1.35
CDKN1B-201ENST00000228872 SCAPERQ9BY12 1400 aa23.48■■□□□ 1.35
CDKN1B-201ENST00000228872 POLR3GLQ9BT43 218 aa23.48■■□□□ 1.35
CDKN1B-201ENST00000228872 BCORL1Q5H9F3 1711 aa23.48■■□□□ 1.35
CDKN1B-201ENST00000228872 LRPPRCP42704 1394 aaKnown RBP23.47■■□□□ 1.35
CDKN1B-201ENST00000228872 BRPF3Q9ULD4 1205 aa23.46■■□□□ 1.35
CDKN1B-201ENST00000228872 ATP7AQ04656 1500 aa23.46■■□□□ 1.35
CDKN1B-201ENST00000228872 USP47Q96K76 1375 aa23.45■■□□□ 1.34
CDKN1B-201ENST00000228872 SPAG9O60271 1321 aaKnown RBP23.45■■□□□ 1.34
CDKN1B-201ENST00000228872 NEO1Q92859 1461 aa23.45■■□□□ 1.34
CDKN1B-201ENST00000228872 ARID4BQ4LE39 1312 aaPredicted RBP23.44■■□□□ 1.34
CDKN1B-201ENST00000228872 DIP2BQ9P265 1576 aa23.44■■□□□ 1.34
CDKN1B-201ENST00000228872 RCAN3Q9UKA8 241 aa23.44■■□□□ 1.34
CDKN1B-201ENST00000228872 GSE1Q14687 1217 aa23.43■■□□□ 1.34
CDKN1B-201ENST00000228872 AFAP1Q8N556 730 aa23.43■■□□□ 1.34
CDKN1B-201ENST00000228872 UBE2Q2Q8WVN8 375 aa23.43■■□□□ 1.34
CDKN1B-201ENST00000228872 NUP155O75694 1391 aa23.42■■□□□ 1.34
CDKN1B-201ENST00000228872 ZNF518AQ6AHZ1 1483 aa23.42■■□□□ 1.34
CDKN1B-201ENST00000228872 MAGI2Q86UL8 1455 aa23.42■■□□□ 1.34
CDKN1B-201ENST00000228872 DDRGK1Q96HY6 314 aa23.42■■□□□ 1.34
CDKN1B-201ENST00000228872 KDM5CP41229 1560 aa23.41■■□□□ 1.34
CDKN1B-201ENST00000228872 IQGAP3Q86VI3 1631 aa23.41■■□□□ 1.34
CDKN1B-201ENST00000228872 FAM135AQ9P2D6 1515 aa23.4■■□□□ 1.34
CDKN1B-201ENST00000228872 KIDINS220Q9ULH0 1771 aa23.39■■□□□ 1.34
CDKN1B-201ENST00000228872 ROCK2O75116 1388 aaKnown RBP23.38■■□□□ 1.33
CDKN1B-201ENST00000228872 POGZQ7Z3K3 1410 aa23.38■■□□□ 1.33
CDKN1B-201ENST00000228872 BRD4O60885 1362 aaPredicted RBP23.38■■□□□ 1.33
CDKN1B-201ENST00000228872 PKD2Q13563 968 aa23.37■■□□□ 1.33
CDKN1B-201ENST00000228872 EIF2AK4Q9P2K8 1649 aaKnown RBP23.36■■□□□ 1.33
CDKN1B-201ENST00000228872 DEPDC5O75140 1603 aa23.36■■□□□ 1.33
CDKN1B-201ENST00000228872 NFKBIBQ15653 356 aa23.36■■□□□ 1.33
CDKN1B-201ENST00000228872 MYBBP1AQ9BQG0 1328 aaKnown RBP23.34■■□□□ 1.33
CDKN1B-201ENST00000228872 HECW2Q9P2P5 1572 aa23.33■■□□□ 1.33
CDKN1B-201ENST00000228872 MLH3Q9UHC1 1453 aa23.32■■□□□ 1.32
CDKN1B-201ENST00000228872 FRAT1Q92837 279 aaPredicted RBP23.31■■□□□ 1.32
CDKN1B-201ENST00000228872 RICTORQ6R327 1708 aa23.31■■□□□ 1.32
CDKN1B-201ENST00000228872 PDE3BQ13370 1112 aa23.31■■□□□ 1.32
CDKN1B-201ENST00000228872 ZNF326Q5BKZ1 582 aaKnown RBP23.31■■□□□ 1.32
CDKN1B-201ENST00000228872 PPRC1Q5VV67 1664 aaKnown RBP23.31■■□□□ 1.32
CDKN1B-201ENST00000228872 KTN1Q86UP2 1357 aaKnown RBP23.3■■□□□ 1.32
CDKN1B-201ENST00000228872 RALBP1Q15311 655 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms