RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 FANCAO15360 1455 aa26.82■■□□□ 1.88
YBX3-201ENST00000228251 OSCARQ8IYS5 282 aa26.79■■□□□ 1.88
YBX3-201ENST00000228251 USP47Q96K76 1375 aa26.78■■□□□ 1.88
YBX3-201ENST00000228251 TRPM1Q7Z4N2 1603 aa26.78■■□□□ 1.88
YBX3-201ENST00000228251 ATP7AQ04656 1500 aa26.77■■□□□ 1.88
YBX3-201ENST00000228251 KIF7Q2M1P5 1343 aa26.77■■□□□ 1.88
YBX3-201ENST00000228251 CCDC144AA2RUR9 1427 aa26.77■■□□□ 1.88
YBX3-201ENST00000228251 SPAG9O60271 1321 aaKnown RBP26.75■■□□□ 1.87
YBX3-201ENST00000228251 E9PCH4 1651 aa26.74■■□□□ 1.87
YBX3-201ENST00000228251 VWDEQ8N2E2 1590 aa26.73■■□□□ 1.87
YBX3-201ENST00000228251 EIF2AK4Q9P2K8 1649 aaKnown RBP26.72■■□□□ 1.87
YBX3-201ENST00000228251 AFAP1Q8N556 730 aa26.71■■□□□ 1.87
YBX3-201ENST00000228251 ADGRL1O94910 1474 aa26.71■■□□□ 1.87
YBX3-201ENST00000228251 A2MP01023 1474 aa26.71■■□□□ 1.87
YBX3-201ENST00000228251 PRAG1Q86YV5 1406 aa26.71■■□□□ 1.87
YBX3-201ENST00000228251 LAMC1P11047 1609 aa26.7■■□□□ 1.87
YBX3-201ENST00000228251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.69■■□□□ 1.861e-9■■□□□ 14.4
YBX3-201ENST00000228251 TET3O43151 1660 aa26.68■■□□□ 1.86
YBX3-201ENST00000228251 ARID4BQ4LE39 1312 aaPredicted RBP26.67■■□□□ 1.86
YBX3-201ENST00000228251 KIDINS220Q9ULH0 1771 aa26.67■■□□□ 1.86
YBX3-201ENST00000228251 SCAPERQ9BY12 1400 aa26.67■■□□□ 1.86
YBX3-201ENST00000228251 MROH1Q8NDA8 1641 aa26.66■■□□□ 1.86
YBX3-201ENST00000228251 ZNF326Q5BKZ1 582 aaKnown RBP26.66■■□□□ 1.86
YBX3-201ENST00000228251 SPHKAPQ2M3C7 1700 aa26.65■■□□□ 1.86
YBX3-201ENST00000228251 CFAP74Q9C0B2 1584 aa26.65■■□□□ 1.86
YBX3-201ENST00000228251 DCAF11Q8TEB1 546 aa26.65■■□□□ 1.86
YBX3-201ENST00000228251 TRPM2O94759 1503 aa26.65■■□□□ 1.86
YBX3-201ENST00000228251 PRDM15P57071 1507 aaPredicted RBP26.64■■□□□ 1.86
YBX3-201ENST00000228251 GPRASP1Q5JY77 1395 aa26.63■■□□□ 1.85
YBX3-201ENST00000228251 CEP152O94986 1710 aa26.63■■□□□ 1.85
YBX3-201ENST00000228251 PTPRTO14522 1441 aa26.61■■□□□ 1.85
YBX3-201ENST00000228251 PRKRIP1Q9H875 184 aaPredicted RBP26.61■■□□□ 1.85
YBX3-201ENST00000228251 DHX29Q7Z478 1369 aaKnown RBP26.6■■□□□ 1.85
YBX3-201ENST00000228251 CARD11Q9BXL7 1154 aa26.59■■□□□ 1.85
YBX3-201ENST00000228251 KDM2AQ9Y2K7 1162 aa26.59■■□□□ 1.85
YBX3-201ENST00000228251 RNF17Q9BXT8 1623 aaKnown RBP26.59■■□□□ 1.85
YBX3-201ENST00000228251 ZNF518AQ6AHZ1 1483 aa26.57■■□□□ 1.84
YBX3-201ENST00000228251 CLTCL1P53675 1640 aa26.56■■□□□ 1.84
YBX3-201ENST00000228251 ROCK2O75116 1388 aaKnown RBP26.55■■□□□ 1.84
YBX3-201ENST00000228251 NEURL4Q96JN8 1562 aa26.54■■□□□ 1.84
YBX3-201ENST00000228251 CD109Q6YHK3 1445 aa26.52■■□□□ 1.84
YBX3-201ENST00000228251 NPM1P06748 294 aaKnown RBP eCLIP26.52■■□□□ 1.84
YBX3-201ENST00000228251 MADDQ8WXG6 1647 aa26.52■■□□□ 1.84
YBX3-201ENST00000228251 POGZQ7Z3K3 1410 aa26.51■■□□□ 1.83
YBX3-201ENST00000228251 CCDC184Q52MB2 194 aa26.49■■□□□ 1.83
YBX3-201ENST00000228251 LMTK2Q8IWU2 1503 aa26.48■■□□□ 1.83
YBX3-201ENST00000228251 ST20-MTHFSA0A0A6YYL1 179 aa26.48■■□□□ 1.83
YBX3-201ENST00000228251 RGL3Q3MIN7 710 aa26.48■■□□□ 1.83
YBX3-201ENST00000228251 MLH3Q9UHC1 1453 aa26.48■■□□□ 1.83
YBX3-201ENST00000228251 EFCAB6Q5THR3 1501 aa26.48■■□□□ 1.83
YBX3-201ENST00000228251 SUPT16HQ9Y5B9 1047 aaKnown RBP26.48■■□□□ 1.83
YBX3-201ENST00000228251 FRMPD1Q5SYB0 1578 aa26.48■■□□□ 1.83
YBX3-201ENST00000228251 HECW2Q9P2P5 1572 aa26.47■■□□□ 1.83
YBX3-201ENST00000228251 KANK1Q14678 1352 aa26.46■■□□□ 1.83
YBX3-201ENST00000228251 PPRC1Q5VV67 1664 aaKnown RBP26.45■■□□□ 1.83
YBX3-201ENST00000228251 NBPF1Q3BBV0 1214 aa26.45■■□□□ 1.82
YBX3-201ENST00000228251 NEO1Q92859 1461 aa26.43■■□□□ 1.82
YBX3-201ENST00000228251 IQGAP1P46940 1657 aa26.43■■□□□ 1.82
YBX3-201ENST00000228251 ABCA6Q8N139 1617 aa26.42■■□□□ 1.82
YBX3-201ENST00000228251 KIF3BO15066 747 aa26.41■■□□□ 1.82
YBX3-201ENST00000228251 MAP3K4Q9Y6R4 1608 aa26.41■■□□□ 1.82
YBX3-201ENST00000228251 COL17A1Q9UMD9 1497 aaPredicted RBP26.41■■□□□ 1.82
YBX3-201ENST00000228251 KIAA1210Q9ULL0 1709 aa26.39■■□□□ 1.82
YBX3-201ENST00000228251 IFT172Q9UG01 1749 aa26.39■■□□□ 1.81
YBX3-201ENST00000228251 STAC3Q96MF2 364 aa26.36■■□□□ 1.81
YBX3-201ENST00000228251 KIF1BO60333 1816 aa26.36■■□□□ 1.81
YBX3-201ENST00000228251 RICTORQ6R327 1708 aa26.36■■□□□ 1.81
YBX3-201ENST00000228251 TESK2Q96S53 571 aa26.35■■□□□ 1.81
YBX3-201ENST00000228251 GLI2P10070 1586 aa26.35■■□□□ 1.81
YBX3-201ENST00000228251 HNRNPUQ00839 825 aaKnown RBP eCLIP26.33■■□□□ 1.81
YBX3-201ENST00000228251 MRS2Q9HD23 443 aa26.33■■□□□ 1.81
YBX3-201ENST00000228251 UGGT1Q9NYU2 1555 aa26.32■■□□□ 1.8
YBX3-201ENST00000228251 MROH2AA6NES4 1674 aa26.32■■□□□ 1.8
YBX3-201ENST00000228251 MYOM2P54296 1465 aa26.3■■□□□ 1.8
YBX3-201ENST00000228251 DIP2CQ9Y2E4 1556 aa26.29■■□□□ 1.8
YBX3-201ENST00000228251 RIMBP3CA6NJZ7 1639 aa26.29■■□□□ 1.8
YBX3-201ENST00000228251 RIMBP3BA6NNM3 1639 aa26.29■■□□□ 1.8
YBX3-201ENST00000228251 RIMBP3Q9UFD9 1639 aa26.29■■□□□ 1.8
YBX3-201ENST00000228251 POLR3GLQ9BT43 218 aa26.29■■□□□ 1.8
YBX3-201ENST00000228251 KTN1Q86UP2 1357 aaKnown RBP26.28■■□□□ 1.8
YBX3-201ENST00000228251 DISP3Q9P2K9 1392 aa26.28■■□□□ 1.8
YBX3-201ENST00000228251 MYT1LQ9UL68 1186 aa26.28■■□□□ 1.8
YBX3-201ENST00000228251 ADGRB3O60242 1522 aa26.26■■□□□ 1.79
YBX3-201ENST00000228251 ABCC3O15438 1527 aa26.25■■□□□ 1.79
YBX3-201ENST00000228251 NRXN1Q9ULB1 1477 aa26.24■■□□□ 1.79
YBX3-201ENST00000228251 NPATQ14207 1427 aa26.23■■□□□ 1.79
YBX3-201ENST00000228251 SCAF11Q99590 1463 aaKnown RBP26.23■■□□□ 1.79
YBX3-201ENST00000228251 CAMSAP1Q5T5Y3 1602 aa26.22■■□□□ 1.79
YBX3-201ENST00000228251 ZBED9Q6R2W3 1325 aa26.21■■□□□ 1.79
YBX3-201ENST00000228251 FAM9BQ8IZU0 186 aa26.2■■□□□ 1.79
YBX3-201ENST00000228251 PER1O15534 1290 aaPredicted RBP26.2■■□□□ 1.78
YBX3-201ENST00000228251 SIGLEC1Q9BZZ2 1709 aa26.2■■□□□ 1.78
YBX3-201ENST00000228251 PPLO60437 1756 aa26.18■■□□□ 1.78
YBX3-201ENST00000228251 PARD3Q8TEW0 1356 aa26.18■■□□□ 1.78
YBX3-201ENST00000228251 DIP2BQ9P265 1576 aa26.17■■□□□ 1.78
YBX3-201ENST00000228251 ZC3H13Q5T200 1668 aaKnown RBP26.17■■□□□ 1.78
YBX3-201ENST00000228251 PELP1Q8IZL8 1130 aaKnown RBP26.17■■□□□ 1.78
YBX3-201ENST00000228251 PIK3C2BO00750 1634 aa26.16■■□□□ 1.78
YBX3-201ENST00000228251 RALBP1Q15311 655 aa26.16■■□□□ 1.78
YBX3-201ENST00000228251 ZMYM4Q5VZL5 1548 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms