RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 KIF7Q2M1P5 1343 aa15.05■□□□□ -0
CCND1-201ENST00000227507 SUPT6HQ7KZ85 1726 aaKnown RBP15.04■□□□□ -0
CCND1-201ENST00000227507 VSIG10Q8N0Z9 540 aa15.04■□□□□ -0
CCND1-201ENST00000227507 TARBP1Q13395 1621 aaKnown RBP15.04■□□□□ -0
CCND1-201ENST00000227507 PBRM1Q86U86 1689 aa15.03■□□□□ -0
CCND1-201ENST00000227507 USP35Q9P2H5 1018 aa15.03■□□□□ -0
CCND1-201ENST00000227507 UGGT2Q9NYU1 1516 aa15.02■□□□□ -0
CCND1-201ENST00000227507 CD109Q6YHK3 1445 aa15.02■□□□□ -0
CCND1-201ENST00000227507 CCDC144AA2RUR9 1427 aa15.02■□□□□ -0
CCND1-201ENST00000227507 SCAPERQ9BY12 1400 aa15.02■□□□□ -0
CCND1-201ENST00000227507 PDE4CQ08493 712 aa15.02□□□□□ -0.01
CCND1-201ENST00000227507 ARHGEF11O15085 1522 aa15.02□□□□□ -0.01
CCND1-201ENST00000227507 EID1Q9Y6B2 187 aa15.01□□□□□ -0.01
CCND1-201ENST00000227507 CTTNBP2Q8WZ74 1663 aa15.01□□□□□ -0.01
CCND1-201ENST00000227507 RAPGEF3O95398 923 aa15.01□□□□□ -0.01
CCND1-201ENST00000227507 FRAT1Q92837 279 aaPredicted RBP15.01□□□□□ -0.01
CCND1-201ENST00000227507 RRP1P56182 461 aaKnown RBP15□□□□□ -0.01
CCND1-201ENST00000227507 NFKBIBQ15653 356 aa15□□□□□ -0.01
CCND1-201ENST00000227507 NBPF8Q3BBV2 869 aa15□□□□□ -0.01
CCND1-201ENST00000227507 MAP3K1Q13233 1512 aa15□□□□□ -0.01
CCND1-201ENST00000227507 C9orf84Q5VXU9 1444 aa15□□□□□ -0.01
CCND1-201ENST00000227507 TMF1P82094 1093 aa14.98□□□□□ -0.01
CCND1-201ENST00000227507 STK26Q9P289 416 aa14.98□□□□□ -0.01
CCND1-201ENST00000227507 KNSTRNQ9Y448 316 aa14.97□□□□□ -0.01
CCND1-201ENST00000227507 KIF14Q15058 1648 aa14.97□□□□□ -0.01
CCND1-201ENST00000227507 THOC2Q8NI27 1593 aaKnown RBP14.97□□□□□ -0.01
CCND1-201ENST00000227507 BACH2Q9BYV9 841 aa14.97□□□□□ -0.01
CCND1-201ENST00000227507 KIAA0556O60303 1618 aa14.96□□□□□ -0.01
CCND1-201ENST00000227507 SAFB2Q14151 953 aaKnown RBP eCLIP14.96□□□□□ -0.02
CCND1-201ENST00000227507 RAPGEF6Q8TEU7 1601 aa14.95□□□□□ -0.02
CCND1-201ENST00000227507 ROCK2O75116 1388 aaKnown RBP14.95□□□□□ -0.02
CCND1-201ENST00000227507 ATP10BO94823 1461 aa14.94□□□□□ -0.02
CCND1-201ENST00000227507 WDR43Q15061 677 aaKnown RBP eCLIP14.94□□□□□ -0.02
CCND1-201ENST00000227507 NUTM2DQ5VT03 806 aaPredicted RBP14.94□□□□□ -0.02
CCND1-201ENST00000227507 CDCA7LQ96GN5 454 aa14.93□□□□□ -0.02
CCND1-201ENST00000227507 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.93□□□□□ -0.022e-6■□□□□ 9.2
CCND1-201ENST00000227507 SRPK2P78362 688 aaKnown RBP14.93□□□□□ -0.02
CCND1-201ENST00000227507 SMG6Q86US8 1419 aaKnown RBP14.93□□□□□ -0.02
CCND1-201ENST00000227507 CC2D1BQ5T0F9 858 aaKnown RBP14.93□□□□□ -0.02
CCND1-201ENST00000227507 DAPK1P53355 1430 aa14.93□□□□□ -0.02
CCND1-201ENST00000227507 PDIA4P13667 645 aaKnown RBP14.92□□□□□ -0.02
CCND1-201ENST00000227507 CRBNQ96SW2 442 aa14.92□□□□□ -0.02
CCND1-201ENST00000227507 NUP153P49790 1475 aaKnown RBP14.92□□□□□ -0.02
CCND1-201ENST00000227507 FRAT2O75474 233 aaPredicted RBP14.92□□□□□ -0.02
CCND1-201ENST00000227507 VGFO15240 615 aaPredicted RBP14.92□□□□□ -0.02
CCND1-201ENST00000227507 NAP1L5Q96NT1 182 aaPredicted RBP14.91□□□□□ -0.02
CCND1-201ENST00000227507 SLKQ9H2G2 1235 aaPredicted RBP14.91□□□□□ -0.02
CCND1-201ENST00000227507 ADGRL1O94910 1474 aa14.9□□□□□ -0.02
CCND1-201ENST00000227507 CCDC141Q6ZP82 1450 aa14.9□□□□□ -0.02
CCND1-201ENST00000227507 ASXL2Q76L83 1435 aa14.9□□□□□ -0.02
CCND1-201ENST00000227507 KLHL34Q8N239 644 aa14.9□□□□□ -0.02
CCND1-201ENST00000227507 PNISRQ8TF01 805 aaKnown RBP14.9□□□□□ -0.02
CCND1-201ENST00000227507 HAP1P54257 671 aaPredicted RBP14.9□□□□□ -0.02
CCND1-201ENST00000227507 RSPH6AQ9H0K4 717 aa14.9□□□□□ -0.02
CCND1-201ENST00000227507 ZBTB7CA1YPR0 619 aa14.89□□□□□ -0.03
CCND1-201ENST00000227507 ZMYND15Q9H091 742 aa14.89□□□□□ -0.03
CCND1-201ENST00000227507 LMOD2Q6P5Q4 547 aa14.89□□□□□ -0.03
CCND1-201ENST00000227507 PTPRKQ15262 1439 aa14.88□□□□□ -0.03
CCND1-201ENST00000227507 DISP1Q96F81 1524 aa14.88□□□□□ -0.03
CCND1-201ENST00000227507 CAMSAP2Q08AD1 1489 aa14.88□□□□□ -0.03
CCND1-201ENST00000227507 SPRYD3Q8NCJ5 442 aa14.88□□□□□ -0.03
CCND1-201ENST00000227507 HFM1A2PYH4 1435 aa14.87□□□□□ -0.03
CCND1-201ENST00000227507 EIF3AQ14152 1382 aaKnown RBP14.87□□□□□ -0.03
CCND1-201ENST00000227507 MS4A1P11836 297 aa14.87□□□□□ -0.03
CCND1-201ENST00000227507 CANXP27824 592 aaKnown RBP14.87□□□□□ -0.03
CCND1-201ENST00000227507 CEP170Q5SW79 1584 aa14.87□□□□□ -0.03
CCND1-201ENST00000227507 FANCAO15360 1455 aa14.87□□□□□ -0.03
CCND1-201ENST00000227507 NAIPQ13075 1403 aa14.87□□□□□ -0.03
CCND1-201ENST00000227507 CFAP53Q96M91 514 aa14.86□□□□□ -0.03
CCND1-201ENST00000227507 GZF1Q9H116 711 aaPredicted RBP14.85□□□□□ -0.03
CCND1-201ENST00000227507 WDR7Q9Y4E6 1490 aa14.84□□□□□ -0.03
CCND1-201ENST00000227507 POGZQ7Z3K3 1410 aa14.84□□□□□ -0.03
CCND1-201ENST00000227507 ROCK1Q13464 1354 aa14.84□□□□□ -0.03
CCND1-201ENST00000227507 ST20-MTHFSA0A0A6YYL1 179 aa14.84□□□□□ -0.03
CCND1-201ENST00000227507 PTPN23Q9H3S7 1636 aa14.83□□□□□ -0.03
CCND1-201ENST00000227507 DENND4BO75064 1496 aaPredicted RBP14.83□□□□□ -0.04
CCND1-201ENST00000227507 ABCC2Q92887 1545 aa14.83□□□□□ -0.04
CCND1-201ENST00000227507 USP47Q96K76 1375 aa14.82□□□□□ -0.04
CCND1-201ENST00000227507 GPATCH8Q9UKJ3 1502 aaKnown RBP14.82□□□□□ -0.04
CCND1-201ENST00000227507 STAC3Q96MF2 364 aa14.82□□□□□ -0.04
CCND1-201ENST00000227507 BCL11BQ9C0K0 894 aaPredicted RBP14.82□□□□□ -0.04
CCND1-201ENST00000227507 TRAK1Q9UPV9 953 aa14.82□□□□□ -0.04
CCND1-201ENST00000227507 NCOA1Q15788 1441 aa14.82□□□□□ -0.04
CCND1-201ENST00000227507 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.81□□□□□ -0.04
CCND1-201ENST00000227507 ABCC5O15440 1437 aa14.81□□□□□ -0.04
CCND1-201ENST00000227507 PLCH2O75038 1416 aa14.81□□□□□ -0.04
CCND1-201ENST00000227507 HDGFL2Q7Z4V5 671 aaPredicted RBP14.8□□□□□ -0.04
CCND1-201ENST00000227507 C20orf194Q5TEA3 1177 aa14.78□□□□□ -0.04
CCND1-201ENST00000227507 MYBBP1AQ9BQG0 1328 aaKnown RBP14.78□□□□□ -0.04
CCND1-201ENST00000227507 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.78□□□□□ -0.04
CCND1-201ENST00000227507 TEX14Q8IWB6 1497 aa14.78□□□□□ -0.04
CCND1-201ENST00000227507 FAM161AQ3B820 660 aa14.78□□□□□ -0.04
CCND1-201ENST00000227507 TNNT2P45379 298 aaPredicted RBP14.78□□□□□ -0.04
CCND1-201ENST00000227507 RALBP1Q15311 655 aa14.77□□□□□ -0.05
CCND1-201ENST00000227507 NLRP13Q86W25 1043 aa14.77□□□□□ -0.05
CCND1-201ENST00000227507 BECN1Q14457 450 aa14.76□□□□□ -0.05
CCND1-201ENST00000227507 SLC52A1Q9NWF4 448 aa14.76□□□□□ -0.05
CCND1-201ENST00000227507 KIAA1107Q9UPP5 1409 aa14.76□□□□□ -0.05
CCND1-201ENST00000227507 UPF2Q9HAU5 1272 aaKnown RBP14.76□□□□□ -0.05
CCND1-201ENST00000227507 SAMD9Q5K651 1589 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms