RNA–Protein interactions for RNA: ENST00000225844.6

CCL13-201, Transcript of C-C motif chemokine ligand 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL13, Length 851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13-201ENST00000225844 REREQ9P2R6 1566 aa11.69□□□□□ -0.54
CCL13-201ENST00000225844 AGLP35573 1532 aa11.69□□□□□ -0.54
CCL13-201ENST00000225844 PKD2Q13563 968 aa11.68□□□□□ -0.54
CCL13-201ENST00000225844 CFDP1Q9UEE9 299 aaPredicted RBP11.68□□□□□ -0.54
CCL13-201ENST00000225844 GPATCH8Q9UKJ3 1502 aaKnown RBP11.68□□□□□ -0.54
CCL13-201ENST00000225844 NPATQ14207 1427 aa11.68□□□□□ -0.54
CCL13-201ENST00000225844 ZMYM3Q14202 1370 aa11.67□□□□□ -0.54
CCL13-201ENST00000225844 HSPA1LP34931 641 aa11.67□□□□□ -0.54
CCL13-201ENST00000225844 ZNF777Q9ULD5 760 aaPredicted RBP11.67□□□□□ -0.54
CCL13-201ENST00000225844 PLEKHH2Q8IVE3 1493 aa11.66□□□□□ -0.54
CCL13-201ENST00000225844 MYOM3Q5VTT5 1437 aa11.66□□□□□ -0.54
CCL13-201ENST00000225844 KIAA1107Q9UPP5 1409 aa11.65□□□□□ -0.54
CCL13-201ENST00000225844 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.65□□□□□ -0.55
CCL13-201ENST00000225844 ATXN8OSP0DMR3 200 aa11.64□□□□□ -0.55
CCL13-201ENST00000225844 ABCC1P33527 1531 aa11.64□□□□□ -0.55
CCL13-201ENST00000225844 SPAG9O60271 1321 aaKnown RBP11.63□□□□□ -0.55
CCL13-201ENST00000225844 TOM1O60784 492 aa11.63□□□□□ -0.55
CCL13-201ENST00000225844 DSG3P32926 999 aa11.63□□□□□ -0.55
CCL13-201ENST00000225844 GGT6Q6P531 493 aa11.63□□□□□ -0.55
CCL13-201ENST00000225844 ITSN2Q9NZM3 1697 aa11.62□□□□□ -0.55
CCL13-201ENST00000225844 PLA2R1Q13018 1463 aa11.62□□□□□ -0.55
CCL13-201ENST00000225844 PREX2Q70Z35 1606 aa11.61□□□□□ -0.55
CCL13-201ENST00000225844 ZNF219Q9P2Y4 722 aaPredicted RBP11.61□□□□□ -0.55
CCL13-201ENST00000225844 MED1Q15648 1581 aaPredicted RBP11.61□□□□□ -0.55
CCL13-201ENST00000225844 ABCB7O75027 752 aa11.6□□□□□ -0.55
CCL13-201ENST00000225844 HNRNPMP52272 730 aaKnown RBP eCLIP11.6□□□□□ -0.55
CCL13-201ENST00000225844 FGD6Q6ZV73 1430 aa11.6□□□□□ -0.55
CCL13-201ENST00000225844 TCOF1Q13428 1488 aaKnown RBP11.59□□□□□ -0.55
CCL13-201ENST00000225844 PTPRKQ15262 1439 aa11.59□□□□□ -0.55
CCL13-201ENST00000225844 KIDINS220Q9ULH0 1771 aa11.59□□□□□ -0.55
CCL13-201ENST00000225844 CEP170BQ9Y4F5 1589 aaPredicted RBP11.58□□□□□ -0.55
CCL13-201ENST00000225844 CDC42BPAQ5VT25 1732 aa11.58□□□□□ -0.56
CCL13-201ENST00000225844 CDC42BPBQ9Y5S2 1711 aa11.58□□□□□ -0.56
CCL13-201ENST00000225844 RRBP1Q9P2E9 1410 aaKnown RBP11.58□□□□□ -0.56
CCL13-201ENST00000225844 SAMD9LQ8IVG5 1584 aa11.58□□□□□ -0.56
CCL13-201ENST00000225844 MYO3AQ8NEV4 1616 aa11.57□□□□□ -0.56
CCL13-201ENST00000225844 TSPY4P0CV99 314 aa11.57□□□□□ -0.56
CCL13-201ENST00000225844 TSPY10P0CW01 314 aa11.57□□□□□ -0.56
CCL13-201ENST00000225844 MROH2AA6NES4 1674 aa11.56□□□□□ -0.56
CCL13-201ENST00000225844 A2MP01023 1474 aa11.56□□□□□ -0.56
CCL13-201ENST00000225844 SYCP2Q9BX26 1530 aa11.55□□□□□ -0.56
CCL13-201ENST00000225844 CLTCQ00610 1675 aaKnown RBP11.55□□□□□ -0.56
CCL13-201ENST00000225844 RTEL1-TNFRSF6BF6WH68 1400 aa11.54□□□□□ -0.56
CCL13-201ENST00000225844 PPARGC1BQ86YN6 1023 aaKnown RBP11.54□□□□□ -0.56
CCL13-201ENST00000225844 A2ML1A8K2U0 1454 aa11.54□□□□□ -0.56
CCL13-201ENST00000225844 CAMSAP2Q08AD1 1489 aa11.54□□□□□ -0.56
CCL13-201ENST00000225844 MBD5Q9P267 1494 aa11.54□□□□□ -0.56
CCL13-201ENST00000225844 CPS1P31327 1500 aa11.54□□□□□ -0.56
CCL13-201ENST00000225844 ZNF142P52746 1687 aaPredicted RBP11.53□□□□□ -0.56
CCL13-201ENST00000225844 SHANK2Q9UPX8 1470 aa11.53□□□□□ -0.56
CCL13-201ENST00000225844 ANKLE2Q86XL3 938 aa11.53□□□□□ -0.56
CCL13-201ENST00000225844 ATP7AQ04656 1500 aa11.53□□□□□ -0.56
CCL13-201ENST00000225844 ZNF644Q9H582 1327 aaPredicted RBP11.53□□□□□ -0.56
CCL13-201ENST00000225844 ARHGEF5Q12774 1597 aa11.53□□□□□ -0.56
CCL13-201ENST00000225844 PTPN23Q9H3S7 1636 aa11.53□□□□□ -0.56
CCL13-201ENST00000225844 ACIN1Q9UKV3 1341 aaKnown RBP11.52□□□□□ -0.57
CCL13-201ENST00000225844 TNRQ92752 1358 aa11.52□□□□□ -0.57
CCL13-201ENST00000225844 CCDC141Q6ZP82 1450 aa11.51□□□□□ -0.57
CCL13-201ENST00000225844 FAM50AQ14320 339 aaKnown RBP11.51□□□□□ -0.57
CCL13-201ENST00000225844 FBXO31Q5XUX0 539 aaPredicted RBP11.51□□□□□ -0.57
CCL13-201ENST00000225844 POLA2Q14181 598 aa11.5□□□□□ -0.57
CCL13-201ENST00000225844 PLXNC1O60486 1568 aa11.5□□□□□ -0.57
CCL13-201ENST00000225844 DNMT1P26358 1616 aaKnown RBP11.49□□□□□ -0.57
CCL13-201ENST00000225844 KIF3BO15066 747 aa11.48□□□□□ -0.57
CCL13-201ENST00000225844 THEMISQ8N1K5 641 aaPredicted RBP11.48□□□□□ -0.57
CCL13-201ENST00000225844 ROCK1Q13464 1354 aa11.48□□□□□ -0.57
CCL13-201ENST00000225844 ABCC5O15440 1437 aa11.48□□□□□ -0.57
CCL13-201ENST00000225844 DAPK1P53355 1430 aa11.48□□□□□ -0.57
CCL13-201ENST00000225844 INO80Q9ULG1 1556 aaPredicted RBP11.47□□□□□ -0.57
CCL13-201ENST00000225844 ANKRD30AQ9BXX3 1397 aa11.47□□□□□ -0.57
CCL13-201ENST00000225844 WASHC2CQ9Y4E1 1318 aa11.47□□□□□ -0.57
CCL13-201ENST00000225844 TRIM26Q12899 539 aaPredicted RBP11.47□□□□□ -0.57
CCL13-201ENST00000225844 NEURL4Q96JN8 1562 aa11.46□□□□□ -0.57
CCL13-201ENST00000225844 MAST1Q9Y2H9 1570 aa11.46□□□□□ -0.57
CCL13-201ENST00000225844 NPHP4O75161 1426 aaPredicted RBP11.46□□□□□ -0.57
CCL13-201ENST00000225844 DHX29Q7Z478 1369 aaKnown RBP11.45□□□□□ -0.58
CCL13-201ENST00000225844 VWDEQ8N2E2 1590 aa11.44□□□□□ -0.58
CCL13-201ENST00000225844 FAM135AQ9P2D6 1515 aa11.44□□□□□ -0.58
CCL13-201ENST00000225844 ADGRL2O95490 1459 aa11.44□□□□□ -0.58
CCL13-201ENST00000225844 PZPP20742 1482 aa11.44□□□□□ -0.58
CCL13-201ENST00000225844 RGS17Q9UGC6 210 aaPredicted RBP11.43□□□□□ -0.58
CCL13-201ENST00000225844 UGGT1Q9NYU2 1555 aa11.42□□□□□ -0.58
CCL13-201ENST00000225844 POLR1AO95602 1720 aaPredicted RBP11.42□□□□□ -0.58
CCL13-201ENST00000225844 ALKQ9UM73 1620 aa11.42□□□□□ -0.58
CCL13-201ENST00000225844 KDM5DQ9BY66 1539 aa11.41□□□□□ -0.58
CCL13-201ENST00000225844 NLRP1Q9C000 1473 aa11.41□□□□□ -0.58
CCL13-201ENST00000225844 HRCP23327 699 aa11.41□□□□□ -0.58
CCL13-201ENST00000225844 LRRC7Q96NW7 1537 aa11.4□□□□□ -0.58
CCL13-201ENST00000225844 ADGBQ8N7X0 1667 aa11.4□□□□□ -0.58
CCL13-201ENST00000225844 MED14O60244 1454 aa11.4□□□□□ -0.58
CCL13-201ENST00000225844 DUOX2Q9NRD8 1548 aa11.39□□□□□ -0.59
CCL13-201ENST00000225844 KIF15Q9NS87 1388 aa11.39□□□□□ -0.59
CCL13-201ENST00000225844 ERBINQ96RT1 1412 aa11.38□□□□□ -0.59
CCL13-201ENST00000225844 CHIC2Q9UKJ5 165 aa11.38□□□□□ -0.59
CCL13-201ENST00000225844 CROCC2H7BZ55 1655 aa11.38□□□□□ -0.59
CCL13-201ENST00000225844 HFM1A2PYH4 1435 aa11.37□□□□□ -0.59
CCL13-201ENST00000225844 ITGAEP38570 1179 aa11.37□□□□□ -0.59
CCL13-201ENST00000225844 POTEAQ6S8J7 498 aa11.37□□□□□ -0.59
CCL13-201ENST00000225844 RRP7BPQ9NSQ0 103 aa11.37□□□□□ -0.59
CCL13-201ENST00000225844 RNF17Q9BXT8 1623 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms