RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 GAPVD1Q14C86 1478 aa18.5■□□□□ 0.55
SHPK-201ENST00000225519 FAM43AQ8N2R8 423 aa18.49■□□□□ 0.55
SHPK-201ENST00000225519 NUP155O75694 1391 aa18.46■□□□□ 0.55
SHPK-201ENST00000225519 WDR43Q15061 677 aaKnown RBP eCLIP18.45■□□□□ 0.54
SHPK-201ENST00000225519 PZPP20742 1482 aa18.45■□□□□ 0.54
SHPK-201ENST00000225519 RGL3Q3MIN7 710 aa18.44■□□□□ 0.54
SHPK-201ENST00000225519 SLKQ9H2G2 1235 aaPredicted RBP18.44■□□□□ 0.54
SHPK-201ENST00000225519 C8orf34Q49A92 452 aa18.43■□□□□ 0.54
SHPK-201ENST00000225519 KDM5CP41229 1560 aa18.43■□□□□ 0.54
SHPK-201ENST00000225519 BECN1Q14457 450 aa18.42■□□□□ 0.54
SHPK-201ENST00000225519 MBD5Q9P267 1494 aa18.41■□□□□ 0.54
SHPK-201ENST00000225519 KIF14Q15058 1648 aa18.41■□□□□ 0.54
SHPK-201ENST00000225519 RALGAPBQ86X10 1494 aa18.41■□□□□ 0.54
SHPK-201ENST00000225519 ANKRD30AQ9BXX3 1397 aa18.4■□□□□ 0.54
SHPK-201ENST00000225519 POGKQ9P215 609 aa18.4■□□□□ 0.54
SHPK-201ENST00000225519 KDM2BQ8NHM5 1336 aa18.4■□□□□ 0.54
SHPK-201ENST00000225519 PANK3Q9H999 370 aa18.4■□□□□ 0.54
SHPK-201ENST00000225519 PARD3Q8TEW0 1356 aa18.39■□□□□ 0.54
SHPK-201ENST00000225519 GLIPR1L2Q4G1C9 344 aa18.39■□□□□ 0.54
SHPK-201ENST00000225519 ADAMTS8Q9UP79 889 aa18.38■□□□□ 0.53
SHPK-201ENST00000225519 L1TD1Q5T7N2 865 aaKnown RBP18.38■□□□□ 0.53
SHPK-201ENST00000225519 NAP1L5Q96NT1 182 aaPredicted RBP18.37■□□□□ 0.53
SHPK-201ENST00000225519 DNMT1P26358 1616 aaKnown RBP18.37■□□□□ 0.53
SHPK-201ENST00000225519 CANXP27824 592 aaKnown RBP18.37■□□□□ 0.53
SHPK-201ENST00000225519 GOLGA2Q08379 1002 aa18.37■□□□□ 0.53
SHPK-201ENST00000225519 ANKRD50Q9ULJ7 1429 aa18.35■□□□□ 0.53
SHPK-201ENST00000225519 TSPY4P0CV99 314 aa18.35■□□□□ 0.53
SHPK-201ENST00000225519 TSPY10P0CW01 314 aa18.35■□□□□ 0.53
SHPK-201ENST00000225519 TRHP20396 242 aaPredicted RBP18.34■□□□□ 0.53
SHPK-201ENST00000225519 UHRF1BP1Q6BDS2 1440 aa18.34■□□□□ 0.53
SHPK-201ENST00000225519 UPF2Q9HAU5 1272 aaKnown RBP18.33■□□□□ 0.53
SHPK-201ENST00000225519 NBPF1Q3BBV0 1214 aa18.33■□□□□ 0.52
SHPK-201ENST00000225519 KIF21AQ7Z4S6 1674 aa18.32■□□□□ 0.52
SHPK-201ENST00000225519 PER1O15534 1290 aaPredicted RBP18.32■□□□□ 0.52
SHPK-201ENST00000225519 KNSTRNQ9Y448 316 aa18.31■□□□□ 0.52
SHPK-201ENST00000225519 TMF1P82094 1093 aa18.31■□□□□ 0.52
SHPK-201ENST00000225519 DUSP27Q5VZP5 1158 aa18.31■□□□□ 0.52
SHPK-201ENST00000225519 LAMC3Q9Y6N6 1575 aa18.31■□□□□ 0.52
SHPK-201ENST00000225519 GZF1Q9H116 711 aaPredicted RBP18.3■□□□□ 0.52
SHPK-201ENST00000225519 CYB5RLQ6IPT4 315 aa18.29■□□□□ 0.52
SHPK-201ENST00000225519 PNNQ9H307 717 aaKnown RBP18.29■□□□□ 0.52
SHPK-201ENST00000225519 URB2Q14146 1524 aaKnown RBP18.29■□□□□ 0.52
SHPK-201ENST00000225519 CAMSAP2Q08AD1 1489 aa18.29■□□□□ 0.52
SHPK-201ENST00000225519 WDR62O43379 1518 aa18.29■□□□□ 0.52
SHPK-201ENST00000225519 SPRYD3Q8NCJ5 442 aa18.29■□□□□ 0.52
SHPK-201ENST00000225519 RRAGDQ9NQL2 400 aaPredicted RBP18.29■□□□□ 0.52
SHPK-201ENST00000225519 IQGAP2Q13576 1575 aa18.28■□□□□ 0.52
SHPK-201ENST00000225519 CCDC146Q8IYE0 955 aa18.28■□□□□ 0.52
SHPK-201ENST00000225519 PRG4Q92954 1404 aaPredicted RBP18.27■□□□□ 0.52
SHPK-201ENST00000225519 PLEKHH2Q8IVE3 1493 aa18.27■□□□□ 0.52
SHPK-201ENST00000225519 BLMP54132 1417 aaPredicted RBP18.27■□□□□ 0.51
SHPK-201ENST00000225519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.27■□□□□ 0.511e-6■□□□□ 10.8
SHPK-201ENST00000225519 GOLGA6L3A6NEY3 463 aa18.26■□□□□ 0.51
SHPK-201ENST00000225519 OSCARQ8IYS5 282 aa18.26■□□□□ 0.51
SHPK-201ENST00000225519 BCAR3O75815 825 aa18.25■□□□□ 0.51
SHPK-201ENST00000225519 KIAA0586Q9BVV6 1533 aa18.24■□□□□ 0.51
SHPK-201ENST00000225519 PKNOX2Q96KN3 472 aa18.24■□□□□ 0.51
SHPK-201ENST00000225519 PLEKHH1Q9ULM0 1364 aa18.24■□□□□ 0.51
SHPK-201ENST00000225519 VSIG10Q8N0Z9 540 aa18.23■□□□□ 0.51
SHPK-201ENST00000225519 ZMYM4Q5VZL5 1548 aa18.23■□□□□ 0.51
SHPK-201ENST00000225519 ARHGEF12Q9NZN5 1544 aa18.23■□□□□ 0.51
SHPK-201ENST00000225519 DISP3Q9P2K9 1392 aa18.22■□□□□ 0.51
SHPK-201ENST00000225519 SEC24BO95487 1268 aa18.22■□□□□ 0.51
SHPK-201ENST00000225519 HSP90AA1P07900 732 aaKnown RBP18.22■□□□□ 0.51
SHPK-201ENST00000225519 PPP2R1AP30153 589 aa18.22■□□□□ 0.51
SHPK-201ENST00000225519 MAPK8IP3Q9UPT6 1336 aa18.22■□□□□ 0.51
SHPK-201ENST00000225519 IGHDP01880 384 aa18.21■□□□□ 0.51
SHPK-201ENST00000225519 SLFN5Q08AF3 891 aa18.21■□□□□ 0.51
SHPK-201ENST00000225519 APAF1O14727 1248 aa18.2■□□□□ 0.5
SHPK-201ENST00000225519 COG6Q9Y2V7 657 aa18.2■□□□□ 0.5
SHPK-201ENST00000225519 CCDC144AA2RUR9 1427 aa18.2■□□□□ 0.5
SHPK-201ENST00000225519 TROQ12816 1431 aaPredicted RBP18.2■□□□□ 0.5
SHPK-201ENST00000225519 NPM1P06748 294 aaKnown RBP eCLIP18.2■□□□□ 0.5
SHPK-201ENST00000225519 HSP90AA2PQ14568 343 aaPredicted RBP18.2■□□□□ 0.5
SHPK-201ENST00000225519 PLEKHD1A6NEE1 506 aa18.18■□□□□ 0.5
SHPK-201ENST00000225519 HNRNPMP52272 730 aaKnown RBP eCLIP18.18■□□□□ 0.5
SHPK-201ENST00000225519 NUP153P49790 1475 aaKnown RBP18.18■□□□□ 0.5
SHPK-201ENST00000225519 INSRP06213 1382 aa18.18■□□□□ 0.5
SHPK-201ENST00000225519 CGNL1Q0VF96 1302 aa18.18■□□□□ 0.5
SHPK-201ENST00000225519 PANK1Q8TE04 598 aa18.17■□□□□ 0.5
SHPK-201ENST00000225519 ERBINQ96RT1 1412 aa18.17■□□□□ 0.5
SHPK-201ENST00000225519 EIF3AQ14152 1382 aaKnown RBP18.17■□□□□ 0.5
SHPK-201ENST00000225519 CLUAP1Q96AJ1 413 aa18.16■□□□□ 0.5
SHPK-201ENST00000225519 TESK2Q96S53 571 aa18.16■□□□□ 0.5
SHPK-201ENST00000225519 GPATCH8Q9UKJ3 1502 aaKnown RBP18.16■□□□□ 0.5
SHPK-201ENST00000225519 C9orf84Q5VXU9 1444 aa18.16■□□□□ 0.5
SHPK-201ENST00000225519 XRCC6P12956 609 aaKnown RBP eCLIP18.16■□□□□ 0.5
SHPK-201ENST00000225519 USP19O94966 1318 aa18.15■□□□□ 0.5
SHPK-201ENST00000225519 ADGRL2O95490 1459 aa18.14■□□□□ 0.49
SHPK-201ENST00000225519 E9PSI1 815 aa18.14■□□□□ 0.49
SHPK-201ENST00000225519 PANK2Q9BZ23 570 aa18.14■□□□□ 0.49
SHPK-201ENST00000225519 PRAG1Q86YV5 1406 aa18.14■□□□□ 0.49
SHPK-201ENST00000225519 CENPJQ9HC77 1338 aaPredicted RBP18.14■□□□□ 0.49
SHPK-201ENST00000225519 NEUROD2Q15784 382 aa18.13■□□□□ 0.49
SHPK-201ENST00000225519 SPINK5Q9NQ38 1064 aaPredicted RBP18.13■□□□□ 0.49
SHPK-201ENST00000225519 E9PCH4 1651 aa18.13■□□□□ 0.49
SHPK-201ENST00000225519 ADGBQ8N7X0 1667 aa18.12■□□□□ 0.49
SHPK-201ENST00000225519 COL17A1Q9UMD9 1497 aaPredicted RBP18.12■□□□□ 0.49
SHPK-201ENST00000225519 TBC1D2Q9BYX2 928 aa18.12■□□□□ 0.49
SHPK-201ENST00000225519 MCM4P33991 863 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms