RNA–Protein interactions for RNA: ENST00000222990.7

SNX8-201, Transcript of sorting nexin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX8, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-201ENST00000222990 PRDM2Q13029 1718 aa25.12■■□□□ 1.61
SNX8-201ENST00000222990 SOX12O15370 315 aa25.11■■□□□ 1.61
SNX8-201ENST00000222990 CLUAP1Q96AJ1 413 aa25.1■■□□□ 1.61
SNX8-201ENST00000222990 SMC4Q9NTJ3 1288 aa25.1■■□□□ 1.61
SNX8-201ENST00000222990 PDE4AP27815 886 aa25.1■■□□□ 1.61
SNX8-201ENST00000222990 NUTM2DQ5VT03 806 aaPredicted RBP25.08■■□□□ 1.61
SNX8-201ENST00000222990 WDR97A6NE52 1622 aa25.08■■□□□ 1.61
SNX8-201ENST00000222990 CENPQQ7L2Z9 268 aaPredicted RBP25.08■■□□□ 1.61
SNX8-201ENST00000222990 SPRYD3Q8NCJ5 442 aa25.08■■□□□ 1.61
SNX8-201ENST00000222990 CRBNQ96SW2 442 aa25.06■■□□□ 1.6
SNX8-201ENST00000222990 NBPF8Q3BBV2 869 aa25.06■■□□□ 1.6
SNX8-201ENST00000222990 PEG3Q9GZU2 1588 aa25.06■■□□□ 1.6
SNX8-201ENST00000222990 CFAP44Q96MT7 982 aa25.06■■□□□ 1.6
SNX8-201ENST00000222990 E9PSI1 815 aa25.05■■□□□ 1.6
SNX8-201ENST00000222990 DNMBPQ6XZF7 1577 aa25.05■■□□□ 1.6
SNX8-201ENST00000222990 LMOD2Q6P5Q4 547 aa25.04■■□□□ 1.6
SNX8-201ENST00000222990 SLKQ9H2G2 1235 aaPredicted RBP25.04■■□□□ 1.6
SNX8-201ENST00000222990 RTF1Q92541 710 aaKnown RBP25.03■■□□□ 1.6
SNX8-201ENST00000222990 STAC3Q96MF2 364 aa25.03■■□□□ 1.6
SNX8-201ENST00000222990 RRP7AQ9Y3A4 280 aaKnown RBP25.03■■□□□ 1.6
SNX8-201ENST00000222990 APAF1O14727 1248 aa25.03■■□□□ 1.6
SNX8-201ENST00000222990 L1TD1Q5T7N2 865 aaKnown RBP25.02■■□□□ 1.6
SNX8-201ENST00000222990 NAIPQ13075 1403 aa25.02■■□□□ 1.6
SNX8-201ENST00000222990 CC2D2AQ9P2K1 1620 aa25.02■■□□□ 1.6
SNX8-201ENST00000222990 BRD4O60885 1362 aaPredicted RBP25.01■■□□□ 1.59
SNX8-201ENST00000222990 MAP3K1Q13233 1512 aa25■■□□□ 1.59
SNX8-201ENST00000222990 PTMAP06454 111 aaKnown RBP25■■□□□ 1.59
SNX8-201ENST00000222990 ABCA10Q8WWZ4 1543 aa25■■□□□ 1.59
SNX8-201ENST00000222990 OS9Q13438 667 aaPredicted RBP25■■□□□ 1.59
SNX8-201ENST00000222990 VGFO15240 615 aaPredicted RBP24.98■■□□□ 1.59
SNX8-201ENST00000222990 NGEFQ8N5V2 710 aa24.98■■□□□ 1.59
SNX8-201ENST00000222990 CGNL1Q0VF96 1302 aa24.98■■□□□ 1.59
SNX8-201ENST00000222990 KIAA1107Q9UPP5 1409 aa24.98■■□□□ 1.59
SNX8-201ENST00000222990 FAM161AQ3B820 660 aa24.97■■□□□ 1.59
SNX8-201ENST00000222990 TROQ12816 1431 aaPredicted RBP24.96■■□□□ 1.59
SNX8-201ENST00000222990 PCF11O94913 1555 aaKnown RBP24.95■■□□□ 1.58
SNX8-201ENST00000222990 EVC2Q86UK5 1308 aa24.95■■□□□ 1.58
SNX8-201ENST00000222990 HECW1Q76N89 1606 aa24.95■■□□□ 1.58
SNX8-201ENST00000222990 SUPT6HQ7KZ85 1726 aaKnown RBP24.94■■□□□ 1.58
SNX8-201ENST00000222990 APBB1O00213 710 aa24.94■■□□□ 1.58
SNX8-201ENST00000222990 MFAP1P55081 439 aaKnown RBP24.94■■□□□ 1.58
SNX8-201ENST00000222990 PRG4Q92954 1404 aaPredicted RBP24.94■■□□□ 1.58
SNX8-201ENST00000222990 TPRNQ4KMQ1 711 aa24.93■■□□□ 1.58
SNX8-201ENST00000222990 A0A0G2JS52 829 aa24.92■■□□□ 1.58
SNX8-201ENST00000222990 MRC2Q9UBG0 1479 aa24.92■■□□□ 1.58
SNX8-201ENST00000222990 BCL2L13Q9BXK5 485 aa24.92■■□□□ 1.58
SNX8-201ENST00000222990 MCCP23508 829 aa24.92■■□□□ 1.58
SNX8-201ENST00000222990 USP35Q9P2H5 1018 aa24.92■■□□□ 1.58
SNX8-201ENST00000222990 DAPK1P53355 1430 aa24.92■■□□□ 1.58
SNX8-201ENST00000222990 IFT140Q96RY7 1462 aa24.9■■□□□ 1.58
SNX8-201ENST00000222990 COG6Q9Y2V7 657 aa24.9■■□□□ 1.58
SNX8-201ENST00000222990 NAP1L5Q96NT1 182 aaPredicted RBP24.9■■□□□ 1.58
SNX8-201ENST00000222990 SYNJ2O15056 1496 aa24.9■■□□□ 1.58
SNX8-201ENST00000222990 C9orf84Q5VXU9 1444 aa24.89■■□□□ 1.58
SNX8-201ENST00000222990 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.89■■□□□ 1.58
SNX8-201ENST00000222990 KCNJ4P48050 445 aa24.89■■□□□ 1.57
SNX8-201ENST00000222990 GBP4Q96PP9 640 aa24.89■■□□□ 1.57
SNX8-201ENST00000222990 LMOD3Q0VAK6 560 aa24.88■■□□□ 1.57
SNX8-201ENST00000222990 EPRSP07814 1512 aaKnown RBP24.88■■□□□ 1.57
SNX8-201ENST00000222990 ZKSCAN2Q63HK3 967 aa24.87■■□□□ 1.57
SNX8-201ENST00000222990 NBPF1Q3BBV0 1214 aa24.86■■□□□ 1.57
SNX8-201ENST00000222990 CCDC184Q52MB2 194 aa24.86■■□□□ 1.57
SNX8-201ENST00000222990 BIVM-ERCC5R4GMW8 1640 aa24.85■■□□□ 1.57
SNX8-201ENST00000222990 ROCK1Q13464 1354 aa24.85■■□□□ 1.57
SNX8-201ENST00000222990 ADAMTS8Q9UP79 889 aa24.84■■□□□ 1.57
SNX8-201ENST00000222990 PNISRQ8TF01 805 aaKnown RBP24.84■■□□□ 1.57
SNX8-201ENST00000222990 DNTTIP2Q5QJE6 756 aaKnown RBP24.83■■□□□ 1.57
SNX8-201ENST00000222990 ARHGAP5Q13017 1502 aa24.82■■□□□ 1.56
SNX8-201ENST00000222990 CDK13Q14004 1512 aaKnown RBP24.82■■□□□ 1.56
SNX8-201ENST00000222990 GZF1Q9H116 711 aaPredicted RBP24.82■■□□□ 1.56
SNX8-201ENST00000222990 SLC4A3P48751 1232 aa24.82■■□□□ 1.56
SNX8-201ENST00000222990 STK31Q9BXU1 1019 aa24.82■■□□□ 1.56
SNX8-201ENST00000222990 ZRSR1Q15695 479 aaKnown RBP24.81■■□□□ 1.56
SNX8-201ENST00000222990 AFAP1Q8N556 730 aa24.81■■□□□ 1.56
SNX8-201ENST00000222990 CDCA7LQ96GN5 454 aa24.81■■□□□ 1.56
SNX8-201ENST00000222990 PTMSP20962 102 aa24.8■■□□□ 1.56
SNX8-201ENST00000222990 RUNDC1Q96C34 613 aa24.79■■□□□ 1.56
SNX8-201ENST00000222990 MINK1Q8N4C8 1332 aaPredicted RBP24.79■■□□□ 1.56
SNX8-201ENST00000222990 KIAA0586Q9BVV6 1533 aa24.79■■□□□ 1.56
SNX8-201ENST00000222990 FGD1P98174 961 aa24.79■■□□□ 1.56
SNX8-201ENST00000222990 CUL7Q14999 1698 aa24.79■■□□□ 1.56
SNX8-201ENST00000222990 HMMRO75330 724 aa24.78■■□□□ 1.56
SNX8-201ENST00000222990 PLCB2Q00722 1185 aa24.78■■□□□ 1.56
SNX8-201ENST00000222990 SNAPC4Q5SXM2 1469 aa24.78■■□□□ 1.56
SNX8-201ENST00000222990 PAK3O75914 559 aaPredicted RBP24.78■■□□□ 1.56
SNX8-201ENST00000222990 ANKRD30BQ9BXX2 1392 aa24.75■■□□□ 1.55
SNX8-201ENST00000222990 PPP2R1AP30153 589 aa24.75■■□□□ 1.55
SNX8-201ENST00000222990 CHMP4AQ9BY43 222 aa24.75■■□□□ 1.55
SNX8-201ENST00000222990 ELL2O00472 640 aaPredicted RBP24.74■■□□□ 1.55
SNX8-201ENST00000222990 AKNAQ7Z591 1439 aa24.74■■□□□ 1.55
SNX8-201ENST00000222990 CFAP70Q5T0N1 1121 aa24.74■■□□□ 1.55
SNX8-201ENST00000222990 IQGAP2Q13576 1575 aa24.74■■□□□ 1.55
SNX8-201ENST00000222990 KIAA1211Q6ZU35 1233 aa24.73■■□□□ 1.55
SNX8-201ENST00000222990 PTPN23Q9H3S7 1636 aa24.72■■□□□ 1.55
SNX8-201ENST00000222990 DIAPH1O60610 1272 aaKnown RBP24.72■■□□□ 1.55
SNX8-201ENST00000222990 SLC4A10Q6U841 1118 aa24.72■■□□□ 1.55
SNX8-201ENST00000222990 NGDNQ8NEJ9 315 aaKnown RBP24.72■■□□□ 1.55
SNX8-201ENST00000222990 UNC13AQ9UPW8 1703 aa24.72■■□□□ 1.55
SNX8-201ENST00000222990 DZIP1LQ8IYY4 767 aaKnown RBP24.71■■□□□ 1.55
SNX8-201ENST00000222990 DDX19BQ9UMR2 479 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms