RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 PNISRQ8TF01 805 aaKnown RBP19.79■□□□□ 0.76
UBE2D4-201ENST00000222402 KIF3BO15066 747 aa19.79■□□□□ 0.76
UBE2D4-201ENST00000222402 CANXP27824 592 aaKnown RBP19.79■□□□□ 0.76
UBE2D4-201ENST00000222402 TEX14Q8IWB6 1497 aa19.79■□□□□ 0.76
UBE2D4-201ENST00000222402 ZBTB47Q9UFB7 747 aaPredicted RBP19.77■□□□□ 0.76
UBE2D4-201ENST00000222402 DENND4BO75064 1496 aaPredicted RBP19.76■□□□□ 0.75
UBE2D4-201ENST00000222402 KANK1Q14678 1352 aa19.76■□□□□ 0.75
UBE2D4-201ENST00000222402 ITSN2Q9NZM3 1697 aa19.75■□□□□ 0.75
UBE2D4-201ENST00000222402 CCDC141Q6ZP82 1450 aa19.75■□□□□ 0.75
UBE2D4-201ENST00000222402 AFAP1Q8N556 730 aa19.74■□□□□ 0.75
UBE2D4-201ENST00000222402 CEP170Q5SW79 1584 aa19.72■□□□□ 0.75
UBE2D4-201ENST00000222402 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.71■□□□□ 0.75
UBE2D4-201ENST00000222402 BRD4O60885 1362 aaPredicted RBP19.71■□□□□ 0.75
UBE2D4-201ENST00000222402 NUP160Q12769 1436 aa19.7■□□□□ 0.74
UBE2D4-201ENST00000222402 TNNT2P45379 298 aaPredicted RBP19.68■□□□□ 0.74
UBE2D4-201ENST00000222402 EXOC6Q8TAG9 804 aa19.68■□□□□ 0.74
UBE2D4-201ENST00000222402 KDM5BQ9UGL1 1544 aa19.68■□□□□ 0.74
UBE2D4-201ENST00000222402 NOP58Q9Y2X3 529 aaKnown RBP19.68■□□□□ 0.74
UBE2D4-201ENST00000222402 PDE3BQ13370 1112 aa19.68■□□□□ 0.74
UBE2D4-201ENST00000222402 RRP1P56182 461 aaKnown RBP19.68■□□□□ 0.74
UBE2D4-201ENST00000222402 FANCIQ9NVI1 1328 aa19.67■□□□□ 0.74
UBE2D4-201ENST00000222402 GGT6Q6P531 493 aa19.67■□□□□ 0.74
UBE2D4-201ENST00000222402 SPATA31E1Q6ZUB1 1445 aa19.66■□□□□ 0.74
UBE2D4-201ENST00000222402 SMG6Q86US8 1419 aaKnown RBP19.66■□□□□ 0.74
UBE2D4-201ENST00000222402 PLIN1O60240 522 aa19.66■□□□□ 0.74
UBE2D4-201ENST00000222402 ADGRL2O95490 1459 aa19.66■□□□□ 0.74
UBE2D4-201ENST00000222402 NEUROD2Q15784 382 aa19.65■□□□□ 0.74
UBE2D4-201ENST00000222402 CDCA7LQ96GN5 454 aa19.64■□□□□ 0.73
UBE2D4-201ENST00000222402 DHX29Q7Z478 1369 aaKnown RBP19.64■□□□□ 0.73
UBE2D4-201ENST00000222402 RALGAPBQ86X10 1494 aa19.62■□□□□ 0.73
UBE2D4-201ENST00000222402 PLEKHH2Q8IVE3 1493 aa19.62■□□□□ 0.73
UBE2D4-201ENST00000222402 CCDC146Q8IYE0 955 aa19.6■□□□□ 0.73
UBE2D4-201ENST00000222402 SHANK2Q9UPX8 1470 aa19.58■□□□□ 0.73
UBE2D4-201ENST00000222402 STAG3Q9UJ98 1225 aa19.58■□□□□ 0.72
UBE2D4-201ENST00000222402 EIF3AQ14152 1382 aaKnown RBP19.57■□□□□ 0.72
UBE2D4-201ENST00000222402 SLC24A1O60721 1099 aa19.57■□□□□ 0.72
UBE2D4-201ENST00000222402 SYCP2Q9BX26 1530 aa19.56■□□□□ 0.72
UBE2D4-201ENST00000222402 ADAMTS8Q9UP79 889 aa19.56■□□□□ 0.72
UBE2D4-201ENST00000222402 MSH5O43196 834 aa19.56■□□□□ 0.72
UBE2D4-201ENST00000222402 ERBINQ96RT1 1412 aa19.55■□□□□ 0.72
UBE2D4-201ENST00000222402 FAM135AQ9P2D6 1515 aa19.55■□□□□ 0.72
UBE2D4-201ENST00000222402 GOLGA2Q08379 1002 aa19.55■□□□□ 0.72
UBE2D4-201ENST00000222402 ABCC10Q5T3U5 1492 aa19.54■□□□□ 0.72
UBE2D4-201ENST00000222402 SAFB2Q14151 953 aaKnown RBP eCLIP19.54■□□□□ 0.72
UBE2D4-201ENST00000222402 RGS3P49796 1198 aa19.54■□□□□ 0.72
UBE2D4-201ENST00000222402 TRAK1Q9UPV9 953 aa19.54■□□□□ 0.72
UBE2D4-201ENST00000222402 ADGBQ8N7X0 1667 aa19.54■□□□□ 0.72
UBE2D4-201ENST00000222402 TCERG1O14776 1098 aaKnown RBP19.53■□□□□ 0.72
UBE2D4-201ENST00000222402 MORC1Q86VD1 984 aa19.53■□□□□ 0.72
UBE2D4-201ENST00000222402 UHRF1BP1Q6BDS2 1440 aa19.53■□□□□ 0.72
UBE2D4-201ENST00000222402 WASHC2CQ9Y4E1 1318 aa19.53■□□□□ 0.72
UBE2D4-201ENST00000222402 CFAP70Q5T0N1 1121 aa19.52■□□□□ 0.72
UBE2D4-201ENST00000222402 NUTM2DQ5VT03 806 aaPredicted RBP19.52■□□□□ 0.72
UBE2D4-201ENST00000222402 CRBNQ96SW2 442 aa19.52■□□□□ 0.72
UBE2D4-201ENST00000222402 PRAG1Q86YV5 1406 aa19.51■□□□□ 0.71
UBE2D4-201ENST00000222402 DISP3Q9P2K9 1392 aa19.51■□□□□ 0.71
UBE2D4-201ENST00000222402 ARHGEF12Q9NZN5 1544 aa19.5■□□□□ 0.71
UBE2D4-201ENST00000222402 ABCA8O94911 1581 aa19.5■□□□□ 0.71
UBE2D4-201ENST00000222402 FRAT1Q92837 279 aaPredicted RBP19.5■□□□□ 0.71
UBE2D4-201ENST00000222402 CFAP53Q96M91 514 aa19.5■□□□□ 0.71
UBE2D4-201ENST00000222402 IPO9Q96P70 1041 aaKnown RBP19.5■□□□□ 0.71
UBE2D4-201ENST00000222402 LAS1LQ9Y4W2 734 aaKnown RBP19.5■□□□□ 0.71
UBE2D4-201ENST00000222402 SCAPERQ9BY12 1400 aa19.49■□□□□ 0.71
UBE2D4-201ENST00000222402 PPP2R1AP30153 589 aa19.49■□□□□ 0.71
UBE2D4-201ENST00000222402 APAF1O14727 1248 aa19.48■□□□□ 0.71
UBE2D4-201ENST00000222402 MBD5Q9P267 1494 aa19.47■□□□□ 0.71
UBE2D4-201ENST00000222402 STAC3Q96MF2 364 aa19.46■□□□□ 0.71
UBE2D4-201ENST00000222402 NEFMP07197 916 aa19.45■□□□□ 0.7
UBE2D4-201ENST00000222402 TESK2Q96S53 571 aa19.45■□□□□ 0.7
UBE2D4-201ENST00000222402 STK26Q9P289 416 aa19.45■□□□□ 0.7
UBE2D4-201ENST00000222402 PDE4AP27815 886 aa19.45■□□□□ 0.7
UBE2D4-201ENST00000222402 PLCH2O75038 1416 aa19.42■□□□□ 0.7
UBE2D4-201ENST00000222402 PER1O15534 1290 aaPredicted RBP19.42■□□□□ 0.7
UBE2D4-201ENST00000222402 DDRGK1Q96HY6 314 aa19.41■□□□□ 0.7
UBE2D4-201ENST00000222402 TRAPPC8Q9Y2L5 1435 aa19.41■□□□□ 0.7
UBE2D4-201ENST00000222402 KDM5CP41229 1560 aa19.4■□□□□ 0.7
UBE2D4-201ENST00000222402 CDC42BPAQ5VT25 1732 aa19.4■□□□□ 0.7
UBE2D4-201ENST00000222402 SRPK2P78362 688 aaKnown RBP19.4■□□□□ 0.7
UBE2D4-201ENST00000222402 U2SURPO15042 1029 aaKnown RBP19.4■□□□□ 0.7
UBE2D4-201ENST00000222402 BCL11AQ9H165 835 aa19.4■□□□□ 0.7
UBE2D4-201ENST00000222402 POGKQ9P215 609 aa19.4■□□□□ 0.7
UBE2D4-201ENST00000222402 RRP7AQ9Y3A4 280 aaKnown RBP19.4■□□□□ 0.7
UBE2D4-201ENST00000222402 PARD3Q8TEW0 1356 aa19.4■□□□□ 0.7
UBE2D4-201ENST00000222402 A2MP01023 1474 aa19.4■□□□□ 0.7
UBE2D4-201ENST00000222402 DEKP35659 375 aaKnown RBP19.4■□□□□ 0.7
UBE2D4-201ENST00000222402 TMEM132EQ6IEE7 984 aa19.39■□□□□ 0.69
UBE2D4-201ENST00000222402 DUOX2Q9NRD8 1548 aa19.38■□□□□ 0.69
UBE2D4-201ENST00000222402 CENPJQ9HC77 1338 aaPredicted RBP19.38■□□□□ 0.69
UBE2D4-201ENST00000222402 PAK3O75914 559 aaPredicted RBP19.38■□□□□ 0.69
UBE2D4-201ENST00000222402 ADCY10Q96PN6 1610 aa19.37■□□□□ 0.69
UBE2D4-201ENST00000222402 ARHGEF5Q12774 1597 aa19.37■□□□□ 0.69
UBE2D4-201ENST00000222402 PPM1GO15355 546 aaPredicted RBP19.37■□□□□ 0.69
UBE2D4-201ENST00000222402 SAMD9LQ8IVG5 1584 aa19.37■□□□□ 0.69
UBE2D4-201ENST00000222402 BCORL1Q5H9F3 1711 aa19.37■□□□□ 0.69
UBE2D4-201ENST00000222402 U2AF1L5P0DN76 240 aaPredicted RBP19.36■□□□□ 0.69
UBE2D4-201ENST00000222402 U2AF1Q01081 240 aaKnown RBP eCLIP19.36■□□□□ 0.69
UBE2D4-201ENST00000222402 ESF1Q9H501 851 aaKnown RBP19.35■□□□□ 0.69
UBE2D4-201ENST00000222402 LRPPRCP42704 1394 aaKnown RBP19.35■□□□□ 0.69
UBE2D4-201ENST00000222402 ABCC2Q92887 1545 aa19.34■□□□□ 0.69
UBE2D4-201ENST00000222402 UPF2Q9HAU5 1272 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms