RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 MAGI3Q5TCQ9 1506 aa13.91□□□□□ -0.18
VPS18-201ENST00000220509 KIF15Q9NS87 1388 aa13.9□□□□□ -0.18
VPS18-201ENST00000220509 SAMD9Q5K651 1589 aa13.9□□□□□ -0.18
VPS18-201ENST00000220509 DAPK1P53355 1430 aa13.9□□□□□ -0.18
VPS18-201ENST00000220509 MLECQ14165 292 aa13.9□□□□□ -0.18
VPS18-201ENST00000220509 CC2D1BQ5T0F9 858 aaKnown RBP13.9□□□□□ -0.18
VPS18-201ENST00000220509 ESF1Q9H501 851 aaKnown RBP13.9□□□□□ -0.18
VPS18-201ENST00000220509 ATP10BO94823 1461 aa13.9□□□□□ -0.18
VPS18-201ENST00000220509 MIA2Q96PC5 1412 aa13.89□□□□□ -0.19
VPS18-201ENST00000220509 BBXQ8WY36 941 aaPredicted RBP13.89□□□□□ -0.19
VPS18-201ENST00000220509 CCDC184Q52MB2 194 aa13.89□□□□□ -0.19
VPS18-201ENST00000220509 ABCC5O15440 1437 aa13.88□□□□□ -0.19
VPS18-201ENST00000220509 NUP160Q12769 1436 aa13.88□□□□□ -0.19
VPS18-201ENST00000220509 ANKRD50Q9ULJ7 1429 aa13.88□□□□□ -0.19
VPS18-201ENST00000220509 RAPGEF6Q8TEU7 1601 aa13.87□□□□□ -0.19
VPS18-201ENST00000220509 HSP90AA2PQ14568 343 aaPredicted RBP13.87□□□□□ -0.19
VPS18-201ENST00000220509 CFAP43Q8NDM7 1665 aa13.86□□□□□ -0.19
VPS18-201ENST00000220509 ARHGAP5Q13017 1502 aa13.86□□□□□ -0.19
VPS18-201ENST00000220509 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.85□□□□□ -0.19
VPS18-201ENST00000220509 SAMD1Q6SPF0 538 aaPredicted RBP13.85□□□□□ -0.19
VPS18-201ENST00000220509 KNSTRNQ9Y448 316 aa13.85□□□□□ -0.19
VPS18-201ENST00000220509 RSPH4AQ5TD94 716 aa13.85□□□□□ -0.19
VPS18-201ENST00000220509 IPO9Q96P70 1041 aaKnown RBP13.84□□□□□ -0.19
VPS18-201ENST00000220509 NUTM2DQ5VT03 806 aaPredicted RBP13.84□□□□□ -0.19
VPS18-201ENST00000220509 GPATCH8Q9UKJ3 1502 aaKnown RBP13.83□□□□□ -0.19
VPS18-201ENST00000220509 CAMSAP2Q08AD1 1489 aa13.83□□□□□ -0.19
VPS18-201ENST00000220509 C9orf84Q5VXU9 1444 aa13.83□□□□□ -0.2
VPS18-201ENST00000220509 NBPF8Q3BBV2 869 aa13.82□□□□□ -0.2
VPS18-201ENST00000220509 ROCK2O75116 1388 aaKnown RBP13.81□□□□□ -0.2
VPS18-201ENST00000220509 ST20-MTHFSA0A0A6YYL1 179 aa13.8□□□□□ -0.2
VPS18-201ENST00000220509 MAPKBP1O60336 1514 aa13.8□□□□□ -0.2
VPS18-201ENST00000220509 TNNT2P45379 298 aaPredicted RBP13.8□□□□□ -0.2
VPS18-201ENST00000220509 ARID4BQ4LE39 1312 aaPredicted RBP13.8□□□□□ -0.2
VPS18-201ENST00000220509 TMF1P82094 1093 aa13.79□□□□□ -0.2
VPS18-201ENST00000220509 RAPGEF3O95398 923 aa13.79□□□□□ -0.2
VPS18-201ENST00000220509 NCOA1Q15788 1441 aa13.78□□□□□ -0.2
VPS18-201ENST00000220509 FAM69CQ0P6D2 419 aa13.78□□□□□ -0.2
VPS18-201ENST00000220509 TRHP20396 242 aaPredicted RBP13.78□□□□□ -0.2
VPS18-201ENST00000220509 SLC4A3P48751 1232 aa13.77□□□□□ -0.21
VPS18-201ENST00000220509 CDCA8Q53HL2 280 aa13.77□□□□□ -0.21
VPS18-201ENST00000220509 NEUROD2Q15784 382 aa13.76□□□□□ -0.21
VPS18-201ENST00000220509 BRPF3Q9ULD4 1205 aa13.76□□□□□ -0.21
VPS18-201ENST00000220509 SCAPERQ9BY12 1400 aa13.76□□□□□ -0.21
VPS18-201ENST00000220509 PRKRIP1Q9H875 184 aaPredicted RBP13.76□□□□□ -0.21
VPS18-201ENST00000220509 ERCC6L2Q5T890 1561 aa13.75□□□□□ -0.21
VPS18-201ENST00000220509 KIF14Q15058 1648 aa13.74□□□□□ -0.21
VPS18-201ENST00000220509 SAFB2Q14151 953 aaKnown RBP eCLIP13.74□□□□□ -0.21
VPS18-201ENST00000220509 CDK11BP21127 795 aaKnown RBP13.74□□□□□ -0.21
VPS18-201ENST00000220509 AKNAQ7Z591 1439 aa13.74□□□□□ -0.21
VPS18-201ENST00000220509 WASHC2AQ641Q2 1341 aa13.73□□□□□ -0.21
VPS18-201ENST00000220509 WASHC2CQ9Y4E1 1318 aa13.73□□□□□ -0.21
VPS18-201ENST00000220509 CCDC144AA2RUR9 1427 aa13.73□□□□□ -0.21
VPS18-201ENST00000220509 KANK1Q14678 1352 aa13.73□□□□□ -0.21
VPS18-201ENST00000220509 USP47Q96K76 1375 aa13.72□□□□□ -0.21
VPS18-201ENST00000220509 CHD1O14646 1710 aa13.71□□□□□ -0.21
VPS18-201ENST00000220509 ROCK1Q13464 1354 aa13.71□□□□□ -0.21
VPS18-201ENST00000220509 USP35Q9P2H5 1018 aa13.71□□□□□ -0.22
VPS18-201ENST00000220509 NBPF1Q3BBV0 1214 aa13.7□□□□□ -0.22
VPS18-201ENST00000220509 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.7□□□□□ -0.22
VPS18-201ENST00000220509 HSP90AA1P07900 732 aaKnown RBP13.7□□□□□ -0.22
VPS18-201ENST00000220509 ANKRD30BQ9BXX2 1392 aa13.7□□□□□ -0.22
VPS18-201ENST00000220509 ZFP91Q96JP5 570 aaPredicted RBP13.69□□□□□ -0.22
VPS18-201ENST00000220509 KIF7Q2M1P5 1343 aa13.69□□□□□ -0.22
VPS18-201ENST00000220509 PPM1GO15355 546 aaPredicted RBP13.69□□□□□ -0.22
VPS18-201ENST00000220509 PLCD3Q8N3E9 789 aa13.69□□□□□ -0.22
VPS18-201ENST00000220509 C11orf95C9JLR9 678 aaPredicted RBP13.68□□□□□ -0.22
VPS18-201ENST00000220509 LRRIQ1Q96JM4 1722 aa13.68□□□□□ -0.22
VPS18-201ENST00000220509 KTN1Q86UP2 1357 aaKnown RBP13.67□□□□□ -0.22
VPS18-201ENST00000220509 RGS3P49796 1198 aa13.67□□□□□ -0.22
VPS18-201ENST00000220509 KIAA1107Q9UPP5 1409 aa13.67□□□□□ -0.22
VPS18-201ENST00000220509 SKAP1Q86WV1 359 aa13.67□□□□□ -0.22
VPS18-201ENST00000220509 STK26Q9P289 416 aa13.67□□□□□ -0.22
VPS18-201ENST00000220509 CCDC141Q6ZP82 1450 aa13.67□□□□□ -0.22
VPS18-201ENST00000220509 AMER1Q5JTC6 1135 aaPredicted RBP13.67□□□□□ -0.22
VPS18-201ENST00000220509 TCOF1Q13428 1488 aaKnown RBP13.67□□□□□ -0.22
VPS18-201ENST00000220509 TPRNQ4KMQ1 711 aa13.66□□□□□ -0.22
VPS18-201ENST00000220509 CCDC7Q96M83 1385 aa13.66□□□□□ -0.22
VPS18-201ENST00000220509 POGKQ9P215 609 aa13.66□□□□□ -0.22
VPS18-201ENST00000220509 PLEKHH2Q8IVE3 1493 aa13.66□□□□□ -0.22
VPS18-201ENST00000220509 TAOK2Q9UL54 1235 aa13.65□□□□□ -0.22
VPS18-201ENST00000220509 EXOC6Q8TAG9 804 aa13.65□□□□□ -0.22
VPS18-201ENST00000220509 KDM6BO15054 1643 aa13.65□□□□□ -0.22
VPS18-201ENST00000220509 RALBP1Q15311 655 aa13.64□□□□□ -0.23
VPS18-201ENST00000220509 SYCP2Q9BX26 1530 aa13.64□□□□□ -0.23
VPS18-201ENST00000220509 ZBED9Q6R2W3 1325 aa13.64□□□□□ -0.23
VPS18-201ENST00000220509 NUDCQ9Y266 331 aa13.64□□□□□ -0.23
VPS18-201ENST00000220509 PDE4AP27815 886 aa13.63□□□□□ -0.23
VPS18-201ENST00000220509 PANK3Q9H999 370 aa13.63□□□□□ -0.23
VPS18-201ENST00000220509 TRAPPC8Q9Y2L5 1435 aa13.63□□□□□ -0.23
VPS18-201ENST00000220509 RRP9O43818 475 aaKnown RBP13.63□□□□□ -0.23
VPS18-201ENST00000220509 IPO4Q8TEX9 1081 aaKnown RBP13.62□□□□□ -0.23
VPS18-201ENST00000220509 CFAP53Q96M91 514 aa13.62□□□□□ -0.23
VPS18-201ENST00000220509 ASXL2Q76L83 1435 aa13.62□□□□□ -0.23
VPS18-201ENST00000220509 PLIN1O60240 522 aa13.62□□□□□ -0.23
VPS18-201ENST00000220509 NLRP13Q86W25 1043 aa13.62□□□□□ -0.23
VPS18-201ENST00000220509 TRAK1Q9UPV9 953 aa13.62□□□□□ -0.23
VPS18-201ENST00000220509 CD109Q6YHK3 1445 aa13.61□□□□□ -0.23
VPS18-201ENST00000220509 SRPK2P78362 688 aaKnown RBP13.61□□□□□ -0.23
VPS18-201ENST00000220509 ABCA8O94911 1581 aa13.61□□□□□ -0.23
VPS18-201ENST00000220509 ABCC2Q92887 1545 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms