RNA–Protein interactions for RNA: ENST00000217398.3

PXMP4-201, Transcript of peroxisomal membrane protein 4, humanhuman

TSL 2 BASIC

Gene PXMP4, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP4-201ENST00000217398 KDM5DQ9BY66 1539 aa28.96■■■□□ 2.23
PXMP4-201ENST00000217398 KIF3BO15066 747 aa28.96■■■□□ 2.23
PXMP4-201ENST00000217398 MIA2Q96PC5 1412 aa28.94■■■□□ 2.22
PXMP4-201ENST00000217398 MYOM3Q5VTT5 1437 aa28.94■■■□□ 2.22
PXMP4-201ENST00000217398 DNMT1P26358 1616 aaKnown RBP28.93■■■□□ 2.22
PXMP4-201ENST00000217398 A2ML1A8K2U0 1454 aa28.92■■■□□ 2.22
PXMP4-201ENST00000217398 PZPP20742 1482 aa28.92■■■□□ 2.22
PXMP4-201ENST00000217398 RNF17Q9BXT8 1623 aaKnown RBP28.92■■■□□ 2.22
PXMP4-201ENST00000217398 NCKAP5LQ9HCH0 1330 aa28.92■■■□□ 2.22
PXMP4-201ENST00000217398 TSPY4P0CV99 314 aa28.9■■■□□ 2.22
PXMP4-201ENST00000217398 TSPY10P0CW01 314 aa28.9■■■□□ 2.22
PXMP4-201ENST00000217398 FBXO31Q5XUX0 539 aaPredicted RBP28.88■■■□□ 2.21
PXMP4-201ENST00000217398 IQSEC2Q5JU85 1478 aa28.87■■■□□ 2.21
PXMP4-201ENST00000217398 EIF2AK4Q9P2K8 1649 aaKnown RBP28.87■■■□□ 2.21
PXMP4-201ENST00000217398 PKD2Q13563 968 aa28.86■■■□□ 2.21
PXMP4-201ENST00000217398 MROH1Q8NDA8 1641 aa28.86■■■□□ 2.21
PXMP4-201ENST00000217398 TNRQ92752 1358 aa28.85■■■□□ 2.21
PXMP4-201ENST00000217398 WASHC2CQ9Y4E1 1318 aa28.83■■■□□ 2.21
PXMP4-201ENST00000217398 ZC3H13Q5T200 1668 aaKnown RBP28.82■■■□□ 2.2
PXMP4-201ENST00000217398 CROCC2H7BZ55 1655 aa28.81■■■□□ 2.2
PXMP4-201ENST00000217398 ABCC3O15438 1527 aa28.81■■■□□ 2.2
PXMP4-201ENST00000217398 POLR1AO95602 1720 aaPredicted RBP28.8■■■□□ 2.2
PXMP4-201ENST00000217398 NEURL4Q96JN8 1562 aa28.8■■■□□ 2.2
PXMP4-201ENST00000217398 ZNF335Q9H4Z2 1342 aaPredicted RBP28.79■■■□□ 2.2
PXMP4-201ENST00000217398 PTPN23Q9H3S7 1636 aa28.78■■■□□ 2.2
PXMP4-201ENST00000217398 DUOX2Q9NRD8 1548 aa28.76■■■□□ 2.19
PXMP4-201ENST00000217398 SHANK2Q9UPX8 1470 aa28.76■■■□□ 2.19
PXMP4-201ENST00000217398 ABCC5O15440 1437 aa28.76■■■□□ 2.19
PXMP4-201ENST00000217398 SPATA31D1Q6ZQQ2 1576 aa28.75■■■□□ 2.19
PXMP4-201ENST00000217398 NLRP1Q9C000 1473 aa28.75■■■□□ 2.19
PXMP4-201ENST00000217398 CEP152O94986 1710 aa28.74■■■□□ 2.19
PXMP4-201ENST00000217398 UGGT1Q9NYU2 1555 aa28.69■■■□□ 2.18
PXMP4-201ENST00000217398 FGD6Q6ZV73 1430 aa28.69■■■□□ 2.18
PXMP4-201ENST00000217398 ERVK-7P63135 1459 aa28.68■■■□□ 2.18
PXMP4-201ENST00000217398 PRDM15P57071 1507 aaPredicted RBP28.68■■■□□ 2.18
PXMP4-201ENST00000217398 DAPK1P53355 1430 aa28.68■■■□□ 2.18
PXMP4-201ENST00000217398 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.67■■■□□ 2.18
PXMP4-201ENST00000217398 DEPDC5O75140 1603 aa28.67■■■□□ 2.18
PXMP4-201ENST00000217398 KIF15Q9NS87 1388 aa28.66■■■□□ 2.18
PXMP4-201ENST00000217398 CFAP65Q6ZU64 1925 aaKnown RBP28.65■■■□□ 2.18
PXMP4-201ENST00000217398 ERBINQ96RT1 1412 aa28.65■■■□□ 2.18
PXMP4-201ENST00000217398 MED14O60244 1454 aa28.65■■■□□ 2.18
PXMP4-201ENST00000217398 APLP2Q06481 763 aa28.62■■■□□ 2.17
PXMP4-201ENST00000217398 THEMISQ8N1K5 641 aaPredicted RBP28.62■■■□□ 2.17
PXMP4-201ENST00000217398 VWDEQ8N2E2 1590 aa28.61■■■□□ 2.17
PXMP4-201ENST00000217398 ARHGAP31Q2M1Z3 1444 aa28.6■■■□□ 2.17
PXMP4-201ENST00000217398 UBR1Q8IWV7 1749 aa28.6■■■□□ 2.17
PXMP4-201ENST00000217398 ANKLE2Q86XL3 938 aa28.59■■■□□ 2.17
PXMP4-201ENST00000217398 RRP7BPQ9NSQ0 103 aa28.58■■■□□ 2.17
PXMP4-201ENST00000217398 NPHP4O75161 1426 aaPredicted RBP28.56■■■□□ 2.16
PXMP4-201ENST00000217398 CPS1P31327 1500 aa28.56■■■□□ 2.16
PXMP4-201ENST00000217398 IQGAP1P46940 1657 aa28.55■■■□□ 2.16
PXMP4-201ENST00000217398 STRCP1A6NGW2 1772 aa28.52■■■□□ 2.16
PXMP4-201ENST00000217398 UBAP1LF5GYI3 381 aa28.51■■■□□ 2.15
PXMP4-201ENST00000217398 LMTK2Q8IWU2 1503 aa28.51■■■□□ 2.15
PXMP4-201ENST00000217398 ADGRL2O95490 1459 aa28.51■■■□□ 2.15
PXMP4-201ENST00000217398 ARHGAP23Q9P227 1491 aa28.49■■■□□ 2.15
PXMP4-201ENST00000217398 ANKRD30AQ9BXX3 1397 aa28.49■■■□□ 2.15
PXMP4-201ENST00000217398 SLIT1O75093 1534 aa28.47■■■□□ 2.15
PXMP4-201ENST00000217398 CHIC2Q9UKJ5 165 aa28.46■■■□□ 2.15
PXMP4-201ENST00000217398 PIK3C2BO00750 1634 aa28.45■■■□□ 2.14
PXMP4-201ENST00000217398 ALKQ9UM73 1620 aa28.45■■■□□ 2.14
PXMP4-201ENST00000217398 DISP3Q9P2K9 1392 aa28.44■■■□□ 2.14
PXMP4-201ENST00000217398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.43■■■□□ 2.14
PXMP4-201ENST00000217398 KDM5AP29375 1690 aaKnown RBP28.42■■■□□ 2.14
PXMP4-201ENST00000217398 SCAF11Q99590 1463 aaKnown RBP28.41■■■□□ 2.14
PXMP4-201ENST00000217398 SYNMO15061 1565 aa28.41■■■□□ 2.14
PXMP4-201ENST00000217398 KANK1Q14678 1352 aa28.4■■■□□ 2.14
PXMP4-201ENST00000217398 EFCAB6Q5THR3 1501 aa28.4■■■□□ 2.14
PXMP4-201ENST00000217398 LTKP29376 864 aa28.39■■■□□ 2.14
PXMP4-201ENST00000217398 ILDR2Q71H61 639 aa28.39■■■□□ 2.14
PXMP4-201ENST00000217398 NOS1P29475 1434 aa28.37■■■□□ 2.13
PXMP4-201ENST00000217398 LRRC7Q96NW7 1537 aa28.37■■■□□ 2.13
PXMP4-201ENST00000217398 FAM50AQ14320 339 aaKnown RBP28.33■■■□□ 2.13
PXMP4-201ENST00000217398 TMEM2Q9UHN6 1383 aa28.32■■■□□ 2.12
PXMP4-201ENST00000217398 ANKRD50Q9ULJ7 1429 aa28.32■■■□□ 2.12
PXMP4-201ENST00000217398 IDI1Q13907 227 aa28.31■■■□□ 2.12
PXMP4-201ENST00000217398 TXNDC2Q86VQ3 553 aa28.31■■■□□ 2.12
PXMP4-201ENST00000217398 XIRP1Q702N8 1843 aaKnown RBP28.3■■■□□ 2.12
PXMP4-201ENST00000217398 TOM1O60784 492 aa28.3■■■□□ 2.12
PXMP4-201ENST00000217398 UNC13BO14795 1591 aa28.28■■■□□ 2.12
PXMP4-201ENST00000217398 TET3O43151 1660 aa28.27■■■□□ 2.12
PXMP4-201ENST00000217398 HSPA1LP34931 641 aa28.27■■■□□ 2.12
PXMP4-201ENST00000217398 ADGRB3O60242 1522 aa28.27■■■□□ 2.12
PXMP4-201ENST00000217398 RPRD2Q5VT52 1461 aaKnown RBP28.26■■■□□ 2.11
PXMP4-201ENST00000217398 PIP4K2BP78356 416 aa28.25■■■□□ 2.11
PXMP4-201ENST00000217398 GCC2Q8IWJ2 1684 aa28.23■■■□□ 2.11
PXMP4-201ENST00000217398 EID1Q9Y6B2 187 aa28.22■■■□□ 2.11
PXMP4-201ENST00000217398 MYO5BQ9ULV0 1848 aa28.21■■■□□ 2.11
PXMP4-201ENST00000217398 ROCK1Q13464 1354 aa28.21■■■□□ 2.11
PXMP4-201ENST00000217398 SCAF1Q9H7N4 1312 aaKnown RBP28.19■■■□□ 2.1
PXMP4-201ENST00000217398 SLC52A1Q9NWF4 448 aa28.19■■■□□ 2.1
PXMP4-201ENST00000217398 STAG3Q9UJ98 1225 aa28.17■■■□□ 2.1
PXMP4-201ENST00000217398 E9PCH4 1651 aa28.16■■■□□ 2.1
PXMP4-201ENST00000217398 TMEM131LA2VDJ0 1609 aa28.15■■■□□ 2.1
PXMP4-201ENST00000217398 IQGAP3Q86VI3 1631 aa28.15■■■□□ 2.1
PXMP4-201ENST00000217398 MED1Q15648 1581 aaPredicted RBP28.15■■■□□ 2.1
PXMP4-201ENST00000217398 SOCS7O14512 581 aa28.14■■■□□ 2.1
PXMP4-201ENST00000217398 ZFYVE9O95405 1425 aa28.14■■■□□ 2.1
PXMP4-201ENST00000217398 NWD1Q149M9 1564 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms