RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 HSPA5P11021 654 aaKnown RBP24.52■■□□□ 1.52
VRK1-201ENST00000216639 EIF2AK4Q9P2K8 1649 aaKnown RBP24.5■■□□□ 1.51
VRK1-201ENST00000216639 NEO1Q92859 1461 aa24.49■■□□□ 1.51
VRK1-201ENST00000216639 DEPDC5O75140 1603 aa24.48■■□□□ 1.51
VRK1-201ENST00000216639 DHX29Q7Z478 1369 aaKnown RBP24.48■■□□□ 1.51
VRK1-201ENST00000216639 UHRF1BP1Q6BDS2 1440 aa24.48■■□□□ 1.51
VRK1-201ENST00000216639 ATP10AO60312 1499 aa24.47■■□□□ 1.51
VRK1-201ENST00000216639 POGZQ7Z3K3 1410 aa24.47■■□□□ 1.51
VRK1-201ENST00000216639 KANK1Q14678 1352 aa24.47■■□□□ 1.51
VRK1-201ENST00000216639 KIDINS220Q9ULH0 1771 aa24.45■■□□□ 1.5
VRK1-201ENST00000216639 KDM5CP41229 1560 aa24.45■■□□□ 1.5
VRK1-201ENST00000216639 PLA2R1Q13018 1463 aa24.44■■□□□ 1.5
VRK1-201ENST00000216639 GLI2P10070 1586 aa24.42■■□□□ 1.5
VRK1-201ENST00000216639 ZNF326Q5BKZ1 582 aaKnown RBP24.42■■□□□ 1.5
VRK1-201ENST00000216639 MLH3Q9UHC1 1453 aa24.42■■□□□ 1.5
VRK1-201ENST00000216639 MAP3K4Q9Y6R4 1608 aa24.41■■□□□ 1.5
VRK1-201ENST00000216639 KIF3BO15066 747 aa24.41■■□□□ 1.5
VRK1-201ENST00000216639 YTHDC1Q96MU7 727 aaKnown RBP24.4■■□□□ 1.5
VRK1-201ENST00000216639 HECW2Q9P2P5 1572 aa24.39■■□□□ 1.5
VRK1-201ENST00000216639 RALGAPBQ86X10 1494 aa24.39■■□□□ 1.5
VRK1-201ENST00000216639 DCAF11Q8TEB1 546 aa24.39■■□□□ 1.5
VRK1-201ENST00000216639 TET3O43151 1660 aa24.39■■□□□ 1.49
VRK1-201ENST00000216639 PRDM15P57071 1507 aaPredicted RBP24.38■■□□□ 1.49
VRK1-201ENST00000216639 VWDEQ8N2E2 1590 aa24.38■■□□□ 1.49
VRK1-201ENST00000216639 A2MP01023 1474 aa24.38■■□□□ 1.49
VRK1-201ENST00000216639 SPATA31E1Q6ZUB1 1445 aa24.38■■□□□ 1.49
VRK1-201ENST00000216639 DNAJC5Q9H3Z4 198 aa24.38■■□□□ 1.49
VRK1-201ENST00000216639 E9PCH4 1651 aa24.37■■□□□ 1.49
VRK1-201ENST00000216639 ANP32CO43423 234 aa24.35■■□□□ 1.49
VRK1-201ENST00000216639 KDM2AQ9Y2K7 1162 aa24.35■■□□□ 1.49
VRK1-201ENST00000216639 WASHC2AQ641Q2 1341 aa24.35■■□□□ 1.49
VRK1-201ENST00000216639 TRPM2O94759 1503 aa24.32■■□□□ 1.48
VRK1-201ENST00000216639 USP47Q96K76 1375 aa24.32■■□□□ 1.48
VRK1-201ENST00000216639 MROH1Q8NDA8 1641 aa24.32■■□□□ 1.48
VRK1-201ENST00000216639 PTPRTO14522 1441 aa24.31■■□□□ 1.48
VRK1-201ENST00000216639 SPHKAPQ2M3C7 1700 aa24.31■■□□□ 1.48
VRK1-201ENST00000216639 RNF17Q9BXT8 1623 aaKnown RBP24.3■■□□□ 1.48
VRK1-201ENST00000216639 CCDC7Q96M83 1385 aa24.3■■□□□ 1.48
VRK1-201ENST00000216639 RGL3Q3MIN7 710 aa24.3■■□□□ 1.48
VRK1-201ENST00000216639 POLR1AO95602 1720 aaPredicted RBP24.29■■□□□ 1.48
VRK1-201ENST00000216639 CARD11Q9BXL7 1154 aa24.29■■□□□ 1.48
VRK1-201ENST00000216639 DIP2BQ9P265 1576 aa24.28■■□□□ 1.48
VRK1-201ENST00000216639 PRAG1Q86YV5 1406 aa24.28■■□□□ 1.48
VRK1-201ENST00000216639 FAM69CQ0P6D2 419 aa24.27■■□□□ 1.48
VRK1-201ENST00000216639 ABCA6Q8N139 1617 aa24.26■■□□□ 1.47
VRK1-201ENST00000216639 BCORL1Q5H9F3 1711 aa24.26■■□□□ 1.47
VRK1-201ENST00000216639 LMTK2Q8IWU2 1503 aa24.26■■□□□ 1.47
VRK1-201ENST00000216639 RAPGEF3O95398 923 aa24.26■■□□□ 1.47
VRK1-201ENST00000216639 CCER2I3L3R5 266 aa24.25■■□□□ 1.47
VRK1-201ENST00000216639 FRMPD1Q5SYB0 1578 aa24.25■■□□□ 1.47
VRK1-201ENST00000216639 RICTORQ6R327 1708 aa24.25■■□□□ 1.47
VRK1-201ENST00000216639 EFCAB6Q5THR3 1501 aa24.24■■□□□ 1.47
VRK1-201ENST00000216639 ROCK2O75116 1388 aaKnown RBP24.24■■□□□ 1.47
VRK1-201ENST00000216639 CNTLNQ9NXG0 1405 aa24.24■■□□□ 1.47
VRK1-201ENST00000216639 CEP152O94986 1710 aa24.23■■□□□ 1.47
VRK1-201ENST00000216639 TRPM1Q7Z4N2 1603 aa24.23■■□□□ 1.47
VRK1-201ENST00000216639 C11orf95C9JLR9 678 aaPredicted RBP24.22■■□□□ 1.47
VRK1-201ENST00000216639 STAC3Q96MF2 364 aa24.22■■□□□ 1.47
VRK1-201ENST00000216639 ARID4BQ4LE39 1312 aaPredicted RBP24.22■■□□□ 1.47
VRK1-201ENST00000216639 KIF7Q2M1P5 1343 aa24.21■■□□□ 1.47
VRK1-201ENST00000216639 CLTCL1P53675 1640 aa24.2■■□□□ 1.46
VRK1-201ENST00000216639 DIP2CQ9Y2E4 1556 aa24.2■■□□□ 1.46
VRK1-201ENST00000216639 NEURL4Q96JN8 1562 aa24.19■■□□□ 1.46
VRK1-201ENST00000216639 PPRC1Q5VV67 1664 aaKnown RBP24.18■■□□□ 1.46
VRK1-201ENST00000216639 LAMC1P11047 1609 aa24.17■■□□□ 1.46
VRK1-201ENST00000216639 GGT6Q6P531 493 aa24.16■■□□□ 1.46
VRK1-201ENST00000216639 GPRASP1Q5JY77 1395 aa24.16■■□□□ 1.46
VRK1-201ENST00000216639 ZMYM4Q5VZL5 1548 aa24.14■■□□□ 1.45
VRK1-201ENST00000216639 WASHC2CQ9Y4E1 1318 aa24.12■■□□□ 1.45
VRK1-201ENST00000216639 TSPOAP1O95153 1857 aa24.11■■□□□ 1.45
VRK1-201ENST00000216639 ST20-MTHFSA0A0A6YYL1 179 aa24.1■■□□□ 1.45
VRK1-201ENST00000216639 ABCC3O15438 1527 aa24.1■■□□□ 1.45
VRK1-201ENST00000216639 KIF1BO60333 1816 aa24.09■■□□□ 1.45
VRK1-201ENST00000216639 YEATS2Q9ULM3 1422 aa24.09■■□□□ 1.45
VRK1-201ENST00000216639 MADDQ8WXG6 1647 aa24.08■■□□□ 1.45
VRK1-201ENST00000216639 SCAF1Q9H7N4 1312 aaKnown RBP24.08■■□□□ 1.44
VRK1-201ENST00000216639 NBPF1Q3BBV0 1214 aa24.07■■□□□ 1.44
VRK1-201ENST00000216639 NPATQ14207 1427 aa24.07■■□□□ 1.44
VRK1-201ENST00000216639 ZC3H13Q5T200 1668 aaKnown RBP24.06■■□□□ 1.44
VRK1-201ENST00000216639 CAMSAP1Q5T5Y3 1602 aa24.06■■□□□ 1.44
VRK1-201ENST00000216639 POLR3GLQ9BT43 218 aa24.04■■□□□ 1.44
VRK1-201ENST00000216639 UGGT1Q9NYU2 1555 aa24.04■■□□□ 1.44
VRK1-201ENST00000216639 MYOM2P54296 1465 aa24.02■■□□□ 1.44
VRK1-201ENST00000216639 KIF13AQ9H1H9 1805 aa24■■□□□ 1.43
VRK1-201ENST00000216639 ARHGAP31Q2M1Z3 1444 aa24■■□□□ 1.43
VRK1-201ENST00000216639 REREQ9P2R6 1566 aa23.99■■□□□ 1.43
VRK1-201ENST00000216639 PRKRIP1Q9H875 184 aaPredicted RBP23.98■■□□□ 1.43
VRK1-201ENST00000216639 KIAA1210Q9ULL0 1709 aa23.98■■□□□ 1.43
VRK1-201ENST00000216639 ADGRB3O60242 1522 aa23.98■■□□□ 1.43
VRK1-201ENST00000216639 GTF3C3Q9Y5Q9 886 aa23.97■■□□□ 1.43
VRK1-201ENST00000216639 NOS1P29475 1434 aa23.96■■□□□ 1.43
VRK1-201ENST00000216639 MROH2AA6NES4 1674 aa23.95■■□□□ 1.42
VRK1-201ENST00000216639 IFT172Q9UG01 1749 aa23.95■■□□□ 1.42
VRK1-201ENST00000216639 AGLP35573 1532 aa23.93■■□□□ 1.42
VRK1-201ENST00000216639 IQGAP1P46940 1657 aa23.93■■□□□ 1.42
VRK1-201ENST00000216639 SCAF11Q99590 1463 aaKnown RBP23.93■■□□□ 1.42
VRK1-201ENST00000216639 CHGAP10645 457 aaKnown RBP23.93■■□□□ 1.42
VRK1-201ENST00000216639 COL17A1Q9UMD9 1497 aaPredicted RBP23.92■■□□□ 1.42
VRK1-201ENST00000216639 RPGRIP1LQ68CZ1 1315 aa23.92■■□□□ 1.42
VRK1-201ENST00000216639 TMF1P82094 1093 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms