RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 TRIM52Q96A61 297 aa15.08■□□□□ 0.01
APOBEC3D-201ENST00000216099 PZPP20742 1482 aa15.08■□□□□ 0
APOBEC3D-201ENST00000216099 CCDC141Q6ZP82 1450 aa15.08■□□□□ 0
APOBEC3D-201ENST00000216099 MAPK8IP2Q13387 824 aaPredicted RBP15.07■□□□□ 0
APOBEC3D-201ENST00000216099 PLEKHH2Q8IVE3 1493 aa15.07■□□□□ 0
APOBEC3D-201ENST00000216099 MIER1Q8N108 512 aa15.06■□□□□ 0
APOBEC3D-201ENST00000216099 ATXN8OSP0DMR3 200 aa15.05■□□□□ 0
APOBEC3D-201ENST00000216099 ZNF777Q9ULD5 760 aaPredicted RBP15.05■□□□□ 0
APOBEC3D-201ENST00000216099 PLXNC1O60486 1568 aa15.05■□□□□ -0
APOBEC3D-201ENST00000216099 ARHGAP5Q13017 1502 aa15.05■□□□□ -0
APOBEC3D-201ENST00000216099 RPRD2Q5VT52 1461 aaKnown RBP15.05■□□□□ -0
APOBEC3D-201ENST00000216099 ANKRD30BQ9BXX2 1392 aa15.04■□□□□ -0
APOBEC3D-201ENST00000216099 CHMP4AQ9BY43 222 aa15.04■□□□□ -0
APOBEC3D-201ENST00000216099 ARAP3Q8WWN8 1544 aa15.04■□□□□ -0
APOBEC3D-201ENST00000216099 RSPH4AQ5TD94 716 aa15.04■□□□□ -0
APOBEC3D-201ENST00000216099 ANKRD50Q9ULJ7 1429 aa15.04■□□□□ -0
APOBEC3D-201ENST00000216099 ECM2O94769 699 aaPredicted RBP15.03■□□□□ -0
APOBEC3D-201ENST00000216099 KIAA1107Q9UPP5 1409 aa15.03■□□□□ -0
APOBEC3D-201ENST00000216099 SYCP2Q9BX26 1530 aa15.03■□□□□ -0
APOBEC3D-201ENST00000216099 ZNF428Q96B54 188 aa15.02■□□□□ -0
APOBEC3D-201ENST00000216099 CENPBP07199 599 aaPredicted RBP15.01□□□□□ -0.01
APOBEC3D-201ENST00000216099 UNC13BO14795 1591 aa15□□□□□ -0.01
APOBEC3D-201ENST00000216099 TEX14Q8IWB6 1497 aa15□□□□□ -0.01
APOBEC3D-201ENST00000216099 CCDC9Q9Y3X0 531 aaKnown RBP14.99□□□□□ -0.01
APOBEC3D-201ENST00000216099 TSPY4P0CV99 314 aa14.99□□□□□ -0.01
APOBEC3D-201ENST00000216099 TSPY10P0CW01 314 aa14.99□□□□□ -0.01
APOBEC3D-201ENST00000216099 PLCH2O75038 1416 aa14.99□□□□□ -0.01
APOBEC3D-201ENST00000216099 ABCC1P33527 1531 aa14.98□□□□□ -0.01
APOBEC3D-201ENST00000216099 KIF15Q9NS87 1388 aa14.97□□□□□ -0.01
APOBEC3D-201ENST00000216099 ABCA9Q8IUA7 1624 aa14.96□□□□□ -0.01
APOBEC3D-201ENST00000216099 POLR1AO95602 1720 aaPredicted RBP14.96□□□□□ -0.01
APOBEC3D-201ENST00000216099 HNRNPMP52272 730 aaKnown RBP eCLIP14.95□□□□□ -0.02
APOBEC3D-201ENST00000216099 WDR7Q9Y4E6 1490 aa14.94□□□□□ -0.02
APOBEC3D-201ENST00000216099 CHGAP10645 457 aaKnown RBP14.94□□□□□ -0.02
APOBEC3D-201ENST00000216099 IQGAP3Q86VI3 1631 aa14.93□□□□□ -0.02
APOBEC3D-201ENST00000216099 DUOX2Q9NRD8 1548 aa14.93□□□□□ -0.02
APOBEC3D-201ENST00000216099 SAMD1Q6SPF0 538 aaPredicted RBP14.93□□□□□ -0.02
APOBEC3D-201ENST00000216099 ARHGEF12Q9NZN5 1544 aa14.92□□□□□ -0.02
APOBEC3D-201ENST00000216099 NEUROD2Q15784 382 aa14.92□□□□□ -0.02
APOBEC3D-201ENST00000216099 FAM135AQ9P2D6 1515 aa14.9□□□□□ -0.02
APOBEC3D-201ENST00000216099 MAGI2Q86UL8 1455 aa14.9□□□□□ -0.02
APOBEC3D-201ENST00000216099 L3MBTL2Q969R5 705 aa14.9□□□□□ -0.02
APOBEC3D-201ENST00000216099 NUP155O75694 1391 aa14.89□□□□□ -0.03
APOBEC3D-201ENST00000216099 MYCNP04198 464 aaPredicted RBP14.89□□□□□ -0.03
APOBEC3D-201ENST00000216099 EFCAB2Q5VUJ9 269 aa14.89□□□□□ -0.03
APOBEC3D-201ENST00000216099 ERBINQ96RT1 1412 aa14.88□□□□□ -0.03
APOBEC3D-201ENST00000216099 DHX37Q8IY37 1157 aaKnown RBP14.87□□□□□ -0.03
APOBEC3D-201ENST00000216099 KCNH8Q96L42 1107 aa14.86□□□□□ -0.03
APOBEC3D-201ENST00000216099 RTEL1-TNFRSF6BF6WH68 1400 aa14.86□□□□□ -0.03
APOBEC3D-201ENST00000216099 INO80Q9ULG1 1556 aaPredicted RBP14.86□□□□□ -0.03
APOBEC3D-201ENST00000216099 ZFYVE16Q7Z3T8 1539 aa14.85□□□□□ -0.03
APOBEC3D-201ENST00000216099 OSCARQ8IYS5 282 aa14.85□□□□□ -0.03
APOBEC3D-201ENST00000216099 CFAP74Q9C0B2 1584 aa14.84□□□□□ -0.03
APOBEC3D-201ENST00000216099 DEPDC5O75140 1603 aa14.84□□□□□ -0.03
APOBEC3D-201ENST00000216099 UHRF1BP1Q6BDS2 1440 aa14.83□□□□□ -0.04
APOBEC3D-201ENST00000216099 ASXL2Q76L83 1435 aa14.83□□□□□ -0.04
APOBEC3D-201ENST00000216099 DDX10Q13206 875 aaKnown RBP14.83□□□□□ -0.04
APOBEC3D-201ENST00000216099 ZMYND15Q9H091 742 aa14.83□□□□□ -0.04
APOBEC3D-201ENST00000216099 TRAPPC8Q9Y2L5 1435 aa14.82□□□□□ -0.04
APOBEC3D-201ENST00000216099 EIF4G2P78344 907 aaKnown RBP eCLIP14.82□□□□□ -0.04
APOBEC3D-201ENST00000216099 EIF2AK4Q9P2K8 1649 aaKnown RBP14.81□□□□□ -0.04
APOBEC3D-201ENST00000216099 FANCAO15360 1455 aa14.81□□□□□ -0.04
APOBEC3D-201ENST00000216099 HSPA5P11021 654 aaKnown RBP14.81□□□□□ -0.04
APOBEC3D-201ENST00000216099 ZBTB7CA1YPR0 619 aa14.8□□□□□ -0.04
APOBEC3D-201ENST00000216099 CDK11BP21127 795 aaKnown RBP14.8□□□□□ -0.04
APOBEC3D-201ENST00000216099 SPATA31E1Q6ZUB1 1445 aa14.8□□□□□ -0.04
APOBEC3D-201ENST00000216099 NBPF8Q3BBV2 869 aa14.8□□□□□ -0.04
APOBEC3D-201ENST00000216099 YTHDC1Q96MU7 727 aaKnown RBP14.8□□□□□ -0.04
APOBEC3D-201ENST00000216099 ATP7AQ04656 1500 aa14.79□□□□□ -0.04
APOBEC3D-201ENST00000216099 ATP10AO60312 1499 aa14.79□□□□□ -0.04
APOBEC3D-201ENST00000216099 RALGAPBQ86X10 1494 aa14.79□□□□□ -0.04
APOBEC3D-201ENST00000216099 KDM5CP41229 1560 aa14.79□□□□□ -0.04
APOBEC3D-201ENST00000216099 HIRIP3Q9BW71 556 aaPredicted RBP14.79□□□□□ -0.04
APOBEC3D-201ENST00000216099 LMOD2Q6P5Q4 547 aa14.76□□□□□ -0.05
APOBEC3D-201ENST00000216099 TET3O43151 1660 aa14.76□□□□□ -0.05
APOBEC3D-201ENST00000216099 E9PCH4 1651 aa14.76□□□□□ -0.05
APOBEC3D-201ENST00000216099 CCER2I3L3R5 266 aa14.75□□□□□ -0.05
APOBEC3D-201ENST00000216099 ADGRL1O94910 1474 aa14.75□□□□□ -0.05
APOBEC3D-201ENST00000216099 RSPH6AQ9H0K4 717 aa14.75□□□□□ -0.05
APOBEC3D-201ENST00000216099 SPAG9O60271 1321 aaKnown RBP14.75□□□□□ -0.05
APOBEC3D-201ENST00000216099 LAMC1P11047 1609 aa14.75□□□□□ -0.05
APOBEC3D-201ENST00000216099 TRPM1Q7Z4N2 1603 aa14.75□□□□□ -0.05
APOBEC3D-201ENST00000216099 VWDEQ8N2E2 1590 aa14.74□□□□□ -0.05
APOBEC3D-201ENST00000216099 SPHKAPQ2M3C7 1700 aa14.74□□□□□ -0.05
APOBEC3D-201ENST00000216099 KIDINS220Q9ULH0 1771 aa14.74□□□□□ -0.05
APOBEC3D-201ENST00000216099 PLA2R1Q13018 1463 aa14.74□□□□□ -0.05
APOBEC3D-201ENST00000216099 CEP152O94986 1710 aa14.73□□□□□ -0.05
APOBEC3D-201ENST00000216099 SPDYE4A6NLX3 237 aa14.73□□□□□ -0.05
APOBEC3D-201ENST00000216099 WASHC2AQ641Q2 1341 aa14.73□□□□□ -0.05
APOBEC3D-201ENST00000216099 PDIA4P13667 645 aaKnown RBP14.73□□□□□ -0.05
APOBEC3D-201ENST00000216099 CCDC144AA2RUR9 1427 aa14.73□□□□□ -0.05
APOBEC3D-201ENST00000216099 CCDC7Q96M83 1385 aa14.73□□□□□ -0.05
APOBEC3D-201ENST00000216099 ANP32CO43423 234 aa14.72□□□□□ -0.05
APOBEC3D-201ENST00000216099 CNTLNQ9NXG0 1405 aa14.72□□□□□ -0.05
APOBEC3D-201ENST00000216099 BCORL1Q5H9F3 1711 aa14.72□□□□□ -0.05
APOBEC3D-201ENST00000216099 PRDM15P57071 1507 aaPredicted RBP14.71□□□□□ -0.05
APOBEC3D-201ENST00000216099 SLC24A3Q9HC58 644 aa14.7□□□□□ -0.06
APOBEC3D-201ENST00000216099 SCAPERQ9BY12 1400 aa14.7□□□□□ -0.06
APOBEC3D-201ENST00000216099 FOXD4L5Q5VV16 416 aaPredicted RBP14.7□□□□□ -0.06
APOBEC3D-201ENST00000216099 FOXD4L4Q8WXT5 416 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms