RNA–Protein interactions for RNA: ENST00000181839.8

CDK13-201, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK13, Length 7,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-201ENST00000181839 IFFO2Q5TF58 517 aa22.35■■□□□ 1.17
CDK13-201ENST00000181839 APPP05067 770 aa22.34■■□□□ 1.17
CDK13-201ENST00000181839 CALD1Q05682 793 aaKnown RBP22.34■■□□□ 1.17
CDK13-201ENST00000181839 CLUAP1Q96AJ1 413 aa22.33■■□□□ 1.17
CDK13-201ENST00000181839 CCDC43Q96MW1 224 aaKnown RBP22.33■■□□□ 1.17
CDK13-201ENST00000181839 TNNT3P45378 269 aaPredicted RBP22.32■■□□□ 1.16
CDK13-201ENST00000181839 ROCK2O75116 1388 aaKnown RBP22.31■■□□□ 1.16
CDK13-201ENST00000181839 EIF2S2P20042 333 aaKnown RBP22.31■■□□□ 1.16
CDK13-201ENST00000181839 MCTP1Q6DN14 999 aa22.3■■□□□ 1.16
CDK13-201ENST00000181839 CCAR1Q8IX12 1150 aaKnown RBP22.29■■□□□ 1.16
CDK13-201ENST00000181839 FOSBP53539 338 aa22.28■■□□□ 1.16
CDK13-201ENST00000181839 KDM4AO75164 1064 aa22.28■■□□□ 1.16
CDK13-201ENST00000181839 TSR1Q2NL82 804 aaKnown RBP22.28■■□□□ 1.16
CDK13-201ENST00000181839 GBP4Q96PP9 640 aa22.28■■□□□ 1.16
CDK13-201ENST00000181839 KIF16BQ96L93 1317 aa22.28■■□□□ 1.16
CDK13-201ENST00000181839 CFAP44Q96MT7 982 aa22.28■■□□□ 1.16
CDK13-201ENST00000181839 PAF1Q8N7H5 531 aa22.27■■□□□ 1.16
CDK13-201ENST00000181839 ELL2O00472 640 aaPredicted RBP22.27■■□□□ 1.16
CDK13-201ENST00000181839 KIF3BO15066 747 aa22.26■■□□□ 1.15
CDK13-201ENST00000181839 FAM184AQ8NB25 1140 aa22.26■■□□□ 1.15
CDK13-201ENST00000181839 TPM2P07951 284 aa22.26■■□□□ 1.15
CDK13-201ENST00000181839 TMEM132AQ24JP5 1023 aa22.25■■□□□ 1.15
CDK13-201ENST00000181839 RBM33Q96EV2 1170 aaKnown RBP22.25■■□□□ 1.15
CDK13-201ENST00000181839 IBSPP21815 317 aaPredicted RBP22.25■■□□□ 1.15
CDK13-201ENST00000181839 SYAP1Q96A49 352 aaPredicted RBP22.25■■□□□ 1.15
CDK13-201ENST00000181839 TTC5Q8N0Z6 440 aa22.24■■□□□ 1.15
CDK13-201ENST00000181839 WASHC2CQ9Y4E1 1318 aa22.24■■□□□ 1.15
CDK13-201ENST00000181839 PKD2Q13563 968 aa22.24■■□□□ 1.15
CDK13-201ENST00000181839 SYNE3Q6ZMZ3 975 aa22.24■■□□□ 1.15
CDK13-201ENST00000181839 RRP7AQ9Y3A4 280 aaKnown RBP22.24■■□□□ 1.15
CDK13-201ENST00000181839 KTN1Q86UP2 1357 aaKnown RBP22.23■■□□□ 1.15
CDK13-201ENST00000181839 FAM177BA6PVY3 158 aa22.22■■□□□ 1.15
CDK13-201ENST00000181839 VSIG10Q8N0Z9 540 aa22.22■■□□□ 1.15
CDK13-201ENST00000181839 HMMRO75330 724 aa22.21■■□□□ 1.15
CDK13-201ENST00000181839 IKQ13123 557 aaPredicted RBP22.21■■□□□ 1.15
CDK13-201ENST00000181839 RWDD1Q9H446 243 aaPredicted RBP22.21■■□□□ 1.15
CDK13-201ENST00000181839 TRAK1Q9UPV9 953 aa22.2■■□□□ 1.14
CDK13-201ENST00000181839 CCDC27Q2M243 656 aa22.2■■□□□ 1.14
CDK13-201ENST00000181839 BAZ1BQ9UIG0 1483 aaKnown RBP22.2■■□□□ 1.14
CDK13-201ENST00000181839 PLIN1O60240 522 aa22.19■■□□□ 1.14
CDK13-201ENST00000181839 GOLGA3Q08378 1498 aa22.19■■□□□ 1.14
CDK13-201ENST00000181839 ZFYVE27Q5T4F4 411 aa22.19■■□□□ 1.14
CDK13-201ENST00000181839 PSME1Q06323 249 aa22.18■■□□□ 1.14
CDK13-201ENST00000181839 TERF2IPQ9NYB0 399 aa22.18■■□□□ 1.14
CDK13-201ENST00000181839 USP35Q9P2H5 1018 aa22.18■■□□□ 1.14
CDK13-201ENST00000181839 CSPP1Q1MSJ5 1256 aa22.17■■□□□ 1.14
CDK13-201ENST00000181839 CCDC180Q9P1Z9 1646 aa22.17■■□□□ 1.14
CDK13-201ENST00000181839 BCL11BQ9C0K0 894 aaPredicted RBP22.16■■□□□ 1.14
CDK13-201ENST00000181839 SF3B2Q13435 895 aaKnown RBP22.16■■□□□ 1.14
CDK13-201ENST00000181839 HNRNPMP52272 730 aaKnown RBP eCLIP22.15■■□□□ 1.146e-9■■■■■ 33.2
CDK13-201ENST00000181839 ODF2Q5BJF6 829 aa22.15■■□□□ 1.14
CDK13-201ENST00000181839 NFXL1Q6ZNB6 911 aa22.15■■□□□ 1.14
CDK13-201ENST00000181839 R3HCC1Q9Y3T6 440 aaKnown RBP22.15■■□□□ 1.14
CDK13-201ENST00000181839 CYB5RLQ6IPT4 315 aa22.14■■□□□ 1.14
CDK13-201ENST00000181839 KIF27Q86VH2 1401 aa22.14■■□□□ 1.13
CDK13-201ENST00000181839 CEP162Q5TB80 1403 aa22.13■■□□□ 1.13
CDK13-201ENST00000181839 TRIM29Q14134 588 aa22.13■■□□□ 1.13
CDK13-201ENST00000181839 C9orf78Q9NZ63 289 aaPredicted RBP22.13■■□□□ 1.13
CDK13-201ENST00000181839 CT47A1Q5JQC4 288 aaPredicted RBP22.13■■□□□ 1.13
CDK13-201ENST00000181839 TEFQ10587 303 aa22.12■■□□□ 1.13
CDK13-201ENST00000181839 HSPA5P11021 654 aaKnown RBP22.12■■□□□ 1.13
CDK13-201ENST00000181839 NAP1L1P55209 391 aaKnown RBP22.12■■□□□ 1.13
CDK13-201ENST00000181839 HDAC5Q9UQL6 1122 aa22.12■■□□□ 1.13
CDK13-201ENST00000181839 NUTM2BA6NNL0 878 aaPredicted RBP22.11■■□□□ 1.13
CDK13-201ENST00000181839 NUTM2EB1AL46 878 aaPredicted RBP22.11■■□□□ 1.13
CDK13-201ENST00000181839 NUTM2GQ5VZR2 741 aa22.11■■□□□ 1.13
CDK13-201ENST00000181839 NUTM2AQ8IVF1 878 aaPredicted RBP22.11■■□□□ 1.13
CDK13-201ENST00000181839 BCL2L13Q9BXK5 485 aa22.1■■□□□ 1.13
CDK13-201ENST00000181839 PPM1FP49593 454 aaPredicted RBP22.09■■□□□ 1.13
CDK13-201ENST00000181839 ZNF428Q96B54 188 aa22.09■■□□□ 1.13
CDK13-201ENST00000181839 CHMP4AQ9BY43 222 aa22.09■■□□□ 1.13
CDK13-201ENST00000181839 ZNF592Q92610 1267 aa22.09■■□□□ 1.13
CDK13-201ENST00000181839 RCAN3Q9UKA8 241 aa22.08■■□□□ 1.13
CDK13-201ENST00000181839 PMFBP1Q8TBY8 1022 aa22.08■■□□□ 1.13
CDK13-201ENST00000181839 GOLGA6L19H0YKK7 550 aa22.07■■□□□ 1.12
CDK13-201ENST00000181839 TPM1P09493 284 aa22.07■■□□□ 1.12
CDK13-201ENST00000181839 WWC2Q6AWC2 1192 aa22.07■■□□□ 1.12
CDK13-201ENST00000181839 NEXNQ0ZGT2 675 aa22.06■■□□□ 1.12
CDK13-201ENST00000181839 RB1CC1Q8TDY2 1594 aa22.06■■□□□ 1.12
CDK13-201ENST00000181839 TCERG1O14776 1098 aaKnown RBP22.06■■□□□ 1.12
CDK13-201ENST00000181839 ANKRD45Q5TZF3 282 aa22.06■■□□□ 1.12
CDK13-201ENST00000181839 ERICH2A1L162 156 aa22.05■■□□□ 1.12
CDK13-201ENST00000181839 PIP4K2BP78356 416 aa22.05■■□□□ 1.12
CDK13-201ENST00000181839 AIMP1Q12904 312 aaKnown RBP22.05■■□□□ 1.12
CDK13-201ENST00000181839 KIF3AQ9Y496 699 aa22.04■■□□□ 1.12
CDK13-201ENST00000181839 ANO2Q9NQ90 1003 aa22.04■■□□□ 1.12
CDK13-201ENST00000181839 ATF3P18847 181 aa22.04■■□□□ 1.12
CDK13-201ENST00000181839 COG3Q96JB2 828 aa22.04■■□□□ 1.12
CDK13-201ENST00000181839 EIF3AQ14152 1382 aaKnown RBP22.04■■□□□ 1.12
CDK13-201ENST00000181839 DEKP35659 375 aaKnown RBP22.03■■□□□ 1.12
CDK13-201ENST00000181839 ST18O60284 1047 aa22.03■■□□□ 1.12
CDK13-201ENST00000181839 PTMSP20962 102 aa22.03■■□□□ 1.12
CDK13-201ENST00000181839 SETQ01105 290 aaPredicted RBP22.03■■□□□ 1.12
CDK13-201ENST00000181839 SKIDA1Q1XH10 827 aa22.03■■□□□ 1.12
CDK13-201ENST00000181839 NUP155O75694 1391 aa22.02■■□□□ 1.12
CDK13-201ENST00000181839 EPS15P42566 896 aa22.02■■□□□ 1.12
CDK13-201ENST00000181839 WDR70Q9NW82 654 aa22.02■■□□□ 1.12
CDK13-201ENST00000181839 LMOD3Q0VAK6 560 aa22.02■■□□□ 1.12
CDK13-201ENST00000181839 STK11IPQ8N1F8 1099 aa22.02■■□□□ 1.12
CDK13-201ENST00000181839 ATP2B2Q01814 1243 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms