RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 FBLN2P98095 1184 aa26.24■■□□□ 1.79
PPP1R3F-201ENST00000055335 ADAMTS8Q9UP79 889 aa26.23■■□□□ 1.79
PPP1R3F-201ENST00000055335 TSPY4P0CV99 314 aa26.22■■□□□ 1.79
PPP1R3F-201ENST00000055335 TSPY10P0CW01 314 aa26.22■■□□□ 1.79
PPP1R3F-201ENST00000055335 ANKRD30AQ9BXX3 1397 aa26.21■■□□□ 1.79
PPP1R3F-201ENST00000055335 ANKRD50Q9ULJ7 1429 aa26.2■■□□□ 1.79
PPP1R3F-201ENST00000055335 LAMC3Q9Y6N6 1575 aa26.2■■□□□ 1.79
PPP1R3F-201ENST00000055335 FAM161AQ3B820 660 aa26.2■■□□□ 1.78
PPP1R3F-201ENST00000055335 WDR43Q15061 677 aaKnown RBP eCLIP26.19■■□□□ 1.78
PPP1R3F-201ENST00000055335 KDM5CP41229 1560 aa26.17■■□□□ 1.78
PPP1R3F-201ENST00000055335 HNRNPMP52272 730 aaKnown RBP eCLIP26.17■■□□□ 1.78
PPP1R3F-201ENST00000055335 SLKQ9H2G2 1235 aaPredicted RBP26.16■■□□□ 1.78
PPP1R3F-201ENST00000055335 CCDC146Q8IYE0 955 aa26.16■■□□□ 1.78
PPP1R3F-201ENST00000055335 MBD5Q9P267 1494 aa26.15■■□□□ 1.78
PPP1R3F-201ENST00000055335 CENPQQ7L2Z9 268 aaPredicted RBP26.15■■□□□ 1.78
PPP1R3F-201ENST00000055335 PER1O15534 1290 aaPredicted RBP26.14■■□□□ 1.78
PPP1R3F-201ENST00000055335 POLR1AO95602 1720 aaPredicted RBP26.14■■□□□ 1.77
PPP1R3F-201ENST00000055335 DNMT1P26358 1616 aaKnown RBP26.13■■□□□ 1.77
PPP1R3F-201ENST00000055335 C8orf34Q49A92 452 aa26.13■■□□□ 1.77
PPP1R3F-201ENST00000055335 IQGAP2Q13576 1575 aa26.12■■□□□ 1.77
PPP1R3F-201ENST00000055335 CAMSAP2Q08AD1 1489 aa26.12■■□□□ 1.77
PPP1R3F-201ENST00000055335 WDR62O43379 1518 aa26.11■■□□□ 1.77
PPP1R3F-201ENST00000055335 PARD3Q8TEW0 1356 aa26.11■■□□□ 1.77
PPP1R3F-201ENST00000055335 RALGAPBQ86X10 1494 aa26.11■■□□□ 1.77
PPP1R3F-201ENST00000055335 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.08■■□□□ 1.77
PPP1R3F-201ENST00000055335 KIF14Q15058 1648 aa26.07■■□□□ 1.76
PPP1R3F-201ENST00000055335 GOLGA2Q08379 1002 aa26.06■■□□□ 1.76
PPP1R3F-201ENST00000055335 KNSTRNQ9Y448 316 aa26.05■■□□□ 1.76
PPP1R3F-201ENST00000055335 KDM2BQ8NHM5 1336 aa26.05■■□□□ 1.76
PPP1R3F-201ENST00000055335 PLEKHD1A6NEE1 506 aa26.05■■□□□ 1.76
PPP1R3F-201ENST00000055335 CANXP27824 592 aaKnown RBP26.05■■□□□ 1.76
PPP1R3F-201ENST00000055335 SPRYD3Q8NCJ5 442 aa26.05■■□□□ 1.76
PPP1R3F-201ENST00000055335 NUP153P49790 1475 aaKnown RBP26.05■■□□□ 1.76
PPP1R3F-201ENST00000055335 POGKQ9P215 609 aa26.04■■□□□ 1.76
PPP1R3F-201ENST00000055335 DISP3Q9P2K9 1392 aa26.04■■□□□ 1.76
PPP1R3F-201ENST00000055335 BCAR3O75815 825 aa26.04■■□□□ 1.76
PPP1R3F-201ENST00000055335 TMF1P82094 1093 aa26.03■■□□□ 1.76
PPP1R3F-201ENST00000055335 DUSP27Q5VZP5 1158 aa26.03■■□□□ 1.76
PPP1R3F-201ENST00000055335 KIAA0586Q9BVV6 1533 aa26.03■■□□□ 1.76
PPP1R3F-201ENST00000055335 UHRF1BP1Q6BDS2 1440 aa26.01■■□□□ 1.75
PPP1R3F-201ENST00000055335 PLEKHH1Q9ULM0 1364 aa25.99■■□□□ 1.75
PPP1R3F-201ENST00000055335 GPATCH8Q9UKJ3 1502 aaKnown RBP25.99■■□□□ 1.75
PPP1R3F-201ENST00000055335 TROQ12816 1431 aaPredicted RBP25.98■■□□□ 1.75
PPP1R3F-201ENST00000055335 APAF1O14727 1248 aa25.97■■□□□ 1.75
PPP1R3F-201ENST00000055335 NEUROD2Q15784 382 aa25.97■■□□□ 1.75
PPP1R3F-201ENST00000055335 SEC24BO95487 1268 aa25.96■■□□□ 1.75
PPP1R3F-201ENST00000055335 PLB1Q6P1J6 1458 aa25.96■■□□□ 1.75
PPP1R3F-201ENST00000055335 PPP2R1AP30153 589 aa25.95■■□□□ 1.74
PPP1R3F-201ENST00000055335 GZF1Q9H116 711 aaPredicted RBP25.95■■□□□ 1.74
PPP1R3F-201ENST00000055335 TESK2Q96S53 571 aa25.95■■□□□ 1.74
PPP1R3F-201ENST00000055335 CCDC144AA2RUR9 1427 aa25.94■■□□□ 1.74
PPP1R3F-201ENST00000055335 SPINK5Q9NQ38 1064 aaPredicted RBP25.94■■□□□ 1.74
PPP1R3F-201ENST00000055335 CHMP7Q8WUX9 453 aaPredicted RBP25.94■■□□□ 1.74
PPP1R3F-201ENST00000055335 C9orf84Q5VXU9 1444 aa25.94■■□□□ 1.74
PPP1R3F-201ENST00000055335 IGHDP01880 384 aa25.94■■□□□ 1.74
PPP1R3F-201ENST00000055335 COG6Q9Y2V7 657 aa25.93■■□□□ 1.74
PPP1R3F-201ENST00000055335 KIF21AQ7Z4S6 1674 aa25.92■■□□□ 1.74
PPP1R3F-201ENST00000055335 PANK1Q8TE04 598 aa25.9■■□□□ 1.74
PPP1R3F-201ENST00000055335 UBE2Q2Q8WVN8 375 aa25.89■■□□□ 1.74
PPP1R3F-201ENST00000055335 BECN1Q14457 450 aa25.88■■□□□ 1.73
PPP1R3F-201ENST00000055335 BLMP54132 1417 aaPredicted RBP25.86■■□□□ 1.73
PPP1R3F-201ENST00000055335 SLFN5Q08AF3 891 aa25.86■■□□□ 1.73
PPP1R3F-201ENST00000055335 FAM43AQ8N2R8 423 aa25.86■■□□□ 1.73
PPP1R3F-201ENST00000055335 DISP1Q96F81 1524 aa25.85■■□□□ 1.73
PPP1R3F-201ENST00000055335 ERBINQ96RT1 1412 aa25.84■■□□□ 1.73
PPP1R3F-201ENST00000055335 RSPH6AQ9H0K4 717 aa25.84■■□□□ 1.73
PPP1R3F-201ENST00000055335 PRAG1Q86YV5 1406 aa25.84■■□□□ 1.73
PPP1R3F-201ENST00000055335 BCL2L13Q9BXK5 485 aa25.84■■□□□ 1.73
PPP1R3F-201ENST00000055335 TNNT2P45379 298 aaPredicted RBP25.83■■□□□ 1.73
PPP1R3F-201ENST00000055335 DMRT2Q9Y5R5 561 aa25.82■■□□□ 1.72
PPP1R3F-201ENST00000055335 CLUAP1Q96AJ1 413 aa25.81■■□□□ 1.72
PPP1R3F-201ENST00000055335 RRP7AQ9Y3A4 280 aaKnown RBP25.81■■□□□ 1.72
PPP1R3F-201ENST00000055335 ZNF608Q9ULD9 1512 aaPredicted RBP25.8■■□□□ 1.72
PPP1R3F-201ENST00000055335 UPF2Q9HAU5 1272 aaKnown RBP25.8■■□□□ 1.72
PPP1R3F-201ENST00000055335 ARHGEF12Q9NZN5 1544 aa25.8■■□□□ 1.72
PPP1R3F-201ENST00000055335 RAPGEF6Q8TEU7 1601 aa25.8■■□□□ 1.72
PPP1R3F-201ENST00000055335 RRAGDQ9NQL2 400 aaPredicted RBP25.79■■□□□ 1.72
PPP1R3F-201ENST00000055335 NAP1L5Q96NT1 182 aaPredicted RBP25.79■■□□□ 1.72
PPP1R3F-201ENST00000055335 ZMYM4Q5VZL5 1548 aa25.79■■□□□ 1.72
PPP1R3F-201ENST00000055335 ADGRL2O95490 1459 aa25.78■■□□□ 1.72
PPP1R3F-201ENST00000055335 JPH4Q96JJ6 628 aa25.78■■□□□ 1.72
PPP1R3F-201ENST00000055335 KIAA0556O60303 1618 aa25.76■■□□□ 1.71
PPP1R3F-201ENST00000055335 USP19O94966 1318 aa25.75■■□□□ 1.71
PPP1R3F-201ENST00000055335 TARBP1Q13395 1621 aaKnown RBP25.75■■□□□ 1.71
PPP1R3F-201ENST00000055335 ADAMTS12P58397 1594 aa25.74■■□□□ 1.71
PPP1R3F-201ENST00000055335 COL17A1Q9UMD9 1497 aaPredicted RBP25.73■■□□□ 1.71
PPP1R3F-201ENST00000055335 AMER1Q5JTC6 1135 aaPredicted RBP25.73■■□□□ 1.71
PPP1R3F-201ENST00000055335 CENPJQ9HC77 1338 aaPredicted RBP25.73■■□□□ 1.71
PPP1R3F-201ENST00000055335 TNNQ9UQP3 1299 aa25.72■■□□□ 1.71
PPP1R3F-201ENST00000055335 ZNF521Q96K83 1311 aa25.7■■□□□ 1.7
PPP1R3F-201ENST00000055335 ADGBQ8N7X0 1667 aa25.7■■□□□ 1.7
PPP1R3F-201ENST00000055335 PANK2Q9BZ23 570 aa25.7■■□□□ 1.7
PPP1R3F-201ENST00000055335 PLEKHH2Q8IVE3 1493 aa25.7■■□□□ 1.7
PPP1R3F-201ENST00000055335 E9PSI1 815 aa25.7■■□□□ 1.7
PPP1R3F-201ENST00000055335 L1TD1Q5T7N2 865 aaKnown RBP25.7■■□□□ 1.7
PPP1R3F-201ENST00000055335 PBRM1Q86U86 1689 aa25.7■■□□□ 1.7
PPP1R3F-201ENST00000055335 A2MP01023 1474 aa25.67■■□□□ 1.7
PPP1R3F-201ENST00000055335 GOLGA6L3A6NEY3 463 aa25.67■■□□□ 1.7
PPP1R3F-201ENST00000055335 CGNL1Q0VF96 1302 aa25.67■■□□□ 1.7
PPP1R3F-201ENST00000055335 E9PCH4 1651 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms