RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 EVA1CP58658 441 aa13.22□□□□□ -0.29
NIPAL3-201ENST00000003912 DHX57Q6P158 1386 aaKnown RBP13.22□□□□□ -0.29
NIPAL3-201ENST00000003912 KCNJ4P48050 445 aa13.22□□□□□ -0.29
NIPAL3-201ENST00000003912 PHLDB1Q86UU1 1377 aa13.21□□□□□ -0.29
NIPAL3-201ENST00000003912 ATF3P18847 181 aa13.21□□□□□ -0.29
NIPAL3-201ENST00000003912 PRXQ9BXM0 1461 aa13.21□□□□□ -0.29
NIPAL3-201ENST00000003912 HDAC5Q9UQL6 1122 aa13.21□□□□□ -0.29
NIPAL3-201ENST00000003912 ABCA10Q8WWZ4 1543 aa13.21□□□□□ -0.29
NIPAL3-201ENST00000003912 RGS3P49796 1198 aa13.21□□□□□ -0.3
NIPAL3-201ENST00000003912 GOLGA6L22H0YM25 854 aa13.2□□□□□ -0.3
NIPAL3-201ENST00000003912 PSME1Q06323 249 aa13.2□□□□□ -0.3
NIPAL3-201ENST00000003912 FGD1P98174 961 aa13.2□□□□□ -0.3
NIPAL3-201ENST00000003912 TROQ12816 1431 aaPredicted RBP13.2□□□□□ -0.3
NIPAL3-201ENST00000003912 PANK3Q9H999 370 aa13.19□□□□□ -0.3
NIPAL3-201ENST00000003912 USP47Q96K76 1375 aa13.18□□□□□ -0.3
NIPAL3-201ENST00000003912 CDK11BP21127 795 aaKnown RBP13.18□□□□□ -0.3
NIPAL3-201ENST00000003912 HECW1Q76N89 1606 aa13.18□□□□□ -0.3
NIPAL3-201ENST00000003912 CFAP44Q96MT7 982 aa13.17□□□□□ -0.3
NIPAL3-201ENST00000003912 POGZQ7Z3K3 1410 aa13.17□□□□□ -0.3
NIPAL3-201ENST00000003912 EHBP1L1Q8N3D4 1523 aa13.17□□□□□ -0.3
NIPAL3-201ENST00000003912 ARAP1Q96P48 1450 aa13.17□□□□□ -0.3
NIPAL3-201ENST00000003912 CENPJQ9HC77 1338 aaPredicted RBP13.17□□□□□ -0.3
NIPAL3-201ENST00000003912 C1orf141Q5JVX7 400 aa13.16□□□□□ -0.3
NIPAL3-201ENST00000003912 MEX3CQ5U5Q3 659 aaKnown RBP13.16□□□□□ -0.3
NIPAL3-201ENST00000003912 MAGI1Q96QZ7 1491 aaPredicted RBP13.16□□□□□ -0.3
NIPAL3-201ENST00000003912 SCAPERQ9BY12 1400 aa13.16□□□□□ -0.3
NIPAL3-201ENST00000003912 THEMISQ8N1K5 641 aaPredicted RBP13.15□□□□□ -0.3
NIPAL3-201ENST00000003912 TXNDC2Q86VQ3 553 aa13.15□□□□□ -0.3
NIPAL3-201ENST00000003912 ZRSR1Q15695 479 aaKnown RBP13.15□□□□□ -0.3
NIPAL3-201ENST00000003912 MIA2Q96PC5 1412 aa13.14□□□□□ -0.31
NIPAL3-201ENST00000003912 MYBBP1AQ9BQG0 1328 aaKnown RBP13.14□□□□□ -0.31
NIPAL3-201ENST00000003912 ITPRIPQ8IWB1 547 aa13.14□□□□□ -0.31
NIPAL3-201ENST00000003912 RRBP1Q9P2E9 1410 aaKnown RBP13.13□□□□□ -0.31
NIPAL3-201ENST00000003912 CCDC146Q8IYE0 955 aa13.13□□□□□ -0.31
NIPAL3-201ENST00000003912 RCAN3Q9UKA8 241 aa13.13□□□□□ -0.31
NIPAL3-201ENST00000003912 C9orf84Q5VXU9 1444 aa13.13□□□□□ -0.31
NIPAL3-201ENST00000003912 SMC4Q9NTJ3 1288 aa13.13□□□□□ -0.31
NIPAL3-201ENST00000003912 MCCP23508 829 aa13.12□□□□□ -0.31
NIPAL3-201ENST00000003912 TAF7LQ5H9L4 462 aa13.12□□□□□ -0.31
NIPAL3-201ENST00000003912 ANP32EQ9BTT0 268 aa13.12□□□□□ -0.31
NIPAL3-201ENST00000003912 IQGAP2Q13576 1575 aa13.12□□□□□ -0.31
NIPAL3-201ENST00000003912 RAPGEF3O95398 923 aa13.12□□□□□ -0.31
NIPAL3-201ENST00000003912 NAP1L2Q9ULW6 460 aaPredicted RBP13.11□□□□□ -0.31
NIPAL3-201ENST00000003912 GTF2E1P29083 439 aaPredicted RBP13.11□□□□□ -0.31
NIPAL3-201ENST00000003912 PDE3BQ13370 1112 aa13.11□□□□□ -0.31
NIPAL3-201ENST00000003912 SLC52A1Q9NWF4 448 aa13.1□□□□□ -0.31
NIPAL3-201ENST00000003912 CHMP3Q9Y3E7 222 aa13.1□□□□□ -0.31
NIPAL3-201ENST00000003912 GRIN2AQ12879 1464 aa13.1□□□□□ -0.31
NIPAL3-201ENST00000003912 TEFQ10587 303 aa13.1□□□□□ -0.31
NIPAL3-201ENST00000003912 RWDD1Q9H446 243 aaPredicted RBP13.1□□□□□ -0.31
NIPAL3-201ENST00000003912 HMMRO75330 724 aa13.09□□□□□ -0.31
NIPAL3-201ENST00000003912 GORABQ5T7V8 394 aa13.09□□□□□ -0.31
NIPAL3-201ENST00000003912 CUL7Q14999 1698 aa13.09□□□□□ -0.31
NIPAL3-201ENST00000003912 PROSER2Q86WR7 435 aaPredicted RBP13.09□□□□□ -0.31
NIPAL3-201ENST00000003912 APBB1O00213 710 aa13.09□□□□□ -0.31
NIPAL3-201ENST00000003912 HFM1A2PYH4 1435 aa13.09□□□□□ -0.31
NIPAL3-201ENST00000003912 PEG3Q9GZU2 1588 aa13.09□□□□□ -0.31
NIPAL3-201ENST00000003912 NBR1Q14596 966 aa13.08□□□□□ -0.32
NIPAL3-201ENST00000003912 TTC5Q8N0Z6 440 aa13.08□□□□□ -0.32
NIPAL3-201ENST00000003912 DIAPH1O60610 1272 aaKnown RBP13.08□□□□□ -0.32
NIPAL3-201ENST00000003912 SLC4A10Q6U841 1118 aa13.07□□□□□ -0.32
NIPAL3-201ENST00000003912 KIAA1211Q6ZU35 1233 aa13.07□□□□□ -0.32
NIPAL3-201ENST00000003912 G3V3G9 751 aa13.07□□□□□ -0.32
NIPAL3-201ENST00000003912 DCAF8Q5TAQ9 597 aa13.07□□□□□ -0.32
NIPAL3-201ENST00000003912 B4GALNT3Q6L9W6 998 aa13.07□□□□□ -0.32
NIPAL3-201ENST00000003912 GPATCH3Q96I76 525 aa13.07□□□□□ -0.32
NIPAL3-201ENST00000003912 CD109Q6YHK3 1445 aa13.07□□□□□ -0.32
NIPAL3-201ENST00000003912 GPRASP1Q5JY77 1395 aa13.07□□□□□ -0.32
NIPAL3-201ENST00000003912 URB2Q14146 1524 aaKnown RBP13.06□□□□□ -0.32
NIPAL3-201ENST00000003912 TAOK2Q9UL54 1235 aa13.06□□□□□ -0.32
NIPAL3-201ENST00000003912 HSP90AB1P08238 724 aaKnown RBP13.06□□□□□ -0.32
NIPAL3-201ENST00000003912 TMEM132EQ6IEE7 984 aa13.06□□□□□ -0.32
NIPAL3-201ENST00000003912 ANKLE2Q86XL3 938 aa13.06□□□□□ -0.32
NIPAL3-201ENST00000003912 ISY1Q9ULR0 285 aaKnown RBP13.05□□□□□ -0.32
NIPAL3-201ENST00000003912 EPRSP07814 1512 aaKnown RBP13.05□□□□□ -0.32
NIPAL3-201ENST00000003912 PMFBP1Q8TBY8 1022 aa13.05□□□□□ -0.32
NIPAL3-201ENST00000003912 RRP7AQ9Y3A4 280 aaKnown RBP13.04□□□□□ -0.32
NIPAL3-201ENST00000003912 RAPGEF4Q8WZA2 1011 aa13.04□□□□□ -0.32
NIPAL3-201ENST00000003912 CFAP70Q5T0N1 1121 aa13.03□□□□□ -0.32
NIPAL3-201ENST00000003912 CABP2Q9NPB3 220 aa13.03□□□□□ -0.32
NIPAL3-201ENST00000003912 ESCO1Q5FWF5 840 aa13.02□□□□□ -0.32
NIPAL3-201ENST00000003912 ERICH6BQ5W0A0 696 aa13.02□□□□□ -0.32
NIPAL3-201ENST00000003912 NLRP6P59044 892 aa13.02□□□□□ -0.33
NIPAL3-201ENST00000003912 SUPT6HQ7KZ85 1726 aaKnown RBP13.02□□□□□ -0.33
NIPAL3-201ENST00000003912 MSH5O43196 834 aa13.02□□□□□ -0.33
NIPAL3-201ENST00000003912 TIAM1Q13009 1591 aa13.01□□□□□ -0.33
NIPAL3-201ENST00000003912 HSCBQ8IWL3 235 aa13.01□□□□□ -0.33
NIPAL3-201ENST00000003912 SYTL4Q96C24 671 aaPredicted RBP13.01□□□□□ -0.33
NIPAL3-201ENST00000003912 RPGRIP1LQ68CZ1 1315 aa13.01□□□□□ -0.33
NIPAL3-201ENST00000003912 CDK13Q14004 1512 aaKnown RBP13.01□□□□□ -0.33
NIPAL3-201ENST00000003912 NGEFQ8N5V2 710 aa13.01□□□□□ -0.33
NIPAL3-201ENST00000003912 PRKRIP1Q9H875 184 aaPredicted RBP13.01□□□□□ -0.33
NIPAL3-201ENST00000003912 DAPK1P53355 1430 aa13□□□□□ -0.33
NIPAL3-201ENST00000003912 KIAA1107Q9UPP5 1409 aa13□□□□□ -0.33
NIPAL3-201ENST00000003912 E9PSI1 815 aa13□□□□□ -0.33
NIPAL3-201ENST00000003912 ZNF608Q9ULD9 1512 aaPredicted RBP13□□□□□ -0.33
NIPAL3-201ENST00000003912 CLUAP1Q96AJ1 413 aa13□□□□□ -0.33
NIPAL3-201ENST00000003912 NLRP2Q9NX02 1062 aa13□□□□□ -0.33
NIPAL3-201ENST00000003912 NEXNQ0ZGT2 675 aa12.99□□□□□ -0.33
NIPAL3-201ENST00000003912 TULP1O00294 542 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms