RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 RalgapbQ8BQZ4 1484 aa14.11□□□□□ -0.15
Cpsf3-211ENSMUST00000222968 Cdk13Q69ZA1 1511 aaKnown RBP14.11□□□□□ -0.15
Cpsf3-211ENSMUST00000222968 Rrp7aQ9D1C9 280 aaKnown RBP14.11□□□□□ -0.15
Cpsf3-211ENSMUST00000222968 Polr3aB2RXC6 1390 aa14.1□□□□□ -0.15
Cpsf3-211ENSMUST00000222968 Kidins220E9Q9B7 1793 aa14.1□□□□□ -0.15
Cpsf3-211ENSMUST00000222968 Gm13695A2AK44 830 aa14.1□□□□□ -0.15
Cpsf3-211ENSMUST00000222968 Prdm16A2A935 1275 aa14.09□□□□□ -0.15
Cpsf3-211ENSMUST00000222968 Rundc1Q0VDN7 615 aa14.09□□□□□ -0.15
Cpsf3-211ENSMUST00000222968 Atp7aQ64430 1491 aa14.08□□□□□ -0.15
Cpsf3-211ENSMUST00000222968 Igf1rQ60751 1373 aa14.08□□□□□ -0.16
Cpsf3-211ENSMUST00000222968 Ppip5k1A2ARP1 1436 aa14.08□□□□□ -0.16
Cpsf3-211ENSMUST00000222968 Cd109Q8R422 1442 aa14.08□□□□□ -0.16
Cpsf3-211ENSMUST00000222968 AI481877A2ALV5 1481 aa14.07□□□□□ -0.16
Cpsf3-211ENSMUST00000222968 Abca17E9PX95 1733 aa14.06□□□□□ -0.16
Cpsf3-211ENSMUST00000222968 Pabpn1Q8CCS6 302 aaKnown RBP14.06□□□□□ -0.16
Cpsf3-211ENSMUST00000222968 Znf608Q56A10 1511 aa14.06□□□□□ -0.16
Cpsf3-211ENSMUST00000222968 Tarbp1E9Q368 1579 aa14.06□□□□□ -0.16
Cpsf3-211ENSMUST00000222968 Card11Q8CIS0 1159 aa14.05□□□□□ -0.16
Cpsf3-211ENSMUST00000222968 Washc2Q6PGL7 1334 aa14.04□□□□□ -0.16
Cpsf3-211ENSMUST00000222968 Spag9Q58A65 1321 aaKnown RBP14.03□□□□□ -0.16
Cpsf3-211ENSMUST00000222968 ShprhQ7TPQ3 1674 aa14.03□□□□□ -0.16
Cpsf3-211ENSMUST00000222968 Ythdc2B2RR83 1445 aaKnown RBP14.02□□□□□ -0.16
Cpsf3-211ENSMUST00000222968 Cep170Q6A065 1588 aa14.02□□□□□ -0.16
Cpsf3-211ENSMUST00000222968 Gapvd1Q6PAR5 1458 aa14.02□□□□□ -0.17
Cpsf3-211ENSMUST00000222968 Rock2P70336 1388 aa14.02□□□□□ -0.17
Cpsf3-211ENSMUST00000222968 Grwd1Q810D6 446 aaKnown RBP14.01□□□□□ -0.17
Cpsf3-211ENSMUST00000222968 Pelp1Q9DBD5 1123 aaKnown RBP14.01□□□□□ -0.17
Cpsf3-211ENSMUST00000222968 Kif1bQ60575 1816 aaKnown RBP14.01□□□□□ -0.17
Cpsf3-211ENSMUST00000222968 Zfyve16Q80U44 1528 aa14.01□□□□□ -0.17
Cpsf3-211ENSMUST00000222968 Xrn1P97789 1719 aaKnown RBP14.01□□□□□ -0.17
Cpsf3-211ENSMUST00000222968 Usp54Q8BL06 1588 aaKnown RBP14.01□□□□□ -0.17
Cpsf3-211ENSMUST00000222968 Slc4a2P13808 1237 aaKnown RBP14.01□□□□□ -0.17
Cpsf3-211ENSMUST00000222968 Setd1aE9PYH6 1716 aa14.01□□□□□ -0.17
Cpsf3-211ENSMUST00000222968 Adamts13Q769J6 1426 aa14.01□□□□□ -0.17
Cpsf3-211ENSMUST00000222968 Col17a1Q07563 1470 aa14□□□□□ -0.17
Cpsf3-211ENSMUST00000222968 PnisrA2AJT4 805 aaKnown RBP14□□□□□ -0.17
Cpsf3-211ENSMUST00000222968 PtprtQ99M80 1454 aa14□□□□□ -0.17
Cpsf3-211ENSMUST00000222968 Pde4cQ3UEI1 686 aa13.99□□□□□ -0.17
Cpsf3-211ENSMUST00000222968 Mrs2Q5NCE8 434 aa13.99□□□□□ -0.17
Cpsf3-211ENSMUST00000222968 Exoc6Q8R313 802 aa13.99□□□□□ -0.17
Cpsf3-211ENSMUST00000222968 Edc4Q3UJB9 1406 aaKnown RBP13.99□□□□□ -0.17
Cpsf3-211ENSMUST00000222968 Abca9Q8K449 1623 aa13.99□□□□□ -0.17
Cpsf3-211ENSMUST00000222968 Map3k5O35099 1380 aa13.99□□□□□ -0.17
Cpsf3-211ENSMUST00000222968 Tubgcp6G5E8P0 1769 aa13.98□□□□□ -0.17
Cpsf3-211ENSMUST00000222968 Wwc2Q6NXJ0 1187 aa13.98□□□□□ -0.17
Cpsf3-211ENSMUST00000222968 Zbtb7cQ8VCZ7 619 aa13.95□□□□□ -0.18
Cpsf3-211ENSMUST00000222968 Nos1Q9Z0J4 1429 aa13.95□□□□□ -0.18
Cpsf3-211ENSMUST00000222968 Kdm5cP41230 1554 aa13.95□□□□□ -0.18
Cpsf3-211ENSMUST00000222968 Nsd2Q8BVE8 1365 aa13.95□□□□□ -0.18
Cpsf3-211ENSMUST00000222968 Myo5cE9Q1F5 1742 aa13.95□□□□□ -0.18
Cpsf3-211ENSMUST00000222968 SafbD3YXK2 937 aaKnown RBP13.93□□□□□ -0.18
Cpsf3-211ENSMUST00000222968 Gm38655A0A286YDK6 273 aa13.93□□□□□ -0.18
Cpsf3-211ENSMUST00000222968 Tulp4Q9JIL5 1547 aa13.92□□□□□ -0.18
Cpsf3-211ENSMUST00000222968 Fndc1E9Q043 1732 aa13.92□□□□□ -0.18
Cpsf3-211ENSMUST00000222968 Tmem131lQ3U3D7 1597 aa13.92□□□□□ -0.18
Cpsf3-211ENSMUST00000222968 CenpbP27790 599 aa13.91□□□□□ -0.18
Cpsf3-211ENSMUST00000222968 Ylpm1Q9R0I7 1386 aaKnown RBP13.9□□□□□ -0.18
Cpsf3-211ENSMUST00000222968 Uggt2E9Q4X2 1504 aa13.9□□□□□ -0.18
Cpsf3-211ENSMUST00000222968 Slc24a1Q91WD8 1130 aa13.9□□□□□ -0.18
Cpsf3-211ENSMUST00000222968 Hdac5Q9Z2V6 1113 aa13.9□□□□□ -0.18
Cpsf3-211ENSMUST00000222968 Znf518aB2RRF6 1478 aaKnown RBP13.88□□□□□ -0.19
Cpsf3-211ENSMUST00000222968 NrdcQ8BHG1 1161 aa13.88□□□□□ -0.19
Cpsf3-211ENSMUST00000222968 AnkarA2RT91 1465 aa13.88□□□□□ -0.19
Cpsf3-211ENSMUST00000222968 Ifit1bl1D3Z6F0 470 aa13.87□□□□□ -0.19
Cpsf3-211ENSMUST00000222968 Adgrl3Q80TS3 1537 aa13.87□□□□□ -0.19
Cpsf3-211ENSMUST00000222968 Abcc6Q9R1S7 1498 aa13.87□□□□□ -0.19
Cpsf3-211ENSMUST00000222968 Topbp1Q6ZQF0 1515 aa13.85□□□□□ -0.19
Cpsf3-211ENSMUST00000222968 Calr4Q3TQS0 420 aa13.85□□□□□ -0.19
Cpsf3-211ENSMUST00000222968 Ifnlr1Q8CGK5 535 aa13.85□□□□□ -0.19
Cpsf3-211ENSMUST00000222968 Abca6Q8K441 1624 aa13.85□□□□□ -0.19
Cpsf3-211ENSMUST00000222968 Mroh3A0A1D5RM54 893 aa13.84□□□□□ -0.19
Cpsf3-211ENSMUST00000222968 Lemd3Q9WU40 921 aa13.84□□□□□ -0.19
Cpsf3-211ENSMUST00000222968 Pola1P33609 1465 aa13.83□□□□□ -0.2
Cpsf3-211ENSMUST00000222968 Iqgap3F8VQ29 1632 aa13.83□□□□□ -0.2
Cpsf3-211ENSMUST00000222968 Dnajc5P60904 198 aa13.82□□□□□ -0.2
Cpsf3-211ENSMUST00000222968 Kif3bQ61771 747 aa13.82□□□□□ -0.2
Cpsf3-211ENSMUST00000222968 Plch2A2AP18 1501 aa13.82□□□□□ -0.2
Cpsf3-211ENSMUST00000222968 Abca8aQ8K442 1620 aa13.82□□□□□ -0.2
Cpsf3-211ENSMUST00000222968 Arid3cA6PWV5 409 aa13.82□□□□□ -0.2
Cpsf3-211ENSMUST00000222968 Gm156Q58A37 223 aa13.82□□□□□ -0.2
Cpsf3-211ENSMUST00000222968 Ttc21bQ0HA38 1315 aa13.81□□□□□ -0.2
Cpsf3-211ENSMUST00000222968 Sbno1Q689Z5 1390 aa13.81□□□□□ -0.2
Cpsf3-211ENSMUST00000222968 Ak9G3UYQ4 1894 aa13.81□□□□□ -0.2
Cpsf3-211ENSMUST00000222968 Zmym4A2A791 1549 aaKnown RBP13.8□□□□□ -0.2
Cpsf3-211ENSMUST00000222968 Atp10aO54827 1508 aa13.8□□□□□ -0.2
Cpsf3-211ENSMUST00000222968 Trpm1Q2TV84 1622 aa13.8□□□□□ -0.2
Cpsf3-211ENSMUST00000222968 Prex1Q69ZK0 1650 aa13.8□□□□□ -0.2
Cpsf3-211ENSMUST00000222968 Cep152A2AUM9 1736 aaKnown RBP13.8□□□□□ -0.2
Cpsf3-211ENSMUST00000222968 PrxO55103 1391 aa13.8□□□□□ -0.2
Cpsf3-211ENSMUST00000222968 Sall3Q62255 1320 aa13.79□□□□□ -0.2
Cpsf3-211ENSMUST00000222968 AglF8VPN4 1532 aa13.79□□□□□ -0.2
Cpsf3-211ENSMUST00000222968 OvosQ3UU35 1456 aa13.79□□□□□ -0.2
Cpsf3-211ENSMUST00000222968 Depdc5P61460 1591 aa13.78□□□□□ -0.2
Cpsf3-211ENSMUST00000222968 Rims1Q99NE5 1463 aa13.77□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Rpgrip1lQ8CG73 1264 aa13.76□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Pank3Q8R2W9 370 aa13.76□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Itsn2Q9Z0R6 1659 aa13.75□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Adgrb3Q80ZF8 1522 aa13.75□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Prdm2A2A7B5 1709 aaKnown RBP13.75□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Ehbp1l1Q99MS7 1716 aa13.75□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 11.4 ms