RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Hdgfl1Q2VPR5 283 aa11.61□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Gtf3c3Q3TMP1 882 aa11.61□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Zfp644E9QA22 1323 aa11.61□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Shroom4Q1W617 1475 aa11.61□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Ksr2Q3UVC0 959 aa11.6□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Chrna2Q91X60 512 aa11.6□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Esx1O88933 382 aa11.59□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Naip1Q9QWK5 1403 aa11.59□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Cux1P53564 1515 aa11.59□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Paf1Q8K2T8 535 aa11.59□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Znf704Q9ERQ3 566 aa11.59□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Arhgef5E9Q7D5 1581 aa11.58□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Arid3cA6PWV5 409 aa11.58□□□□□ -0.56
Scn8a-213ENSMUST00000201549 Slc4a2P13808 1237 aaKnown RBP11.58□□□□□ -0.56
Scn8a-213ENSMUST00000201549 Rpgrip1lQ8CG73 1264 aa11.58□□□□□ -0.56
Scn8a-213ENSMUST00000201549 LrpprcQ6PB66 1392 aaKnown RBP11.58□□□□□ -0.56
Scn8a-213ENSMUST00000201549 GorabQ8BRM2 368 aa11.57□□□□□ -0.56
Scn8a-213ENSMUST00000201549 Hsp90b1P08113 802 aaKnown RBP11.57□□□□□ -0.56
Scn8a-213ENSMUST00000201549 Kcnh8P59111 1102 aa11.57□□□□□ -0.56
Scn8a-213ENSMUST00000201549 Vps8Q0P5W1 1427 aa11.57□□□□□ -0.56
Scn8a-213ENSMUST00000201549 Fan1Q69ZT1 1020 aa11.56□□□□□ -0.56
Scn8a-213ENSMUST00000201549 Gpatch11Q3UFS4 262 aa11.56□□□□□ -0.56
Scn8a-213ENSMUST00000201549 Sart3Q9JLI8 962 aaKnown RBP11.55□□□□□ -0.56
Scn8a-213ENSMUST00000201549 WrnO09053 1401 aa11.55□□□□□ -0.56
Scn8a-213ENSMUST00000201549 Chmp4bQ9D8B3 224 aaKnown RBP11.55□□□□□ -0.56
Scn8a-213ENSMUST00000201549 Birc3O08863 600 aa11.54□□□□□ -0.56
Scn8a-213ENSMUST00000201549 Phldb1Q6PDH0 1371 aaKnown RBP11.54□□□□□ -0.56
Scn8a-213ENSMUST00000201549 Tiam1Q60610 1591 aa11.54□□□□□ -0.56
Scn8a-213ENSMUST00000201549 Casc1Q6TDU8 730 aa11.54□□□□□ -0.56
Scn8a-213ENSMUST00000201549 Fam193aQ8CGI1 1231 aaKnown RBP11.54□□□□□ -0.56
Scn8a-213ENSMUST00000201549 TimelessQ9R1X4 1197 aa11.54□□□□□ -0.56
Scn8a-213ENSMUST00000201549 Kif3bQ61771 747 aa11.53□□□□□ -0.56
Scn8a-213ENSMUST00000201549 Iqcf3Q9D498 203 aa11.53□□□□□ -0.56
Scn8a-213ENSMUST00000201549 Rock1P70335 1354 aa11.53□□□□□ -0.56
Scn8a-213ENSMUST00000201549 Eif2s2Q99L45 331 aaKnown RBP11.53□□□□□ -0.56
Scn8a-213ENSMUST00000201549 Sart1Q9Z315 806 aaKnown RBP11.53□□□□□ -0.56
Scn8a-213ENSMUST00000201549 BbxQ8VBW5 907 aa11.52□□□□□ -0.56
Scn8a-213ENSMUST00000201549 PtprkP35822 1457 aa11.52□□□□□ -0.56
Scn8a-213ENSMUST00000201549 Dhx57Q6P5D3 1388 aaKnown RBP11.52□□□□□ -0.57
Scn8a-213ENSMUST00000201549 PnisrA2AJT4 805 aaKnown RBP11.51□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Polr1aO35134 1717 aaKnown RBP11.51□□□□□ -0.57
Scn8a-213ENSMUST00000201549 SlkO54988 1233 aa11.51□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Ccdc96Q9CR92 584 aa11.51□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Cc2d2bA0A286YDU8 1405 aa11.5□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Q7TT23 1179 aa11.5□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Rad54l2Q99NG0 1466 aa11.5□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Ak7Q9D2H2 614 aa11.5□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Dhx29Q6PGC1 1365 aaKnown RBP11.5□□□□□ -0.57
Scn8a-213ENSMUST00000201549 CgnP59242 1191 aa11.5□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Ccar1Q8CH18 1146 aaKnown RBP11.5□□□□□ -0.57
Scn8a-213ENSMUST00000201549 4933402E13RikQ9D4D2 429 aa11.49□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Zscan10Q3URR7 782 aa11.49□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Kif7B7ZNG0 1348 aa11.49□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Tdrd9Q14BI7 1383 aa11.48□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Pibf1E9Q6K3 756 aa11.48□□□□□ -0.57
Scn8a-213ENSMUST00000201549 HnrnpuQ8VEK3 800 aaKnown RBP11.48□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Mre11Q61216 706 aa11.48□□□□□ -0.57
Scn8a-213ENSMUST00000201549 CrebrfQ8CDG5 640 aaKnown RBP11.48□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Tsen2Q6P7W5 460 aa11.48□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Ciz1Q8VEH2 845 aa11.48□□□□□ -0.57
Scn8a-213ENSMUST00000201549 MccE9PWI3 1003 aa11.47□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Ttll13A4Q9F6 804 aa11.47□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Sox12Q04890 314 aa11.47□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Ift140E9PY46 1464 aa11.47□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Usp40Q8BWR4 1235 aa11.46□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Tomm22Q9CPQ3 142 aa11.46□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Lemd3Q9WU40 921 aa11.46□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Ylpm1Q9R0I7 1386 aaKnown RBP11.46□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Fam184bQ0KK56 942 aa11.46□□□□□ -0.57
Scn8a-213ENSMUST00000201549 Rtf1A2AQ19 715 aaKnown RBP11.46□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Wdr78E9PYY5 807 aa11.46□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Znf771Q8BJ90 317 aa11.46□□□□□ -0.58
Scn8a-213ENSMUST00000201549 NrkQ9R0G8 1455 aa11.45□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Plcd4Q8K3R3 807 aa11.45□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Pank1Q8K4K6 548 aa11.45□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Pcf11G3X9Z4 1553 aa11.45□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Mroh2bQ7M6Y6 1581 aa11.45□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Prkrip1Q9CWV6 186 aaKnown RBP11.45□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Washc2Q6PGL7 1334 aa11.44□□□□□ -0.58
Scn8a-213ENSMUST00000201549 HdgfP51859 237 aaKnown RBP11.44□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Rfx1P48377 963 aa11.44□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Ccdc146E9Q9F7 977 aa11.44□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Zfp444Q3TDV8 331 aaKnown RBP11.44□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Ccdc30Q8BVF4 654 aa11.43□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Fbxo2Q80UW2 297 aa11.43□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Ccdc60Q8C4J0 545 aa11.43□□□□□ -0.58
Scn8a-213ENSMUST00000201549 GsdmaQ9EST1 446 aa11.43□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Kif16bB1AVY7 1312 aa11.42□□□□□ -0.58
Scn8a-213ENSMUST00000201549 MsnP26041 577 aaKnown RBP11.42□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Grin2bQ01097 1482 aa11.42□□□□□ -0.58
Scn8a-213ENSMUST00000201549 KarsQ99MN1 595 aaKnown RBP11.42□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Spag9Q58A65 1321 aaKnown RBP11.42□□□□□ -0.58
Scn8a-213ENSMUST00000201549 TchhA0A0B4J1F9 1599 aa11.42□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Efcab5A0JP43 1406 aa11.41□□□□□ -0.58
Scn8a-213ENSMUST00000201549 SetQ9EQU5 289 aaKnown RBP11.41□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Dhx9O70133 1380 aaKnown RBP11.41□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Duox2A2AQ99 1517 aa11.41□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Rrp12Q6P5B0 1295 aaKnown RBP11.41□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Plagl1Q9JLQ4 704 aa11.41□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Q3TQI7 289 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 173 ms