RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Upf2A2AT37 1269 aaKnown RBP23.17■■□□□ 1.3
Ckap4-202ENSMUST00000167671 Rock2P70336 1388 aa23.17■■□□□ 1.3
Ckap4-202ENSMUST00000167671 Mak16Q8BGS0 296 aaKnown RBP23.15■■□□□ 1.3
Ckap4-202ENSMUST00000167671 Abcc2Q8VI47 1543 aa23.14■■□□□ 1.3
Ckap4-202ENSMUST00000167671 Ccdc141E9Q8Q6 1531 aa23.13■■□□□ 1.29
Ckap4-202ENSMUST00000167671 Trpm2Q91YD4 1506 aa23.13■■□□□ 1.29
Ckap4-202ENSMUST00000167671 ChgaP26339 463 aaKnown RBP23.12■■□□□ 1.29
Ckap4-202ENSMUST00000167671 Nup160Q9Z0W3 1402 aaKnown RBP23.12■■□□□ 1.29
Ckap4-202ENSMUST00000167671 Cpsf1Q9EPU4 1441 aaKnown RBP23.1■■□□□ 1.29
Ckap4-202ENSMUST00000167671 Polr3aB2RXC6 1390 aa23.1■■□□□ 1.29
Ckap4-202ENSMUST00000167671 Mroh2aD3Z750 1679 aa23.1■■□□□ 1.29
Ckap4-202ENSMUST00000167671 Fam163aQ8CAA5 168 aa23.1■■□□□ 1.29
Ckap4-202ENSMUST00000167671 Asxl1P59598 1514 aa23.08■■□□□ 1.29
Ckap4-202ENSMUST00000167671 Mapkbp1Q6NS57 1503 aa23.08■■□□□ 1.28
Ckap4-202ENSMUST00000167671 DroshaQ5HZJ0 1373 aaKnown RBP23.08■■□□□ 1.28
Ckap4-202ENSMUST00000167671 Rrp7aQ9D1C9 280 aaKnown RBP23.08■■□□□ 1.28
Ckap4-202ENSMUST00000167671 Dot1lQ6XZL8 1540 aa23.06■■□□□ 1.28
Ckap4-202ENSMUST00000167671 Pank3Q8R2W9 370 aa23.06■■□□□ 1.28
Ckap4-202ENSMUST00000167671 Prkrip1Q9CWV6 186 aaKnown RBP23.06■■□□□ 1.28
Ckap4-202ENSMUST00000167671 Inpp5dQ9ES52 1191 aa23.04■■□□□ 1.28
Ckap4-202ENSMUST00000167671 Mlh3A0A1Y7VMP7 1443 aa23.04■■□□□ 1.28
Ckap4-202ENSMUST00000167671 Ifit1bl1D3Z6F0 470 aa23.02■■□□□ 1.28
Ckap4-202ENSMUST00000167671 Iqgap1Q9JKF1 1657 aaKnown RBP23.02■■□□□ 1.28
Ckap4-202ENSMUST00000167671 B4galnt3Q6L8S8 986 aa23.02■■□□□ 1.28
Ckap4-202ENSMUST00000167671 Hsp90aa1P07901 733 aaKnown RBP23.01■■□□□ 1.27
Ckap4-202ENSMUST00000167671 Hdac5Q9Z2V6 1113 aa23.01■■□□□ 1.27
Ckap4-202ENSMUST00000167671 Iqcf3Q9D498 203 aa22.99■■□□□ 1.27
Ckap4-202ENSMUST00000167671 Esx1O88933 382 aa22.99■■□□□ 1.27
Ckap4-202ENSMUST00000167671 Pbrm1Q8BSQ9 1634 aaKnown RBP22.98■■□□□ 1.27
Ckap4-202ENSMUST00000167671 PrxO55103 1391 aa22.98■■□□□ 1.27
Ckap4-202ENSMUST00000167671 Caskin1Q6P9K8 1431 aa22.98■■□□□ 1.27
Ckap4-202ENSMUST00000167671 Ttll13A4Q9F6 804 aa22.98■■□□□ 1.27
Ckap4-202ENSMUST00000167671 Kdm5cP41230 1554 aa22.97■■□□□ 1.27
Ckap4-202ENSMUST00000167671 Mink1Q9JM52 1308 aa22.97■■□□□ 1.27
Ckap4-202ENSMUST00000167671 Ak9G3UYQ4 1894 aa22.97■■□□□ 1.27
Ckap4-202ENSMUST00000167671 CrbnQ8C7D2 445 aa22.96■■□□□ 1.27
Ckap4-202ENSMUST00000167671 Ssh2Q5SW75 1423 aa22.96■■□□□ 1.27
Ckap4-202ENSMUST00000167671 Zmym4A2A791 1549 aaKnown RBP22.96■■□□□ 1.27
Ckap4-202ENSMUST00000167671 PtprgQ05909 1442 aa22.96■■□□□ 1.27
Ckap4-202ENSMUST00000167671 Rock1P70335 1354 aa22.96■■□□□ 1.27
Ckap4-202ENSMUST00000167671 Clstn2Q9ER65 966 aa22.95■■□□□ 1.27
Ckap4-202ENSMUST00000167671 Fmn2Q9JL04 1578 aa22.95■■□□□ 1.27
Ckap4-202ENSMUST00000167671 Cd109Q8R422 1442 aa22.95■■□□□ 1.26
Ckap4-202ENSMUST00000167671 Dbr1Q923B1 550 aa22.94■■□□□ 1.26
Ckap4-202ENSMUST00000167671 Atp7aQ64430 1491 aa22.93■■□□□ 1.26
Ckap4-202ENSMUST00000167671 Zscan10Q3URR7 782 aa22.92■■□□□ 1.26
Ckap4-202ENSMUST00000167671 Lrrc9Q8CDN9 1456 aa22.92■■□□□ 1.26
Ckap4-202ENSMUST00000167671 Tarbp1E9Q368 1579 aa22.92■■□□□ 1.26
Ckap4-202ENSMUST00000167671 Dnajc5bQ9CQ94 199 aa22.91■■□□□ 1.26
Ckap4-202ENSMUST00000167671 Tubgcp6G5E8P0 1769 aa22.91■■□□□ 1.26
Ckap4-202ENSMUST00000167671 Apbb1Q9QXJ1 710 aa22.91■■□□□ 1.26
Ckap4-202ENSMUST00000167671 Zcchc11B2RX14 1644 aaKnown RBP22.9■■□□□ 1.26
Ckap4-202ENSMUST00000167671 Gapvd1Q6PAR5 1458 aa22.9■■□□□ 1.26
Ckap4-202ENSMUST00000167671 DaxxO35613 739 aa22.9■■□□□ 1.26
Ckap4-202ENSMUST00000167671 Kif16bB1AVY7 1312 aa22.88■■□□□ 1.25
Ckap4-202ENSMUST00000167671 Jph4Q80WT0 628 aa22.88■■□□□ 1.25
Ckap4-202ENSMUST00000167671 Sart1Q9Z315 806 aaKnown RBP22.88■■□□□ 1.25
Ckap4-202ENSMUST00000167671 CanxP35564 591 aaKnown RBP22.87■■□□□ 1.25
Ckap4-202ENSMUST00000167671 4933416C03RikQ3V063 378 aa22.86■■□□□ 1.25
Ckap4-202ENSMUST00000167671 Setd1aE9PYH6 1716 aa22.86■■□□□ 1.25
Ckap4-202ENSMUST00000167671 Tmf1B9EKI3 1091 aa22.86■■□□□ 1.25
Ckap4-202ENSMUST00000167671 Slc4a1apE9PX68 744 aa22.86■■□□□ 1.25
Ckap4-202ENSMUST00000167671 Neo1P97798 1493 aa22.86■■□□□ 1.25
Ckap4-202ENSMUST00000167671 Eif4g3Q80XI3 1579 aaKnown RBP22.86■■□□□ 1.25
Ckap4-202ENSMUST00000167671 TnikP83510 1323 aa22.86■■□□□ 1.25
Ckap4-202ENSMUST00000167671 Mroh3A0A1D5RM54 893 aa22.85■■□□□ 1.25
Ckap4-202ENSMUST00000167671 Trappc8E9PWG2 1437 aa22.85■■□□□ 1.25
Ckap4-202ENSMUST00000167671 Erich6D3Z6S9 713 aa22.85■■□□□ 1.25
Ckap4-202ENSMUST00000167671 Adgrl2Q8JZZ7 1487 aa22.84■■□□□ 1.25
Ckap4-202ENSMUST00000167671 Plch2A2AP18 1501 aa22.83■■□□□ 1.25
Ckap4-202ENSMUST00000167671 Arhgap5P97393 1501 aa22.83■■□□□ 1.25
Ckap4-202ENSMUST00000167671 Kdm2aP59997 1161 aa22.83■■□□□ 1.25
Ckap4-202ENSMUST00000167671 Ppp2r1aQ76MZ3 589 aa22.81■■□□□ 1.24
Ckap4-202ENSMUST00000167671 Rwdd1Q9CQK7 243 aa22.8■■□□□ 1.24
Ckap4-202ENSMUST00000167671 Ccdc9Q8VC31 543 aaKnown RBP22.79■■□□□ 1.24
Ckap4-202ENSMUST00000167671 Tex14Q7M6U3 1450 aa22.79■■□□□ 1.24
Ckap4-202ENSMUST00000167671 Fancd2Q80V62 1450 aa22.79■■□□□ 1.24
Ckap4-202ENSMUST00000167671 Neurod2Q62414 383 aa22.78■■□□□ 1.24
Ckap4-202ENSMUST00000167671 Fam208aQ69ZR9 1610 aaKnown RBP22.78■■□□□ 1.24
Ckap4-202ENSMUST00000167671 Mbd3Q9Z2D8 285 aaKnown RBP22.78■■□□□ 1.24
Ckap4-202ENSMUST00000167671 AknaQ80VW7 1404 aa22.77■■□□□ 1.24
Ckap4-202ENSMUST00000167671 Nkx1-2P42580 305 aa22.77■■□□□ 1.24
Ckap4-202ENSMUST00000167671 Sart3Q9JLI8 962 aaKnown RBP22.77■■□□□ 1.23
Ckap4-202ENSMUST00000167671 Gtf3c3Q3TMP1 882 aa22.76■■□□□ 1.23
Ckap4-202ENSMUST00000167671 Chmp5Q9D7S9 219 aa22.76■■□□□ 1.23
Ckap4-202ENSMUST00000167671 EspnQ9ET47 871 aa22.75■■□□□ 1.23
Ckap4-202ENSMUST00000167671 Srcin1Q9QWI6 1250 aa22.75■■□□□ 1.23
Ckap4-202ENSMUST00000167671 Kdm2bQ6P1G2 1309 aa22.74■■□□□ 1.23
Ckap4-202ENSMUST00000167671 Adamts13Q769J6 1426 aa22.74■■□□□ 1.23
Ckap4-202ENSMUST00000167671 Os9Q8K2C7 672 aa22.74■■□□□ 1.23
Ckap4-202ENSMUST00000167671 Speer4f1Q9D5Q6 258 aa22.74■■□□□ 1.23
Ckap4-202ENSMUST00000167671 Spag9Q58A65 1321 aaKnown RBP22.73■■□□□ 1.23
Ckap4-202ENSMUST00000167671 Irx3P81067 507 aa22.73■■□□□ 1.23
Ckap4-202ENSMUST00000167671 Prdm10Q3UTQ7 1184 aa22.73■■□□□ 1.23
Ckap4-202ENSMUST00000167671 Dnmt1P13864 1620 aaKnown RBP22.72■■□□□ 1.23
Ckap4-202ENSMUST00000167671 Pde4cQ3UEI1 686 aa22.72■■□□□ 1.23
Ckap4-202ENSMUST00000167671 Fam184bQ0KK56 942 aa22.71■■□□□ 1.23
Ckap4-202ENSMUST00000167671 Lrriq1Q0P5X1 1673 aa22.7■■□□□ 1.23
Ckap4-202ENSMUST00000167671 Nlrp6Q91WS2 869 aa22.7■■□□□ 1.22
Ckap4-202ENSMUST00000167671 Arid4bA2CG63 1314 aaKnown RBP22.7■■□□□ 1.22
Retrieved 100 of 22,080 RNA–protein pairs in 6.5 ms