RNA–Protein interactions for RNA: ENSMUST00000101326.9

Ebf1-202, Transcript of Transcription factor COE1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ebf1, Length 3,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1-202ENSMUST00000101326 TnikP83510 1323 aa17.18■□□□□ 0.34
Ebf1-202ENSMUST00000101326 Kdm3bQ6ZPY7 1562 aa17.18■□□□□ 0.34
Ebf1-202ENSMUST00000101326 Pknox2Q8BG99 474 aa17.18■□□□□ 0.34
Ebf1-202ENSMUST00000101326 Lamc1P02468 1607 aaKnown RBP17.17■□□□□ 0.34
Ebf1-202ENSMUST00000101326 Arhgef12Q8R4H2 1543 aaKnown RBP17.17■□□□□ 0.34
Ebf1-202ENSMUST00000101326 Il16O54824 1322 aa17.17■□□□□ 0.34
Ebf1-202ENSMUST00000101326 Pank3Q8R2W9 370 aa17.17■□□□□ 0.34
Ebf1-202ENSMUST00000101326 Map3k4O08648 1597 aa17.16■□□□□ 0.34
Ebf1-202ENSMUST00000101326 Inpp5dQ9ES52 1191 aa17.16■□□□□ 0.34
Ebf1-202ENSMUST00000101326 Supt6hQ62383 1726 aaKnown RBP17.16■□□□□ 0.34
Ebf1-202ENSMUST00000101326 Mre11Q61216 706 aa17.16■□□□□ 0.34
Ebf1-202ENSMUST00000101326 Nup155Q99P88 1391 aaKnown RBP17.16■□□□□ 0.34
Ebf1-202ENSMUST00000101326 RalgapbQ8BQZ4 1484 aa17.15■□□□□ 0.34
Ebf1-202ENSMUST00000101326 Kif21bQ9QXL1 1668 aa17.15■□□□□ 0.34
Ebf1-202ENSMUST00000101326 Mroh3A0A1D5RM54 893 aa17.15■□□□□ 0.34
Ebf1-202ENSMUST00000101326 Eif2s2Q99L45 331 aaKnown RBP17.15■□□□□ 0.34
Ebf1-202ENSMUST00000101326 Trim30dE9PWL0 497 aa17.14■□□□□ 0.33
Ebf1-202ENSMUST00000101326 Map4P27546 1125 aaKnown RBP17.14■□□□□ 0.33
Ebf1-202ENSMUST00000101326 4930567H17RikQ3V0K5 233 aa17.14■□□□□ 0.33
Ebf1-202ENSMUST00000101326 WizO88286 1684 aaKnown RBP17.14■□□□□ 0.33
Ebf1-202ENSMUST00000101326 Kif21aQ9QXL2 1672 aa17.14■□□□□ 0.33
Ebf1-202ENSMUST00000101326 Ppm1gQ61074 542 aa17.13■□□□□ 0.33
Ebf1-202ENSMUST00000101326 Rwdd1Q9CQK7 243 aa17.12■□□□□ 0.33
Ebf1-202ENSMUST00000101326 Kif16bB1AVY7 1312 aa17.12■□□□□ 0.33
Ebf1-202ENSMUST00000101326 Kdm2bQ6P1G2 1309 aa17.12■□□□□ 0.33
Ebf1-202ENSMUST00000101326 Mbd3Q9Z2D8 285 aaKnown RBP17.12■□□□□ 0.33
Ebf1-202ENSMUST00000101326 Adcy10Q8C0T9 1614 aa17.11■□□□□ 0.33
Ebf1-202ENSMUST00000101326 Zmym4A2A791 1549 aaKnown RBP17.1■□□□□ 0.33
Ebf1-202ENSMUST00000101326 Rock1P70335 1354 aa17.09■□□□□ 0.33
Ebf1-202ENSMUST00000101326 Hsp90ab1P11499 724 aaKnown RBP17.09■□□□□ 0.33
Ebf1-202ENSMUST00000101326 Cc2d2bA0A286YDU8 1405 aa17.09■□□□□ 0.33
Ebf1-202ENSMUST00000101326 PxdnQ3UQ28 1475 aa17.09■□□□□ 0.33
Ebf1-202ENSMUST00000101326 Magi3Q9EQJ9 1476 aa17.09■□□□□ 0.33
Ebf1-202ENSMUST00000101326 Plb1Q3TTY0 1478 aa17.08■□□□□ 0.33
Ebf1-202ENSMUST00000101326 Neurod2Q62414 383 aa17.08■□□□□ 0.33
Ebf1-202ENSMUST00000101326 PrxO55103 1391 aa17.07■□□□□ 0.32
Ebf1-202ENSMUST00000101326 Dcaf11Q91VU6 549 aa17.07■□□□□ 0.32
Ebf1-202ENSMUST00000101326 Ak7Q9D2H2 614 aa17.07■□□□□ 0.32
Ebf1-202ENSMUST00000101326 Kcnn1Q9EQR3 537 aa17.07■□□□□ 0.32
Ebf1-202ENSMUST00000101326 Grin2aP35436 1464 aa17.06■□□□□ 0.32
Ebf1-202ENSMUST00000101326 Tdrd9Q14BI7 1383 aa17.06■□□□□ 0.32
Ebf1-202ENSMUST00000101326 Spryd3E9Q9B3 442 aa17.05■□□□□ 0.32
Ebf1-202ENSMUST00000101326 Polr3aB2RXC6 1390 aa17.05■□□□□ 0.32
Ebf1-202ENSMUST00000101326 Zscan10Q3URR7 782 aa17.05■□□□□ 0.32
Ebf1-202ENSMUST00000101326 Ifit1bl1D3Z6F0 470 aa17.03■□□□□ 0.32
Ebf1-202ENSMUST00000101326 Cpsf1Q9EPU4 1441 aaKnown RBP17.03■□□□□ 0.32
Ebf1-202ENSMUST00000101326 Smc5Q8CG46 1101 aaKnown RBP17.03■□□□□ 0.32
Ebf1-202ENSMUST00000101326 Asxl1P59598 1514 aa17.03■□□□□ 0.32
Ebf1-202ENSMUST00000101326 Speer4f1Q9D5Q6 258 aa17.03■□□□□ 0.32
Ebf1-202ENSMUST00000101326 Gm6268A2A3U9 297 aa17.02■□□□□ 0.32
Ebf1-202ENSMUST00000101326 Ipo8Q7TMY7 1010 aa17.02■□□□□ 0.32
Ebf1-202ENSMUST00000101326 Tspyl2Q7TQI8 677 aa17.01■□□□□ 0.31
Ebf1-202ENSMUST00000101326 Arhgap31A6X8Z5 1425 aa17.01■□□□□ 0.31
Ebf1-202ENSMUST00000101326 Rapgef6Q5NCJ1 1609 aa17.01■□□□□ 0.31
Ebf1-202ENSMUST00000101326 Fkbp15Q6P9Q6 1216 aaKnown RBP17.01■□□□□ 0.31
Ebf1-202ENSMUST00000101326 Znf692Q3U381 531 aa16.99■□□□□ 0.31
Ebf1-202ENSMUST00000101326 Slc4a1apE9PX68 744 aa16.99■□□□□ 0.31
Ebf1-202ENSMUST00000101326 Ppp2r1aQ76MZ3 589 aa16.99■□□□□ 0.31
Ebf1-202ENSMUST00000101326 Armcx1Q9CX83 456 aa16.99■□□□□ 0.31
Ebf1-202ENSMUST00000101326 Adamts12Q811B3 1600 aa16.98■□□□□ 0.31
Ebf1-202ENSMUST00000101326 Plekhh1Q80TI1 1356 aa16.98■□□□□ 0.31
Ebf1-202ENSMUST00000101326 Kdm5cP41230 1554 aa16.97■□□□□ 0.31
Ebf1-202ENSMUST00000101326 Tmf1B9EKI3 1091 aa16.97■□□□□ 0.31
Ebf1-202ENSMUST00000101326 Prdm10Q3UTQ7 1184 aa16.97■□□□□ 0.31
Ebf1-202ENSMUST00000101326 Pdlim2Q8R1G6 349 aa16.96■□□□□ 0.31
Ebf1-202ENSMUST00000101326 Ccdc183A2AJB1 534 aa16.96■□□□□ 0.31
Ebf1-202ENSMUST00000101326 Mapk8ip3Q9ESN9 1337 aa16.95■□□□□ 0.3
Ebf1-202ENSMUST00000101326 Rrp7aQ9D1C9 280 aaKnown RBP16.95■□□□□ 0.3
Ebf1-202ENSMUST00000101326 Pdcl3Q8BVF2 240 aa16.95■□□□□ 0.3
Ebf1-202ENSMUST00000101326 Cdc42bpaQ3UU96 1719 aa16.95■□□□□ 0.3
Ebf1-202ENSMUST00000101326 DroshaQ5HZJ0 1373 aaKnown RBP16.95■□□□□ 0.3
Ebf1-202ENSMUST00000101326 Arhgef11Q68FM7 1552 aa16.95■□□□□ 0.3
Ebf1-202ENSMUST00000101326 Ccdc30Q8BVF4 654 aa16.94■□□□□ 0.3
Ebf1-202ENSMUST00000101326 Ppp1r9bQ6R891 817 aaKnown RBP16.93■□□□□ 0.3
Ebf1-202ENSMUST00000101326 Nlrp6Q91WS2 869 aa16.93■□□□□ 0.3
Ebf1-202ENSMUST00000101326 Dot1lQ6XZL8 1540 aa16.93■□□□□ 0.3
Ebf1-202ENSMUST00000101326 AU015836B2RUM3 263 aa16.93■□□□□ 0.3
Ebf1-202ENSMUST00000101326 Dnttip2Q8R2M2 758 aaKnown RBP16.93■□□□□ 0.3
Ebf1-202ENSMUST00000101326 Pank1Q8K4K6 548 aa16.93■□□□□ 0.3
Ebf1-202ENSMUST00000101326 Tex14Q7M6U3 1450 aa16.92■□□□□ 0.3
Ebf1-202ENSMUST00000101326 Ccdc141E9Q8Q6 1531 aa16.92■□□□□ 0.3
Ebf1-202ENSMUST00000101326 Ttc41Q692V3 1318 aa16.91■□□□□ 0.3
Ebf1-202ENSMUST00000101326 Plch2A2AP18 1501 aa16.91■□□□□ 0.3
Ebf1-202ENSMUST00000101326 Trpm2Q91YD4 1506 aa16.91■□□□□ 0.3
Ebf1-202ENSMUST00000101326 Tarbp1E9Q368 1579 aa16.91■□□□□ 0.3
Ebf1-202ENSMUST00000101326 Gapvd1Q6PAR5 1458 aa16.9■□□□□ 0.3
Ebf1-202ENSMUST00000101326 Kdm2aP59997 1161 aa16.9■□□□□ 0.3
Ebf1-202ENSMUST00000101326 Htatsf1Q8BGC0 757 aa16.9■□□□□ 0.3
Ebf1-202ENSMUST00000101326 Iqgap1Q9JKF1 1657 aaKnown RBP16.9■□□□□ 0.3
Ebf1-202ENSMUST00000101326 Tubgcp6G5E8P0 1769 aa16.9■□□□□ 0.3
Ebf1-202ENSMUST00000101326 Gas2l2Q5SSG4 860 aa16.89■□□□□ 0.29
Ebf1-202ENSMUST00000101326 Polr3glQ8R0C0 218 aa16.89■□□□□ 0.29
Ebf1-202ENSMUST00000101326 Kiaa1551Q5DTW7 1521 aa16.88■□□□□ 0.29
Ebf1-202ENSMUST00000101326 KarsQ99MN1 595 aaKnown RBP16.87■□□□□ 0.29
Ebf1-202ENSMUST00000101326 Rtn4Q99P72 1162 aaKnown RBP16.87■□□□□ 0.29
Ebf1-202ENSMUST00000101326 Arid4bA2CG63 1314 aaKnown RBP16.87■□□□□ 0.29
Ebf1-202ENSMUST00000101326 Rab3gap2Q8BMG7 1366 aa16.87■□□□□ 0.29
Ebf1-202ENSMUST00000101326 Erich6D3Z6S9 713 aa16.87■□□□□ 0.29
Ebf1-202ENSMUST00000101326 Prex2Q3LAC4 1598 aa16.86■□□□□ 0.29
Ebf1-202ENSMUST00000101326 Abca16E9PWJ7 1678 aa16.86■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms