RNA–Protein interactions for RNA: ENSMUST00000042498.13

Hdlbp-201, Transcript of Vigilin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hdlbp, Length 4,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hdlbp-201ENSMUST00000042498 Rad21Q61550 635 aaKnown RBP12.47□□□□□ -0.41
Hdlbp-201ENSMUST00000042498 Exoc6Q8R313 802 aa12.46□□□□□ -0.41
Hdlbp-201ENSMUST00000042498 Kdm3bQ6ZPY7 1562 aa12.46□□□□□ -0.42
Hdlbp-201ENSMUST00000042498 Kiaa1551Q5DTW7 1521 aa12.46□□□□□ -0.42
Hdlbp-201ENSMUST00000042498 OvosQ3UU35 1456 aa12.46□□□□□ -0.42
Hdlbp-201ENSMUST00000042498 Kdm5bQ80Y84 1544 aa12.45□□□□□ -0.42
Hdlbp-201ENSMUST00000042498 AI481877A2ALV5 1481 aa12.45□□□□□ -0.42
Hdlbp-201ENSMUST00000042498 Naip5Q9R016 1403 aa12.45□□□□□ -0.42
Hdlbp-201ENSMUST00000042498 Tmf1B9EKI3 1091 aa12.45□□□□□ -0.42
Hdlbp-201ENSMUST00000042498 Rprd2Q6NXI6 1469 aaKnown RBP12.45□□□□□ -0.42
Hdlbp-201ENSMUST00000042498 Txndc2Q6P902 515 aa12.44□□□□□ -0.42
Hdlbp-201ENSMUST00000042498 Stard8Q8K031 1019 aa12.44□□□□□ -0.42
Hdlbp-201ENSMUST00000042498 Psme1P97371 249 aa12.43□□□□□ -0.42
Hdlbp-201ENSMUST00000042498 Usp40Q8BWR4 1235 aa12.43□□□□□ -0.42
Hdlbp-201ENSMUST00000042498 Ssh2Q5SW75 1423 aa12.43□□□□□ -0.42
Hdlbp-201ENSMUST00000042498 Afap1Q80YS6 731 aa12.42□□□□□ -0.42
Hdlbp-201ENSMUST00000042498 Ttc21bQ0HA38 1315 aa12.42□□□□□ -0.42
Hdlbp-201ENSMUST00000042498 Cfap74Q3UY96 1578 aa12.42□□□□□ -0.42
Hdlbp-201ENSMUST00000042498 Slc4a1apE9PX68 744 aa12.42□□□□□ -0.42
Hdlbp-201ENSMUST00000042498 Smg6P61406 1418 aaKnown RBP12.41□□□□□ -0.42
Hdlbp-201ENSMUST00000042498 Pik3c2gO70167 1506 aa12.41□□□□□ -0.42
Hdlbp-201ENSMUST00000042498 Ofd1Q80Z25 1017 aa12.4□□□□□ -0.42
Hdlbp-201ENSMUST00000042498 Csrnp3P59055 597 aa12.4□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 Arid4bA2CG63 1314 aaKnown RBP12.39□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 Pank3Q8R2W9 370 aa12.39□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 Shq1Q7TMX5 569 aa12.39□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 Mroh2aD3Z750 1679 aa12.39□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 Adgrl2Q8JZZ7 1487 aa12.39□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 Washc2Q6PGL7 1334 aa12.39□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 Setd1bQ8CFT2 1985 aa12.38□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 Utp14aQ640M1 767 aaKnown RBP12.38□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 MlecQ6ZQI3 291 aaKnown RBP12.38□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 Sall3Q62255 1320 aa12.38□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 Znf608Q56A10 1511 aa12.38□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 Kdm6bQ5NCY0 1641 aa12.37□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 PtprtQ99M80 1454 aa12.37□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 Puf60Q3UEB3 564 aaKnown RBP12.36□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 Atp7aQ64430 1491 aa12.36□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 Dcaf11Q91VU6 549 aa12.36□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 Inpp5dQ9ES52 1191 aa12.36□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 Calr4Q3TQS0 420 aa12.36□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 DroshaQ5HZJ0 1373 aaKnown RBP12.36□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 Ylpm1Q9R0I7 1386 aaKnown RBP12.35□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 Polr3glQ8R0C0 218 aa12.35□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 CenpjQ569L8 1344 aa12.34□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 NgefQ8CHT1 710 aa12.34□□□□□ -0.43
Hdlbp-201ENSMUST00000042498 Lrrc9Q8CDN9 1456 aa12.33□□□□□ -0.44
Hdlbp-201ENSMUST00000042498 Cdc42bpaQ3UU96 1719 aa12.33□□□□□ -0.44
Hdlbp-201ENSMUST00000042498 Adgrl3Q80TS3 1537 aa12.33□□□□□ -0.44
Hdlbp-201ENSMUST00000042498 Upf2A2AT37 1269 aaKnown RBP12.33□□□□□ -0.44
Hdlbp-201ENSMUST00000042498 Zscan21Q07231 555 aa12.33□□□□□ -0.44
Hdlbp-201ENSMUST00000042498 Fam184bQ0KK56 942 aa12.32□□□□□ -0.44
Hdlbp-201ENSMUST00000042498 Rock1P70335 1354 aa12.32□□□□□ -0.44
Hdlbp-201ENSMUST00000042498 Fmn2Q9JL04 1578 aa12.32□□□□□ -0.44
Hdlbp-201ENSMUST00000042498 Polr3aB2RXC6 1390 aa12.32□□□□□ -0.44
Hdlbp-201ENSMUST00000042498 AlkP97793 1621 aa12.32□□□□□ -0.44
Hdlbp-201ENSMUST00000042498 Gm38655A0A286YDK6 273 aa12.31□□□□□ -0.44
Hdlbp-201ENSMUST00000042498 Fam208aQ69ZR9 1610 aaKnown RBP12.31□□□□□ -0.44
Hdlbp-201ENSMUST00000042498 Q9D9H8 365 aa12.3□□□□□ -0.44
Hdlbp-201ENSMUST00000042498 Cep170Q6A065 1588 aa12.3□□□□□ -0.44
Hdlbp-201ENSMUST00000042498 Zscan10Q3URR7 782 aa12.3□□□□□ -0.44
Hdlbp-201ENSMUST00000042498 Plekhg5Q66T02 1073 aa12.3□□□□□ -0.44
Hdlbp-201ENSMUST00000042498 PtprgQ05909 1442 aa12.29□□□□□ -0.44
Hdlbp-201ENSMUST00000042498 Mink1Q9JM52 1308 aa12.29□□□□□ -0.44
Hdlbp-201ENSMUST00000042498 Asxl1P59598 1514 aa12.29□□□□□ -0.44
Hdlbp-201ENSMUST00000042498 Znf316Q6PGE4 1016 aa12.28□□□□□ -0.44
Hdlbp-201ENSMUST00000042498 SphkapQ6NSW3 1687 aa12.28□□□□□ -0.44
Hdlbp-201ENSMUST00000042498 Camsap2Q8C1B1 1461 aa12.27□□□□□ -0.45
Hdlbp-201ENSMUST00000042498 Neurod2Q62414 383 aa12.27□□□□□ -0.45
Hdlbp-201ENSMUST00000042498 Dennd4bQ3U1Y4 1499 aa12.26□□□□□ -0.45
Hdlbp-201ENSMUST00000042498 Mak16Q8BGS0 296 aaKnown RBP12.25□□□□□ -0.45
Hdlbp-201ENSMUST00000042498 Ptch1Q61115 1434 aa12.25□□□□□ -0.45
Hdlbp-201ENSMUST00000042498 Ncoa1P70365 1447 aa12.25□□□□□ -0.45
Hdlbp-201ENSMUST00000042498 Kif7B7ZNG0 1348 aa12.23□□□□□ -0.45
Hdlbp-201ENSMUST00000042498 Rangap1P46061 589 aaKnown RBP12.23□□□□□ -0.45
Hdlbp-201ENSMUST00000042498 Slc52a2Q9D8F3 450 aa12.22□□□□□ -0.45
Hdlbp-201ENSMUST00000042498 Rnf17Q99MV7 1640 aa12.22□□□□□ -0.45
Hdlbp-201ENSMUST00000042498 Atp2b2Q9R0K7 1198 aa12.22□□□□□ -0.45
Hdlbp-201ENSMUST00000042498 NhsB1AV60 1647 aa12.22□□□□□ -0.45
Hdlbp-201ENSMUST00000042498 Rpgrip1lQ8CG73 1264 aa12.21□□□□□ -0.45
Hdlbp-201ENSMUST00000042498 Trim26Q99PN3 545 aa12.21□□□□□ -0.45
Hdlbp-201ENSMUST00000042498 Mapk8ip3Q9ESN9 1337 aa12.21□□□□□ -0.45
Hdlbp-201ENSMUST00000042498 Gli2Q0VGT2 1544 aa12.21□□□□□ -0.46
Hdlbp-201ENSMUST00000042498 Sox12Q04890 314 aa12.21□□□□□ -0.46
Hdlbp-201ENSMUST00000042498 Anp32aO35381 247 aa12.21□□□□□ -0.46
Hdlbp-201ENSMUST00000042498 Znf518aB2RRF6 1478 aaKnown RBP12.2□□□□□ -0.46
Hdlbp-201ENSMUST00000042498 Birc3O08863 600 aa12.2□□□□□ -0.46
Hdlbp-201ENSMUST00000042498 Mug2P28666 1451 aa12.2□□□□□ -0.46
Hdlbp-201ENSMUST00000042498 U2af1Q9D883 239 aaKnown RBP12.19□□□□□ -0.46
Hdlbp-201ENSMUST00000042498 Chd1P40201 1711 aa12.19□□□□□ -0.46
Hdlbp-201ENSMUST00000042498 Gsto1O09131 240 aa12.19□□□□□ -0.46
Hdlbp-201ENSMUST00000042498 Slc4a2P13808 1237 aaKnown RBP12.19□□□□□ -0.46
Hdlbp-201ENSMUST00000042498 Aplp2Q06335 707 aa12.19□□□□□ -0.46
Hdlbp-201ENSMUST00000042498 Ppp4r2Q0VGB7 417 aa12.19□□□□□ -0.46
Hdlbp-201ENSMUST00000042498 Golga2Q921M4 999 aa12.18□□□□□ -0.46
Hdlbp-201ENSMUST00000042498 Speer4f1Q9D5Q6 258 aa12.18□□□□□ -0.46
Hdlbp-201ENSMUST00000042498 PnisrA2AJT4 805 aaKnown RBP12.18□□□□□ -0.46
Hdlbp-201ENSMUST00000042498 Fhod3Q76LL6 1578 aa12.18□□□□□ -0.46
Hdlbp-201ENSMUST00000042498 PrxO55103 1391 aa12.18□□□□□ -0.46
Hdlbp-201ENSMUST00000042498 Abca8bQ8K440 1620 aa12.17□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms