RNA–Protein interactions for RNA: ENSMUST00000038421.7

Lsm1-201, Transcript of U6 snRNA-associated Sm-like protein LSm1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lsm1, Length 2,663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1-201ENSMUST00000038421 Cpsf1Q9EPU4 1441 aaKnown RBP22.33■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Ccdc141E9Q8Q6 1531 aa22.32■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Upf2A2AT37 1269 aaKnown RBP22.32■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Anp32bQ9EST5 272 aaKnown RBP22.32■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Q7TT23 1179 aa22.32■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Rad21Q61550 635 aaKnown RBP22.31■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Mapkbp1Q6NS57 1503 aa22.31■■□□□ 1.16
Lsm1-201ENSMUST00000038421 NeflP08551 543 aa22.31■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Fam163aQ8CAA5 168 aa22.31■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Mroh2aD3Z750 1679 aa22.3■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Polr3aB2RXC6 1390 aa22.3■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Mak16Q8BGS0 296 aaKnown RBP22.29■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Asxl1P59598 1514 aa22.28■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Dot1lQ6XZL8 1540 aa22.27■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Mlh3A0A1Y7VMP7 1443 aa22.26■■□□□ 1.15
Lsm1-201ENSMUST00000038421 Pbrm1Q8BSQ9 1634 aaKnown RBP22.26■■□□□ 1.15
Lsm1-201ENSMUST00000038421 Iqgap1Q9JKF1 1657 aaKnown RBP22.25■■□□□ 1.15
Lsm1-201ENSMUST00000038421 Fkbp15Q6P9Q6 1216 aaKnown RBP22.25■■□□□ 1.15
Lsm1-201ENSMUST00000038421 Mink1Q9JM52 1308 aa22.23■■□□□ 1.15
Lsm1-201ENSMUST00000038421 Prkrip1Q9CWV6 186 aaKnown RBP22.23■■□□□ 1.15
Lsm1-201ENSMUST00000038421 ChgaP26339 463 aaKnown RBP22.21■■□□□ 1.15
Lsm1-201ENSMUST00000038421 Caskin1Q6P9K8 1431 aa22.21■■□□□ 1.15
Lsm1-201ENSMUST00000038421 Kdm5cP41230 1554 aa22.19■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Rock1P70335 1354 aa22.18■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Fmn2Q9JL04 1578 aa22.18■■□□□ 1.14
Lsm1-201ENSMUST00000038421 PtprgQ05909 1442 aa22.18■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Pank3Q8R2W9 370 aa22.18■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Tubgcp6G5E8P0 1769 aa22.18■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Rrp7aQ9D1C9 280 aaKnown RBP22.17■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Gapvd1Q6PAR5 1458 aa22.16■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Ak9G3UYQ4 1894 aa22.16■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Inpp5dQ9ES52 1191 aa22.15■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Zmym4A2A791 1549 aaKnown RBP22.15■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Hsp90aa1P07901 733 aaKnown RBP22.14■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Ssh2Q5SW75 1423 aa22.14■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Iqcf3Q9D498 203 aa22.14■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Setd1aE9PYH6 1716 aa22.13■■□□□ 1.13
Lsm1-201ENSMUST00000038421 PrxO55103 1391 aa22.13■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Lrrc9Q8CDN9 1456 aa22.13■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Ifit1bl1D3Z6F0 470 aa22.13■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Clstn2Q9ER65 966 aa22.13■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Hdac5Q9Z2V6 1113 aa22.13■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Tarbp1E9Q368 1579 aa22.12■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Ttll13A4Q9F6 804 aa22.12■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Zcchc11B2RX14 1644 aaKnown RBP22.12■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Cd109Q8R422 1442 aa22.11■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Esx1O88933 382 aa22.1■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Atp7aQ64430 1491 aa22.1■■□□□ 1.13
Lsm1-201ENSMUST00000038421 TnikP83510 1323 aa22.1■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Eif4g3Q80XI3 1579 aaKnown RBP22.09■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Adgrl2Q8JZZ7 1487 aa22.08■■□□□ 1.13
Lsm1-201ENSMUST00000038421 B4galnt3Q6L8S8 986 aa22.08■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Zscan10Q3URR7 782 aa22.06■■□□□ 1.12
Lsm1-201ENSMUST00000038421 CrbnQ8C7D2 445 aa22.06■■□□□ 1.12
Lsm1-201ENSMUST00000038421 Plch2A2AP18 1501 aa22.04■■□□□ 1.12
Lsm1-201ENSMUST00000038421 Jph4Q80WT0 628 aa22.03■■□□□ 1.12
Lsm1-201ENSMUST00000038421 Ccdc9Q8VC31 543 aaKnown RBP22.03■■□□□ 1.12
Lsm1-201ENSMUST00000038421 Kif16bB1AVY7 1312 aa22.02■■□□□ 1.12
Lsm1-201ENSMUST00000038421 Neo1P97798 1493 aa22.02■■□□□ 1.12
Lsm1-201ENSMUST00000038421 Tmf1B9EKI3 1091 aa22.01■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Sart1Q9Z315 806 aaKnown RBP22.01■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Trappc8E9PWG2 1437 aa22.01■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Dnajc5bQ9CQ94 199 aa22■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Tex14Q7M6U3 1450 aa22■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Fam208aQ69ZR9 1610 aaKnown RBP22■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Fancd2Q80V62 1450 aa22■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Dbr1Q923B1 550 aa22■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Arhgap5P97393 1501 aa21.99■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Mroh3A0A1D5RM54 893 aa21.98■■□□□ 1.11
Lsm1-201ENSMUST00000038421 DaxxO35613 739 aa21.98■■□□□ 1.11
Lsm1-201ENSMUST00000038421 CanxP35564 591 aaKnown RBP21.98■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Mbd3Q9Z2D8 285 aaKnown RBP21.98■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Slc4a1apE9PX68 744 aa21.97■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Ppp2r1aQ76MZ3 589 aa21.96■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Dnmt1P13864 1620 aaKnown RBP21.96■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Apbb1Q9QXJ1 710 aa21.95■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Arid4bA2CG63 1314 aaKnown RBP21.95■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Adamts13Q769J6 1426 aa21.95■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Nkx1-2P42580 305 aa21.95■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Rwdd1Q9CQK7 243 aa21.94■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Rrbp1Q99PL5 1605 aaKnown RBP21.94■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Kdm2bQ6P1G2 1309 aa21.93■■□□□ 1.1
Lsm1-201ENSMUST00000038421 4933416C03RikQ3V063 378 aa21.93■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Lrriq1Q0P5X1 1673 aa21.92■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Gm32742A0A1B0GT42 1604 aa21.92■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Ppip5k1A2ARP1 1436 aa21.92■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Kdm2aP59997 1161 aa21.91■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Ttc41Q692V3 1318 aa21.91■■□□□ 1.1
Lsm1-201ENSMUST00000038421 EspnQ9ET47 871 aa21.91■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Gtf3c3Q3TMP1 882 aa21.9■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Chmp5Q9D7S9 219 aa21.9■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Srcin1Q9QWI6 1250 aa21.9■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Erich6D3Z6S9 713 aa21.89■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Spag9Q58A65 1321 aaKnown RBP21.89■■□□□ 1.09
Lsm1-201ENSMUST00000038421 AknaQ80VW7 1404 aa21.89■■□□□ 1.09
Lsm1-201ENSMUST00000038421 Irx3P81067 507 aa21.89■■□□□ 1.09
Lsm1-201ENSMUST00000038421 Sart3Q9JLI8 962 aaKnown RBP21.89■■□□□ 1.09
Lsm1-201ENSMUST00000038421 Mast1Q9R1L5 1570 aa21.89■■□□□ 1.09
Lsm1-201ENSMUST00000038421 Rab3gap2Q8BMG7 1366 aa21.88■■□□□ 1.09
Lsm1-201ENSMUST00000038421 Plekhh1Q80TI1 1356 aa21.88■■□□□ 1.09
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms