RNA–Protein interactions for RNA: ENSMUST00000038421.7

Lsm1-201, Transcript of U6 snRNA-associated Sm-like protein LSm1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lsm1, Length 2,663 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1-201ENSMUST00000038421 Cpsf1Q9EPU4 1441 aaKnown RBP22.33■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Ccdc141E9Q8Q6 1531 aa22.32■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Upf2A2AT37 1269 aaKnown RBP22.32■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Anp32bQ9EST5 272 aaKnown RBP22.32■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Q7TT23 1179 aa22.32■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Rad21Q61550 635 aaKnown RBP22.31■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Mapkbp1Q6NS57 1503 aa22.31■■□□□ 1.16
Lsm1-201ENSMUST00000038421 NeflP08551 543 aa22.31■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Fam163aQ8CAA5 168 aa22.31■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Mroh2aD3Z750 1679 aa22.3■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Polr3aB2RXC6 1390 aa22.3■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Mak16Q8BGS0 296 aaKnown RBP22.29■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Asxl1P59598 1514 aa22.28■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Dot1lQ6XZL8 1540 aa22.27■■□□□ 1.16
Lsm1-201ENSMUST00000038421 Mlh3A0A1Y7VMP7 1443 aa22.26■■□□□ 1.15
Lsm1-201ENSMUST00000038421 Pbrm1Q8BSQ9 1634 aaKnown RBP22.26■■□□□ 1.15
Lsm1-201ENSMUST00000038421 Iqgap1Q9JKF1 1657 aaKnown RBP22.25■■□□□ 1.15
Lsm1-201ENSMUST00000038421 Fkbp15Q6P9Q6 1216 aaKnown RBP22.25■■□□□ 1.15
Lsm1-201ENSMUST00000038421 Mink1Q9JM52 1308 aa22.23■■□□□ 1.15
Lsm1-201ENSMUST00000038421 Prkrip1Q9CWV6 186 aaKnown RBP22.23■■□□□ 1.15
Lsm1-201ENSMUST00000038421 ChgaP26339 463 aaKnown RBP22.21■■□□□ 1.15
Lsm1-201ENSMUST00000038421 Caskin1Q6P9K8 1431 aa22.21■■□□□ 1.15
Lsm1-201ENSMUST00000038421 Kdm5cP41230 1554 aa22.19■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Rock1P70335 1354 aa22.18■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Fmn2Q9JL04 1578 aa22.18■■□□□ 1.14
Lsm1-201ENSMUST00000038421 PtprgQ05909 1442 aa22.18■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Pank3Q8R2W9 370 aa22.18■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Tubgcp6G5E8P0 1769 aa22.18■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Rrp7aQ9D1C9 280 aaKnown RBP22.17■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Gapvd1Q6PAR5 1458 aa22.16■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Ak9G3UYQ4 1894 aa22.16■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Inpp5dQ9ES52 1191 aa22.15■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Zmym4A2A791 1549 aaKnown RBP22.15■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Hsp90aa1P07901 733 aaKnown RBP22.14■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Ssh2Q5SW75 1423 aa22.14■■□□□ 1.14
Lsm1-201ENSMUST00000038421 Iqcf3Q9D498 203 aa22.14■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Setd1aE9PYH6 1716 aa22.13■■□□□ 1.13
Lsm1-201ENSMUST00000038421 PrxO55103 1391 aa22.13■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Lrrc9Q8CDN9 1456 aa22.13■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Ifit1bl1D3Z6F0 470 aa22.13■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Clstn2Q9ER65 966 aa22.13■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Hdac5Q9Z2V6 1113 aa22.13■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Tarbp1E9Q368 1579 aa22.12■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Ttll13A4Q9F6 804 aa22.12■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Zcchc11B2RX14 1644 aaKnown RBP22.12■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Cd109Q8R422 1442 aa22.11■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Esx1O88933 382 aa22.1■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Atp7aQ64430 1491 aa22.1■■□□□ 1.13
Lsm1-201ENSMUST00000038421 TnikP83510 1323 aa22.1■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Eif4g3Q80XI3 1579 aaKnown RBP22.09■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Adgrl2Q8JZZ7 1487 aa22.08■■□□□ 1.13
Lsm1-201ENSMUST00000038421 B4galnt3Q6L8S8 986 aa22.08■■□□□ 1.13
Lsm1-201ENSMUST00000038421 Zscan10Q3URR7 782 aa22.06■■□□□ 1.12
Lsm1-201ENSMUST00000038421 CrbnQ8C7D2 445 aa22.06■■□□□ 1.12
Lsm1-201ENSMUST00000038421 Plch2A2AP18 1501 aa22.04■■□□□ 1.12
Lsm1-201ENSMUST00000038421 Jph4Q80WT0 628 aa22.03■■□□□ 1.12
Lsm1-201ENSMUST00000038421 Ccdc9Q8VC31 543 aaKnown RBP22.03■■□□□ 1.12
Lsm1-201ENSMUST00000038421 Kif16bB1AVY7 1312 aa22.02■■□□□ 1.12
Lsm1-201ENSMUST00000038421 Neo1P97798 1493 aa22.02■■□□□ 1.12
Lsm1-201ENSMUST00000038421 Tmf1B9EKI3 1091 aa22.01■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Sart1Q9Z315 806 aaKnown RBP22.01■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Trappc8E9PWG2 1437 aa22.01■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Dnajc5bQ9CQ94 199 aa22■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Tex14Q7M6U3 1450 aa22■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Fam208aQ69ZR9 1610 aaKnown RBP22■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Fancd2Q80V62 1450 aa22■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Dbr1Q923B1 550 aa22■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Arhgap5P97393 1501 aa21.99■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Mroh3A0A1D5RM54 893 aa21.98■■□□□ 1.11
Lsm1-201ENSMUST00000038421 DaxxO35613 739 aa21.98■■□□□ 1.11
Lsm1-201ENSMUST00000038421 CanxP35564 591 aaKnown RBP21.98■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Mbd3Q9Z2D8 285 aaKnown RBP21.98■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Slc4a1apE9PX68 744 aa21.97■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Ppp2r1aQ76MZ3 589 aa21.96■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Dnmt1P13864 1620 aaKnown RBP21.96■■□□□ 1.11
Lsm1-201ENSMUST00000038421 Apbb1Q9QXJ1 710 aa21.95■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Arid4bA2CG63 1314 aaKnown RBP21.95■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Adamts13Q769J6 1426 aa21.95■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Nkx1-2P42580 305 aa21.95■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Rwdd1Q9CQK7 243 aa21.94■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Rrbp1Q99PL5 1605 aaKnown RBP21.94■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Kdm2bQ6P1G2 1309 aa21.93■■□□□ 1.1
Lsm1-201ENSMUST00000038421 4933416C03RikQ3V063 378 aa21.93■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Lrriq1Q0P5X1 1673 aa21.92■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Gm32742A0A1B0GT42 1604 aa21.92■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Ppip5k1A2ARP1 1436 aa21.92■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Kdm2aP59997 1161 aa21.91■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Ttc41Q692V3 1318 aa21.91■■□□□ 1.1
Lsm1-201ENSMUST00000038421 EspnQ9ET47 871 aa21.91■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Gtf3c3Q3TMP1 882 aa21.9■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Chmp5Q9D7S9 219 aa21.9■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Srcin1Q9QWI6 1250 aa21.9■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Erich6D3Z6S9 713 aa21.89■■□□□ 1.1
Lsm1-201ENSMUST00000038421 Spag9Q58A65 1321 aaKnown RBP21.89■■□□□ 1.09
Lsm1-201ENSMUST00000038421 AknaQ80VW7 1404 aa21.89■■□□□ 1.09
Lsm1-201ENSMUST00000038421 Irx3P81067 507 aa21.89■■□□□ 1.09
Lsm1-201ENSMUST00000038421 Sart3Q9JLI8 962 aaKnown RBP21.89■■□□□ 1.09
Lsm1-201ENSMUST00000038421 Mast1Q9R1L5 1570 aa21.89■■□□□ 1.09
Lsm1-201ENSMUST00000038421 Rab3gap2Q8BMG7 1366 aa21.88■■□□□ 1.09
Lsm1-201ENSMUST00000038421 Plekhh1Q80TI1 1356 aa21.88■■□□□ 1.09
Retrieved 100 of 22,080 RNA–protein pairs in 44.7 ms