RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Slc4a2P13808 1237 aaKnown RBP17.54■□□□□ 0.4
Rnf4-201ENSMUST00000030992 Polr3aB2RXC6 1390 aa17.53■□□□□ 0.4
Rnf4-201ENSMUST00000030992 Abca8bQ8K440 1620 aa17.53■□□□□ 0.4
Rnf4-201ENSMUST00000030992 Abcc1O35379 1528 aa17.52■□□□□ 0.4
Rnf4-201ENSMUST00000030992 Cdc42bpbQ7TT50 1713 aa17.52■□□□□ 0.4
Rnf4-201ENSMUST00000030992 PnisrA2AJT4 805 aaKnown RBP17.51■□□□□ 0.39
Rnf4-201ENSMUST00000030992 Mrs2Q5NCE8 434 aa17.51■□□□□ 0.39
Rnf4-201ENSMUST00000030992 Card11Q8CIS0 1159 aa17.5■□□□□ 0.39
Rnf4-201ENSMUST00000030992 Exoc6Q8R313 802 aa17.5■□□□□ 0.39
Rnf4-201ENSMUST00000030992 Clstn2Q9ER65 966 aa17.5■□□□□ 0.39
Rnf4-201ENSMUST00000030992 Robo2Q7TPD3 1470 aa17.49■□□□□ 0.39
Rnf4-201ENSMUST00000030992 Wwc2Q6NXJ0 1187 aa17.49■□□□□ 0.39
Rnf4-201ENSMUST00000030992 Rrp7aQ9D1C9 280 aaKnown RBP17.49■□□□□ 0.39
Rnf4-201ENSMUST00000030992 Sart1Q9Z315 806 aaKnown RBP17.49■□□□□ 0.39
Rnf4-201ENSMUST00000030992 Atp7aQ64430 1491 aa17.48■□□□□ 0.39
Rnf4-201ENSMUST00000030992 Ppip5k1A2ARP1 1436 aa17.47■□□□□ 0.39
Rnf4-201ENSMUST00000030992 Cd109Q8R422 1442 aa17.47■□□□□ 0.39
Rnf4-201ENSMUST00000030992 Rock2P70336 1388 aa17.46■□□□□ 0.39
Rnf4-201ENSMUST00000030992 Tarbp1E9Q368 1579 aa17.46■□□□□ 0.39
Rnf4-201ENSMUST00000030992 Gapvd1Q6PAR5 1458 aa17.46■□□□□ 0.39
Rnf4-201ENSMUST00000030992 Washc2Q6PGL7 1334 aa17.45■□□□□ 0.38
Rnf4-201ENSMUST00000030992 Grwd1Q810D6 446 aaKnown RBP17.45■□□□□ 0.38
Rnf4-201ENSMUST00000030992 Slc24a1Q91WD8 1130 aa17.44■□□□□ 0.38
Rnf4-201ENSMUST00000030992 Setd1aE9PYH6 1716 aa17.44■□□□□ 0.38
Rnf4-201ENSMUST00000030992 Atp10dQ8K2X1 1416 aa17.44■□□□□ 0.38
Rnf4-201ENSMUST00000030992 Calr4Q3TQS0 420 aa17.43■□□□□ 0.38
Rnf4-201ENSMUST00000030992 AI481877A2ALV5 1481 aa17.43■□□□□ 0.38
Rnf4-201ENSMUST00000030992 Kidins220E9Q9B7 1793 aa17.42■□□□□ 0.38
Rnf4-201ENSMUST00000030992 Tubgcp6G5E8P0 1769 aa17.42■□□□□ 0.38
Rnf4-201ENSMUST00000030992 Prdm16A2A935 1275 aa17.42■□□□□ 0.38
Rnf4-201ENSMUST00000030992 Abca17E9PX95 1733 aa17.42■□□□□ 0.38
Rnf4-201ENSMUST00000030992 Cep170Q6A065 1588 aa17.41■□□□□ 0.38
Rnf4-201ENSMUST00000030992 Adamts13Q769J6 1426 aa17.4■□□□□ 0.38
Rnf4-201ENSMUST00000030992 ShprhQ7TPQ3 1674 aa17.39■□□□□ 0.37
Rnf4-201ENSMUST00000030992 Kdm5cP41230 1554 aa17.38■□□□□ 0.37
Rnf4-201ENSMUST00000030992 Spag9Q58A65 1321 aaKnown RBP17.38■□□□□ 0.37
Rnf4-201ENSMUST00000030992 NrdcQ8BHG1 1161 aa17.38■□□□□ 0.37
Rnf4-201ENSMUST00000030992 Usp54Q8BL06 1588 aaKnown RBP17.37■□□□□ 0.37
Rnf4-201ENSMUST00000030992 Edc4Q3UJB9 1406 aaKnown RBP17.36■□□□□ 0.37
Rnf4-201ENSMUST00000030992 Znf608Q56A10 1511 aa17.36■□□□□ 0.37
Rnf4-201ENSMUST00000030992 Xrn1P97789 1719 aaKnown RBP17.35■□□□□ 0.37
Rnf4-201ENSMUST00000030992 Igf1rQ60751 1373 aa17.35■□□□□ 0.37
Rnf4-201ENSMUST00000030992 Kif1bQ60575 1816 aaKnown RBP17.34■□□□□ 0.37
Rnf4-201ENSMUST00000030992 Pde4cQ3UEI1 686 aa17.33■□□□□ 0.36
Rnf4-201ENSMUST00000030992 Zbtb7cQ8VCZ7 619 aa17.33■□□□□ 0.36
Rnf4-201ENSMUST00000030992 Map3k5O35099 1380 aa17.31■□□□□ 0.36
Rnf4-201ENSMUST00000030992 Anp32aO35381 247 aa17.3■□□□□ 0.36
Rnf4-201ENSMUST00000030992 Zfyve16Q80U44 1528 aa17.3■□□□□ 0.36
Rnf4-201ENSMUST00000030992 Tulp4Q9JIL5 1547 aa17.3■□□□□ 0.36
Rnf4-201ENSMUST00000030992 Nsd2Q8BVE8 1365 aa17.28■□□□□ 0.36
Rnf4-201ENSMUST00000030992 Abca9Q8K449 1623 aa17.28■□□□□ 0.36
Rnf4-201ENSMUST00000030992 Myo5cE9Q1F5 1742 aa17.27■□□□□ 0.36
Rnf4-201ENSMUST00000030992 Ythdc2B2RR83 1445 aaKnown RBP17.26■□□□□ 0.35
Rnf4-201ENSMUST00000030992 Fam71e1A1L3C1 212 aa17.26■□□□□ 0.35
Rnf4-201ENSMUST00000030992 Uggt2E9Q4X2 1504 aa17.26■□□□□ 0.35
Rnf4-201ENSMUST00000030992 Nos1Q9Z0J4 1429 aa17.25■□□□□ 0.35
Rnf4-201ENSMUST00000030992 Ifit1bl1D3Z6F0 470 aa17.25■□□□□ 0.35
Rnf4-201ENSMUST00000030992 Eif5bQ05D44 1216 aaKnown RBP17.24■□□□□ 0.35
Rnf4-201ENSMUST00000030992 Hdac5Q9Z2V6 1113 aa17.24■□□□□ 0.35
Rnf4-201ENSMUST00000030992 Tmem131lQ3U3D7 1597 aa17.24■□□□□ 0.35
Rnf4-201ENSMUST00000030992 Zmym4A2A791 1549 aaKnown RBP17.23■□□□□ 0.35
Rnf4-201ENSMUST00000030992 Fndc1E9Q043 1732 aa17.23■□□□□ 0.35
Rnf4-201ENSMUST00000030992 PtprtQ99M80 1454 aa17.22■□□□□ 0.35
Rnf4-201ENSMUST00000030992 Ylpm1Q9R0I7 1386 aaKnown RBP17.22■□□□□ 0.35
Rnf4-201ENSMUST00000030992 Abcc6Q9R1S7 1498 aa17.21■□□□□ 0.35
Rnf4-201ENSMUST00000030992 Nolc1E9Q5C9 702 aaKnown RBP17.21■□□□□ 0.35
Rnf4-201ENSMUST00000030992 Pola1P33609 1465 aa17.2■□□□□ 0.34
Rnf4-201ENSMUST00000030992 Ofd1Q80Z25 1017 aa17.2■□□□□ 0.34
Rnf4-201ENSMUST00000030992 Myt1Q8CFC2 1127 aa17.19■□□□□ 0.34
Rnf4-201ENSMUST00000030992 AnkarA2RT91 1465 aa17.19■□□□□ 0.34
Rnf4-201ENSMUST00000030992 Plch2A2AP18 1501 aa17.19■□□□□ 0.34
Rnf4-201ENSMUST00000030992 PrxO55103 1391 aa17.19■□□□□ 0.34
Rnf4-201ENSMUST00000030992 Sbno1Q689Z5 1390 aa17.19■□□□□ 0.34
Rnf4-201ENSMUST00000030992 Mroh3A0A1D5RM54 893 aa17.18■□□□□ 0.34
Rnf4-201ENSMUST00000030992 Rpgrip1lQ8CG73 1264 aa17.18■□□□□ 0.34
Rnf4-201ENSMUST00000030992 P3h3Q8CG70 732 aa17.17■□□□□ 0.34
Rnf4-201ENSMUST00000030992 Znf518aB2RRF6 1478 aaKnown RBP17.17■□□□□ 0.34
Rnf4-201ENSMUST00000030992 Abca6Q8K441 1624 aa17.15■□□□□ 0.34
Rnf4-201ENSMUST00000030992 Iqgap3F8VQ29 1632 aa17.15■□□□□ 0.34
Rnf4-201ENSMUST00000030992 L3mbtl2P59178 703 aa17.14■□□□□ 0.34
Rnf4-201ENSMUST00000030992 Pank3Q8R2W9 370 aa17.14■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Topbp1Q6ZQF0 1515 aa17.14■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Abca8aQ8K442 1620 aa17.13■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Wdr43Q6ZQL4 677 aaKnown RBP17.13■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Cep152A2AUM9 1736 aaKnown RBP17.13■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Ttbk1Q6PCN3 1308 aa17.13■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Tex14Q7M6U3 1450 aa17.12■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Zscan21Q07231 555 aa17.12■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Itsn2Q9Z0R6 1659 aa17.12■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Sall3Q62255 1320 aa17.11■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Kank1E9Q238 1360 aa17.11■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Trpm1Q2TV84 1622 aa17.11■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Kif3bQ61771 747 aa17.11■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Ttc21bQ0HA38 1315 aa17.1■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Gm16486A0A1D5RMD1 1434 aa17.1■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Ifnlr1Q8CGK5 535 aa17.1■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Inpp5dQ9ES52 1191 aa17.1■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Anp32bQ9EST5 272 aaKnown RBP17.1■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Zbtb4Q5F293 982 aa17.1■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Zscan10Q3URR7 782 aa17.09■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 71 ms