RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 PDE11AQ9HCR9 933 aa18.53■□□□□ 0.56
PHGDH-229ENST00000641891 PXMP2Q9NR77 195 aa18.53■□□□□ 0.56
PHGDH-229ENST00000641891 PACSIN2Q9UNF0 486 aaPredicted RBP18.53■□□□□ 0.56
PHGDH-229ENST00000641891 FRMD4BQ9Y2L6 1034 aa18.53■□□□□ 0.56
PHGDH-229ENST00000641891 PPP1R12BO60237 982 aaPredicted RBP18.52■□□□□ 0.56
PHGDH-229ENST00000641891 GFPT2O94808 682 aa18.52■□□□□ 0.56
PHGDH-229ENST00000641891 CASP8Q14790 479 aa18.52■□□□□ 0.56
PHGDH-229ENST00000641891 ZNF572Q7Z3I7 529 aaPredicted RBP18.52■□□□□ 0.56
PHGDH-229ENST00000641891 SPATA4Q8NEY3 305 aa18.52■□□□□ 0.56
PHGDH-229ENST00000641891 PCIF1Q9H4Z3 704 aa18.52■□□□□ 0.56
PHGDH-229ENST00000641891 FBXL5Q9UKA1 691 aa18.52■□□□□ 0.56
PHGDH-229ENST00000641891 ZNF541Q9H0D2 1346 aa18.52■□□□□ 0.56
PHGDH-229ENST00000641891 TARSL2A2RTX5 802 aaKnown RBP18.52■□□□□ 0.56
PHGDH-229ENST00000641891 TESPA1A2RU30 521 aaPredicted RBP18.52■□□□□ 0.56
PHGDH-229ENST00000641891 GRID2IPA4D2P6 1211 aa18.52■□□□□ 0.56
PHGDH-229ENST00000641891 LRRIQ3A6PVS8 624 aaPredicted RBP18.52■□□□□ 0.56
PHGDH-229ENST00000641891 BACH1O14867 736 aa18.52■□□□□ 0.56
PHGDH-229ENST00000641891 CCNE2O96020 404 aa18.52■□□□□ 0.56
PHGDH-229ENST00000641891 TUBBP07437 444 aa18.52■□□□□ 0.56
PHGDH-229ENST00000641891 MYBL2P10244 700 aa18.52■□□□□ 0.56
PHGDH-229ENST00000641891 YWHABP31946 246 aaKnown RBP18.52■□□□□ 0.56
PHGDH-229ENST00000641891 PRKCIP41743 596 aa18.52■□□□□ 0.56
PHGDH-229ENST00000641891 PLA2G4FQ68DD2 849 aa18.52■□□□□ 0.56
PHGDH-229ENST00000641891 HDAC7Q8WUI4 952 aa18.52■□□□□ 0.56
PHGDH-229ENST00000641891 WRNIP1Q96S55 665 aa18.52■□□□□ 0.56
PHGDH-229ENST00000641891 GPRC5CQ9NQ84 441 aa18.52■□□□□ 0.56
PHGDH-229ENST00000641891 RNF146Q9NTX7 359 aa18.52■□□□□ 0.56
PHGDH-229ENST00000641891 NAGPAQ9UK23 515 aa18.52■□□□□ 0.56
PHGDH-229ENST00000641891 DBR1Q9UK59 544 aaKnown RBP18.52■□□□□ 0.56
PHGDH-229ENST00000641891 EXOC3O60645 756 aa18.51■□□□□ 0.55
PHGDH-229ENST00000641891 BACE1P56817 501 aa18.51■□□□□ 0.55
PHGDH-229ENST00000641891 BAATQ14032 418 aaPredicted RBP18.51■□□□□ 0.55
PHGDH-229ENST00000641891 CCDC181Q5TID7 509 aa18.51■□□□□ 0.55
PHGDH-229ENST00000641891 ARHGEF16Q5VV41 709 aa18.51■□□□□ 0.55
PHGDH-229ENST00000641891 ZNF771Q7L3S4 317 aaPredicted RBP18.51■□□□□ 0.55
PHGDH-229ENST00000641891 SCYL3Q8IZE3 742 aa18.51■□□□□ 0.55
PHGDH-229ENST00000641891 GINM1Q9NU53 330 aa18.51■□□□□ 0.55
PHGDH-229ENST00000641891 PCDHGC5Q9Y5F6 944 aa18.51■□□□□ 0.55
PHGDH-229ENST00000641891 COL11A1P12107 1806 aaPredicted RBP18.51■□□□□ 0.55
PHGDH-229ENST00000641891 MMGT1Q8N4V1 131 aa18.51■□□□□ 0.55
PHGDH-229ENST00000641891 ZSWIM2Q8NEG5 633 aa18.51■□□□□ 0.55
PHGDH-229ENST00000641891 LRRC1Q9BTT6 524 aa18.51■□□□□ 0.55
PHGDH-229ENST00000641891 TBC1D22BQ9NU19 505 aa18.51■□□□□ 0.55
PHGDH-229ENST00000641891 BZW2Q9Y6E2 419 aaKnown RBP18.51■□□□□ 0.55
PHGDH-229ENST00000641891 FZD9O00144 591 aa18.5■□□□□ 0.55
PHGDH-229ENST00000641891 N4BP1O75113 896 aaKnown RBP18.5■□□□□ 0.55
PHGDH-229ENST00000641891 PTPRAP18433 802 aa18.5■□□□□ 0.55
PHGDH-229ENST00000641891 GYS2P54840 703 aa18.5■□□□□ 0.55
PHGDH-229ENST00000641891 HMGCS2P54868 508 aa18.5■□□□□ 0.55
PHGDH-229ENST00000641891 DLG4P78352 724 aa18.5■□□□□ 0.55
PHGDH-229ENST00000641891 ANGEL2Q5VTE6 544 aaKnown RBP18.5■□□□□ 0.55
PHGDH-229ENST00000641891 ALKBH5Q6P6C2 394 aaKnown RBP18.5■□□□□ 0.55
PHGDH-229ENST00000641891 GDAP1L1Q96MZ0 367 aa18.5■□□□□ 0.55
PHGDH-229ENST00000641891 INTS2Q9H0H0 1204 aaKnown RBP18.5■□□□□ 0.55
PHGDH-229ENST00000641891 GOLPH3Q9H4A6 298 aa18.5■□□□□ 0.55
PHGDH-229ENST00000641891 MAP3K20Q9NYL2 800 aaKnown RBP18.5■□□□□ 0.55
PHGDH-229ENST00000641891 LARSQ9P2J5 1176 aaKnown RBP18.5■□□□□ 0.55
PHGDH-229ENST00000641891 NENFQ9UMX5 172 aa18.5■□□□□ 0.55
PHGDH-229ENST00000641891 FAM170AA1A519 330 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 F8VZ95 297 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 DDX3XO00571 662 aaKnown RBP eCLIP18.49■□□□□ 0.557e-18■■■□□ 16.8
PHGDH-229ENST00000641891 PLS3P13797 630 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 NPEPPSP55786 919 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 MYL7Q01449 175 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 BFSP1Q12934 665 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 MEI1Q5TIA1 1274 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 OLIG1Q8TAK6 271 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 CBWD1Q9BRT8 395 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 DNAJC12Q9UKB3 198 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 EVI5O60447 810 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 LYPLA2O95372 231 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 TNNT3P45378 269 aaPredicted RBP18.49■□□□□ 0.55
PHGDH-229ENST00000641891 SLC7A5Q01650 507 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 DRAP1Q14919 205 aaPredicted RBP18.49■□□□□ 0.55
PHGDH-229ENST00000641891 PTPROQ16827 1216 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 DCAF15Q66K64 600 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 SNRNP48Q6IEG0 339 aaKnown RBP18.49■□□□□ 0.55
PHGDH-229ENST00000641891 SLC9A9Q8IVB4 645 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 ZNF280CQ8ND82 737 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 REPS2Q8NFH8 660 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 GOLGA5Q8TBA6 731 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 CCDC43Q96MW1 224 aaKnown RBP18.49■□□□□ 0.55
PHGDH-229ENST00000641891 GPR88Q9GZN0 384 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 MTFR1LQ9H019 292 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 RBM12Q9NTZ6 932 aaKnown RBP18.49■□□□□ 0.55
PHGDH-229ENST00000641891 PRDM4Q9UKN5 801 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 TELO2Q9Y4R8 837 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 RLFQ13129 1914 aa18.49■□□□□ 0.55
PHGDH-229ENST00000641891 SLC16A4O15374 487 aa18.48■□□□□ 0.55
PHGDH-229ENST00000641891 STAT1P42224 750 aa18.48■□□□□ 0.55
PHGDH-229ENST00000641891 PPP2R5AQ15172 486 aa18.48■□□□□ 0.55
PHGDH-229ENST00000641891 LNX1Q8TBB1 728 aaPredicted RBP18.48■□□□□ 0.55
PHGDH-229ENST00000641891 TRPM4Q8TD43 1214 aa18.48■□□□□ 0.55
PHGDH-229ENST00000641891 PICK1Q9NRD5 415 aa18.48■□□□□ 0.55
PHGDH-229ENST00000641891 DMGDHQ9UI17 866 aaKnown RBP18.48■□□□□ 0.55
PHGDH-229ENST00000641891 ZNF112Q9UJU3 913 aa18.48■□□□□ 0.55
PHGDH-229ENST00000641891 ZHX1Q9UKY1 873 aaPredicted RBP18.48■□□□□ 0.55
PHGDH-229ENST00000641891 LRRN2O75325 713 aa18.48■□□□□ 0.55
PHGDH-229ENST00000641891 SOX5P35711 763 aa18.48■□□□□ 0.55
PHGDH-229ENST00000641891 PAFAH1B1P43034 410 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms