RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 NAP1L1P55209 391 aaKnown RBP19.52■□□□□ 0.72
PHGDH-226ENST00000641756 PTK2Q05397 1052 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 IQCEQ6IPM2 695 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 MSANTD4Q8NCY6 345 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.52■□□□□ 0.722e-7■■□□□ 13.6
PHGDH-226ENST00000641756 ALS2CR12Q96Q35 445 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 TEX13BQ9BXU2 312 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 PACSIN1Q9BY11 444 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 A1CFQ9NQ94 594 aaKnown RBP19.52■□□□□ 0.72
PHGDH-226ENST00000641756 FAM53CQ9NYF3 392 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 PPP2R3BQ9Y5P8 575 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 USP2O75604 605 aaPredicted RBP19.52■□□□□ 0.72
PHGDH-226ENST00000641756 RGS20O76081 388 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 SP4Q02446 784 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 SUPT20HL1Q3ZLR7 823 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 CBWD6Q4V339 395 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 CBWD3Q5JTY5 395 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 CBWD5Q5RIA9 395 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 NOL9Q5SY16 702 aaKnown RBP19.52■□□□□ 0.72
PHGDH-226ENST00000641756 FAM102BQ5T8I3 360 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 ZNF571Q7Z3V5 609 aaPredicted RBP19.52■□□□□ 0.72
PHGDH-226ENST00000641756 GOLGA5Q8TBA6 731 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 CAGE1Q8TC20 777 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 NSUN6Q8TEA1 469 aaKnown RBP19.52■□□□□ 0.72
PHGDH-226ENST00000641756 GPRASP2Q96D09 838 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 ACAD9Q9H845 621 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 RNF216Q9NWF9 866 aaPredicted RBP19.52■□□□□ 0.72
PHGDH-226ENST00000641756 CYP39A1Q9NYL5 469 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 KIAA1217Q5T5P2 1943 aa19.51■□□□□ 0.71
PHGDH-226ENST00000641756 GTPBP10A4D1E9 387 aaKnown RBP19.51■□□□□ 0.71
PHGDH-226ENST00000641756 NCK2O43639 380 aa19.51■□□□□ 0.71
PHGDH-226ENST00000641756 PEX10O60683 326 aa19.51■□□□□ 0.71
PHGDH-226ENST00000641756 DDNO94850 711 aaPredicted RBP19.51■□□□□ 0.71
PHGDH-226ENST00000641756 PEX3P56589 373 aa19.51■□□□□ 0.71
PHGDH-226ENST00000641756 XRRA1Q6P2D8 792 aa19.51■□□□□ 0.71
PHGDH-226ENST00000641756 KRT222Q8N1A0 295 aa19.51■□□□□ 0.71
PHGDH-226ENST00000641756 TXLNBQ8N3L3 684 aa19.51■□□□□ 0.71
PHGDH-226ENST00000641756 INPP4AQ96PE3 977 aaPredicted RBP19.51■□□□□ 0.71
PHGDH-226ENST00000641756 MOV10L1Q9BXT6 1211 aaKnown RBP19.51■□□□□ 0.71
PHGDH-226ENST00000641756 SNX12Q9UMY4 172 aa19.51■□□□□ 0.71
PHGDH-226ENST00000641756 PDE2AO00408 941 aaPredicted RBP19.51■□□□□ 0.71
PHGDH-226ENST00000641756 SLC16A4O15374 487 aa19.51■□□□□ 0.71
PHGDH-226ENST00000641756 JAM2P57087 298 aa19.51■□□□□ 0.71
PHGDH-226ENST00000641756 HAUS6Q7Z4H7 955 aa19.51■□□□□ 0.71
PHGDH-226ENST00000641756 NOX5Q96PH1 765 aa19.51■□□□□ 0.71
PHGDH-226ENST00000641756 ACCSQ96QU6 501 aa19.51■□□□□ 0.71
PHGDH-226ENST00000641756 PSMB7Q99436 277 aa19.51■□□□□ 0.71
PHGDH-226ENST00000641756 ARFGAP3Q9NP61 516 aa19.51■□□□□ 0.71
PHGDH-226ENST00000641756 GABBR1Q9UBS5 961 aa19.51■□□□□ 0.71
PHGDH-226ENST00000641756 PCDHA10Q9Y5I2 948 aa19.51■□□□□ 0.71
PHGDH-226ENST00000641756 DOCK5Q9H7D0 1870 aa19.5■□□□□ 0.71
PHGDH-226ENST00000641756 POTEB2H3BUK9 544 aa19.5■□□□□ 0.71
PHGDH-226ENST00000641756 MAPTP10636 758 aaKnown RBP19.5■□□□□ 0.71
PHGDH-226ENST00000641756 KCNA2P16389 499 aa19.5■□□□□ 0.71
PHGDH-226ENST00000641756 KLRC1P26715 233 aa19.5■□□□□ 0.71
PHGDH-226ENST00000641756 BFSP1Q12934 665 aa19.5■□□□□ 0.71
PHGDH-226ENST00000641756 VGLL4Q14135 290 aa19.5■□□□□ 0.71
PHGDH-226ENST00000641756 ZNF746Q6NUN9 644 aaPredicted RBP19.5■□□□□ 0.71
PHGDH-226ENST00000641756 ANO5Q75V66 913 aa19.5■□□□□ 0.71
PHGDH-226ENST00000641756 DNAAF5Q86Y56 855 aa19.5■□□□□ 0.71
PHGDH-226ENST00000641756 SLC9A9Q8IVB4 645 aa19.5■□□□□ 0.71
PHGDH-226ENST00000641756 CNKSR2Q8WXI2 1034 aa19.5■□□□□ 0.71
PHGDH-226ENST00000641756 CBWD1Q9BRT8 395 aa19.5■□□□□ 0.71
PHGDH-226ENST00000641756 TMEM206Q9H813 350 aa19.5■□□□□ 0.71
PHGDH-226ENST00000641756 LUC7LQ9NQ29 371 aaKnown RBP19.5■□□□□ 0.71
PHGDH-226ENST00000641756 SNCAIPQ9Y6H5 919 aa19.5■□□□□ 0.71
PHGDH-226ENST00000641756 WDR90Q96KV7 1748 aa19.5■□□□□ 0.71
PHGDH-226ENST00000641756 ATP2A1O14983 1001 aa19.49■□□□□ 0.71
PHGDH-226ENST00000641756 TBC1D8O95759 1140 aa19.49■□□□□ 0.71
PHGDH-226ENST00000641756 TUBB4BP68371 445 aa19.49■□□□□ 0.71
PHGDH-226ENST00000641756 CKAP4Q07065 602 aaKnown RBP19.49■□□□□ 0.71
PHGDH-226ENST00000641756 KIAA0753Q2KHM9 967 aa19.49■□□□□ 0.71
PHGDH-226ENST00000641756 NFRKBQ6P4R8 1299 aa19.49■□□□□ 0.71
PHGDH-226ENST00000641756 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.49■□□□□ 0.71
PHGDH-226ENST00000641756 ZSWIM2Q8NEG5 633 aa19.49■□□□□ 0.71
PHGDH-226ENST00000641756 PRDM10Q9NQV6 1147 aa19.49■□□□□ 0.71
PHGDH-226ENST00000641756 HOXC10Q9NYD6 342 aa19.49■□□□□ 0.71
PHGDH-226ENST00000641756 FBXL5Q9UKA1 691 aa19.49■□□□□ 0.71
PHGDH-226ENST00000641756 DICER1Q9UPY3 1922 aaKnown RBP19.49■□□□□ 0.71
PHGDH-226ENST00000641756 CCDC151A5D8V7 595 aa19.49■□□□□ 0.71
PHGDH-226ENST00000641756 SASH3O75995 380 aa19.49■□□□□ 0.71
PHGDH-226ENST00000641756 DLG4P78352 724 aa19.49■□□□□ 0.71
PHGDH-226ENST00000641756 ALCAMQ13740 583 aa19.49■□□□□ 0.71
PHGDH-226ENST00000641756 BRD3Q15059 726 aa19.49■□□□□ 0.71
PHGDH-226ENST00000641756 PPP2R5AQ15172 486 aa19.49■□□□□ 0.71
PHGDH-226ENST00000641756 TREML2Q5T2D2 321 aa19.49■□□□□ 0.71
PHGDH-226ENST00000641756 COG1Q8WTW3 980 aa19.49■□□□□ 0.71
PHGDH-226ENST00000641756 ANKEF1Q9NU02 776 aa19.49■□□□□ 0.71
PHGDH-226ENST00000641756 RAB21Q9UL25 225 aa19.49■□□□□ 0.71
PHGDH-226ENST00000641756 ZNF862O60290 1169 aa19.48■□□□□ 0.71
PHGDH-226ENST00000641756 GFPT2O94808 682 aa19.48■□□□□ 0.71
PHGDH-226ENST00000641756 CXCR5P32302 372 aa19.48■□□□□ 0.71
PHGDH-226ENST00000641756 SOX10P56693 466 aa19.48■□□□□ 0.71
PHGDH-226ENST00000641756 VSNL1P62760 191 aa19.48■□□□□ 0.71
PHGDH-226ENST00000641756 GTF2BQ00403 316 aa19.48■□□□□ 0.71
PHGDH-226ENST00000641756 MYL7Q01449 175 aa19.48■□□□□ 0.71
PHGDH-226ENST00000641756 NAB2Q15742 525 aa19.48■□□□□ 0.71
PHGDH-226ENST00000641756 RNF10Q8N5U6 811 aaKnown RBP19.48■□□□□ 0.71
PHGDH-226ENST00000641756 KIFC3Q9BVG8 833 aa19.48■□□□□ 0.71
PHGDH-226ENST00000641756 BZW2Q9Y6E2 419 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms