RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 SLC7A3Q8WY07 619 aa10.68□□□□□ -0.7
PHGDH-215ENST00000641371 BBXQ8WY36 941 aaPredicted RBP10.68□□□□□ -0.7
PHGDH-215ENST00000641371 VTI1AQ96AJ9 217 aa10.68□□□□□ -0.7
PHGDH-215ENST00000641371 FIZ1Q96SL8 496 aa10.68□□□□□ -0.7
PHGDH-215ENST00000641371 NMRK2Q9NPI5 230 aa10.68□□□□□ -0.7
PHGDH-215ENST00000641371 SEPT9Q9UHD8 586 aaPredicted RBP10.68□□□□□ -0.7
PHGDH-215ENST00000641371 PYCARDQ9ULZ3 195 aa10.68□□□□□ -0.7
PHGDH-215ENST00000641371 DOCK5Q9H7D0 1870 aa10.68□□□□□ -0.7
PHGDH-215ENST00000641371 ZNF862O60290 1169 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 GYPCP04921 128 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 SLC10A3P09131 477 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 KRT9P35527 623 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 NAMPTP43490 491 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 POLGP54098 1239 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-215ENST00000641371 TERF1P54274 439 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 CDK17Q00537 523 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 RBL2Q08999 1139 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 SYCP1Q15431 976 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 DNTTIP2Q5QJE6 756 aaKnown RBP10.67□□□□□ -0.7
PHGDH-215ENST00000641371 FAM102BQ5T8I3 360 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 CST9Q5W186 159 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 CCDC62Q6P9F0 684 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 INTS8Q75QN2 995 aaKnown RBP10.67□□□□□ -0.7
PHGDH-215ENST00000641371 ARMCX2Q7L311 632 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 HAUS6Q7Z4H7 955 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 GPR142Q7Z601 462 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 DPP9Q86TI2 863 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 SAPCD2Q86UD0 394 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 DAW1Q8N136 415 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 NEK11Q8NG66 645 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 SOCS4Q8WXH5 440 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 FGD4Q96M96 766 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 PCMTD1Q96MG8 357 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-215ENST00000641371 PORCNQ9H237 461 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 ABHD16BQ9H3Z7 469 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 SMARCAD1Q9H4L7 1026 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 EFCC1Q9HA90 598 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 KMT5AQ9NQR1 393 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 PDLIM7Q9NR12 457 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 AGPAT3Q9NRZ7 376 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 ABHD10Q9NUJ1 306 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 DMAC2Q9NW81 257 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 MYO6Q9UM54 1294 aa10.67□□□□□ -0.7
PHGDH-215ENST00000641371 PASKQ96RG2 1323 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 UTRNP46939 3433 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 GSTTP1A0A1W2PQM5 241 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 ZBTB39O15060 712 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 P4HA2O15460 535 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 TGFB1I1O43294 461 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 HBP1O60381 514 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 STBD1O95210 358 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 IPO7O95373 1038 aaKnown RBP10.66□□□□□ -0.7
PHGDH-215ENST00000641371 ALDH1A1P00352 501 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 GH1P01241 217 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 AFPP02771 609 aaKnown RBP10.66□□□□□ -0.7
PHGDH-215ENST00000641371 PGK2P07205 417 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 TXNP10599 105 aaKnown RBP10.66□□□□□ -0.7
PHGDH-215ENST00000641371 KRT13P13646 458 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 RFX1P22670 979 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 NMT1P30419 496 aaKnown RBP10.66□□□□□ -0.7
PHGDH-215ENST00000641371 CASP14P31944 242 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 CASP5P51878 434 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 PEX3P56589 373 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 SP2Q02086 613 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 CETN1Q12798 172 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 EMC2Q15006 297 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 UTP14CQ5TAP6 766 aaKnown RBP10.66□□□□□ -0.7
PHGDH-215ENST00000641371 SMYD5Q6GMV2 418 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 MAP4K3Q8IVH8 894 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 FAM186BQ8IYM0 893 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 CCDC170Q8IYT3 715 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 CCAR2Q8N163 923 aaKnown RBP10.66□□□□□ -0.7
PHGDH-215ENST00000641371 SMC1BQ8NDV3 1235 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 GLIS3Q8NEA6 775 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 SYN2Q92777 582 aaPredicted RBP10.66□□□□□ -0.7
PHGDH-215ENST00000641371 DNAJC7Q99615 494 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 GPR20Q99678 358 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 DHX33Q9H6R0 707 aaKnown RBP10.66□□□□□ -0.7
PHGDH-215ENST00000641371 ZFYVE28Q9HCC9 887 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 KIAA1586Q9HCI6 787 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 PLCB1Q9NQ66 1216 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 FBXL5Q9UKA1 691 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 TLL2Q9Y6L7 1015 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 MCM3APO60318 1980 aa10.66□□□□□ -0.7
PHGDH-215ENST00000641371 COL1A2P08123 1366 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 ZMYM2Q9UBW7 1377 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 ADGRA2Q96PE1 1338 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 SFI1A8K8P3 1242 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 PMM2O15305 246 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 ASAP2O43150 1006 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 COBLO75128 1261 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 CCDC175P0C221 793 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 GARTP22102 1010 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 HNRNPH3P31942 346 aaKnown RBP10.65□□□□□ -0.7
PHGDH-215ENST00000641371 HOXD13P35453 343 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 CYLC1P35663 651 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-215ENST00000641371 TCF7P36402 384 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-215ENST00000641371 NPTX2P47972 431 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 EFNA5P52803 228 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 NPEPPSP55786 919 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms