RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 FBXO41Q8TF61 875 aa18.63■□□□□ 0.57
PHGDH-211ENST00000641213 RMDN3Q96TC7 470 aa18.63■□□□□ 0.57
PHGDH-211ENST00000641213 SMARCAL1Q9NZC9 954 aa18.63■□□□□ 0.57
PHGDH-211ENST00000641213 LARSQ9P2J5 1176 aaKnown RBP18.63■□□□□ 0.57
PHGDH-211ENST00000641213 NENFQ9UMX5 172 aa18.63■□□□□ 0.57
PHGDH-211ENST00000641213 ARID2Q68CP9 1835 aa18.63■□□□□ 0.57
PHGDH-211ENST00000641213 VWA5AO00534 786 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 ZMYND10O75800 440 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 MAPTP10636 758 aaKnown RBP18.62■□□□□ 0.57
PHGDH-211ENST00000641213 ANXA13P27216 316 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 CBWD6Q4V339 395 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 CBWD3Q5JTY5 395 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 CBWD5Q5RIA9 395 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 MEI1Q5TIA1 1274 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 RNF207Q6ZRF8 634 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 WNK4Q96J92 1243 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 PDCD2LQ9BRP1 358 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 PXMP2Q9NR77 195 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 PRDM4Q9UKN5 801 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 PNMA2Q9UL42 364 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 LRRIQ3A6PVS8 624 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-211ENST00000641213 ATP9AO75110 1047 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 EIF3JO75822 258 aaKnown RBP18.62■□□□□ 0.57
PHGDH-211ENST00000641213 FTCDO95954 541 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 TRIM49P0CI25 452 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 TRIM49CP0CI26 452 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 PAFAH1B1P43034 410 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 UGCGQ16739 394 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 MAP9Q49MG5 647 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 CCDC70Q6NSX1 233 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 ALKBH5Q6P6C2 394 aaKnown RBP18.62■□□□□ 0.57
PHGDH-211ENST00000641213 ATG4CQ96DT6 458 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 GJA3Q9Y6H8 435 aa18.62■□□□□ 0.57
PHGDH-211ENST00000641213 GRID2IPA4D2P6 1211 aa18.61■□□□□ 0.57
PHGDH-211ENST00000641213 EXOC3O60645 756 aa18.61■□□□□ 0.57
PHGDH-211ENST00000641213 FDX1P10109 184 aa18.61■□□□□ 0.57
PHGDH-211ENST00000641213 FERP16591 822 aa18.61■□□□□ 0.57
PHGDH-211ENST00000641213 YWHABP31946 246 aaKnown RBP18.61■□□□□ 0.57
PHGDH-211ENST00000641213 STAT1P42224 750 aa18.61■□□□□ 0.57
PHGDH-211ENST00000641213 BACE1P56817 501 aa18.61■□□□□ 0.57
PHGDH-211ENST00000641213 GPS2Q13227 327 aa18.61■□□□□ 0.57
PHGDH-211ENST00000641213 ALCAMQ13740 583 aa18.61■□□□□ 0.57
PHGDH-211ENST00000641213 MYBPC2Q14324 1141 aa18.61■□□□□ 0.57
PHGDH-211ENST00000641213 NSMFQ6X4W1 530 aa18.61■□□□□ 0.57
PHGDH-211ENST00000641213 CCNI2Q6ZMN8 369 aaPredicted RBP18.61■□□□□ 0.57
PHGDH-211ENST00000641213 LRRC1Q9BTT6 524 aa18.61■□□□□ 0.57
PHGDH-211ENST00000641213 PPP1R1BQ9UD71 204 aaPredicted RBP18.61■□□□□ 0.57
PHGDH-211ENST00000641213 GFPT2O94808 682 aa18.61■□□□□ 0.57
PHGDH-211ENST00000641213 PLS3P13797 630 aa18.61■□□□□ 0.57
PHGDH-211ENST00000641213 BFSP1Q12934 665 aa18.61■□□□□ 0.57
PHGDH-211ENST00000641213 DCAF15Q66K64 600 aa18.61■□□□□ 0.57
PHGDH-211ENST00000641213 SCYL3Q8IZE3 742 aa18.61■□□□□ 0.57
PHGDH-211ENST00000641213 MS4A14Q96JA4 679 aa18.61■□□□□ 0.57
PHGDH-211ENST00000641213 SH2D3AQ9BRG2 576 aa18.61■□□□□ 0.57
PHGDH-211ENST00000641213 STK33Q9BYT3 514 aa18.61■□□□□ 0.57
PHGDH-211ENST00000641213 TMEM206Q9H813 350 aa18.61■□□□□ 0.57
PHGDH-211ENST00000641213 RNF14Q9UBS8 474 aa18.61■□□□□ 0.57
PHGDH-211ENST00000641213 RIPK3Q9Y572 518 aa18.61■□□□□ 0.57
PHGDH-211ENST00000641213 TMEM150BA6NC51 233 aa18.6■□□□□ 0.57
PHGDH-211ENST00000641213 F8VZ95 297 aa18.6■□□□□ 0.57
PHGDH-211ENST00000641213 MYBL2P10244 700 aa18.6■□□□□ 0.57
PHGDH-211ENST00000641213 SOX5P35711 763 aa18.6■□□□□ 0.57
PHGDH-211ENST00000641213 MATR3P43243 847 aaKnown RBP eCLIP18.6■□□□□ 0.57
PHGDH-211ENST00000641213 CFAP221Q4G0U5 840 aa18.6■□□□□ 0.57
PHGDH-211ENST00000641213 ARHGEF16Q5VV41 709 aa18.6■□□□□ 0.57
PHGDH-211ENST00000641213 VPS36Q86VN1 386 aa18.6■□□□□ 0.57
PHGDH-211ENST00000641213 DNAAF5Q86Y56 855 aa18.6■□□□□ 0.57
PHGDH-211ENST00000641213 C4orf19Q8IY42 314 aa18.6■□□□□ 0.57
PHGDH-211ENST00000641213 RDH13Q8NBN7 331 aa18.6■□□□□ 0.57
PHGDH-211ENST00000641213 HDAC7Q8WUI4 952 aa18.6■□□□□ 0.57
PHGDH-211ENST00000641213 ZKSCAN4Q969J2 545 aaPredicted RBP18.6■□□□□ 0.57
PHGDH-211ENST00000641213 INTS2Q9H0H0 1204 aaKnown RBP18.6■□□□□ 0.57
PHGDH-211ENST00000641213 ZNF112Q9UJU3 913 aa18.6■□□□□ 0.57
PHGDH-211ENST00000641213 DNAJC12Q9UKB3 198 aa18.6■□□□□ 0.57
PHGDH-211ENST00000641213 BCS1LQ9Y276 419 aa18.6■□□□□ 0.57
PHGDH-211ENST00000641213 ATP8B3O60423 1300 aa18.6■□□□□ 0.57
PHGDH-211ENST00000641213 TISP43B9A030 160 aa18.59■□□□□ 0.57
PHGDH-211ENST00000641213 EVI5O60447 810 aa18.59■□□□□ 0.57
PHGDH-211ENST00000641213 CCNE2O96020 404 aa18.59■□□□□ 0.57
PHGDH-211ENST00000641213 JAK3P52333 1124 aa18.59■□□□□ 0.57
PHGDH-211ENST00000641213 MYL7Q01449 175 aa18.59■□□□□ 0.57
PHGDH-211ENST00000641213 TMEM174Q8WUU8 243 aa18.59■□□□□ 0.57
PHGDH-211ENST00000641213 ACCSQ96QU6 501 aa18.59■□□□□ 0.57
PHGDH-211ENST00000641213 RNF146Q9NTX7 359 aa18.59■□□□□ 0.57
PHGDH-211ENST00000641213 PACSIN2Q9UNF0 486 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-211ENST00000641213 TESPA1A2RU30 521 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-211ENST00000641213 FZD9O00144 591 aa18.59■□□□□ 0.57
PHGDH-211ENST00000641213 DDX3XO00571 662 aaKnown RBP eCLIP18.59■□□□□ 0.577e-18■■■□□ 16.8
PHGDH-211ENST00000641213 BACH1O14867 736 aa18.59■□□□□ 0.57
PHGDH-211ENST00000641213 PSMC5P62195 406 aa18.59■□□□□ 0.57
PHGDH-211ENST00000641213 BAATQ14032 418 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-211ENST00000641213 DRAP1Q14919 205 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-211ENST00000641213 ZNF280CQ8ND82 737 aa18.59■□□□□ 0.57
PHGDH-211ENST00000641213 OLIG1Q8TAK6 271 aa18.59■□□□□ 0.57
PHGDH-211ENST00000641213 RUBCNQ92622 972 aa18.59■□□□□ 0.57
PHGDH-211ENST00000641213 CCDC43Q96MW1 224 aaKnown RBP18.59■□□□□ 0.57
PHGDH-211ENST00000641213 PCIF1Q9H4Z3 704 aa18.59■□□□□ 0.57
PHGDH-211ENST00000641213 VIPAS39Q9H9C1 493 aa18.59■□□□□ 0.57
PHGDH-211ENST00000641213 AS3MTQ9HBK9 375 aa18.59■□□□□ 0.57
PHGDH-211ENST00000641213 RBM12Q9NTZ6 932 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms