RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 ST6GALNAC4Q9H4F1 302 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 C17orf75Q9HAS0 396 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 ATP6V0A4Q9HBG4 840 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 SETD4Q9NVD3 440 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 TRPC6Q9Y210 931 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 PCDHA5Q9Y5H7 936 aa10.12□□□□□ -0.79
SCARB2-225ENST00000640900 NPHP3-ACAD11A0A0J9YXS1 232 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 A0A0U1RQG5 324 aaPredicted RBP10.11□□□□□ -0.79
SCARB2-225ENST00000640900 SMIM35A0A1B0GVV1 85 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 C17orf102A2RUQ5 167 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 RSPH10B2B2RC85 870 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 KBTBD13C9JR72 458 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 USO1O60763 962 aaKnown RBP10.11□□□□□ -0.79
SCARB2-225ENST00000640900 HIP1RO75146 1068 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 PPP1R37O75864 691 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 CD4P01730 458 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 TFRCP02786 760 aaKnown RBP10.11□□□□□ -0.79
SCARB2-225ENST00000640900 RSPH10BP0C881 870 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 MAPTP10636 758 aaKnown RBP10.11□□□□□ -0.79
SCARB2-225ENST00000640900 GNAT1P11488 350 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 BMP6P22004 513 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 TBC1D8BQ0IIM8 1120 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 TPRNQ4KMQ1 711 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 COBLL1Q53SF7 1204 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 COL13A1Q5TAT6 717 aaPredicted RBP10.11□□□□□ -0.79
SCARB2-225ENST00000640900 IER5Q5VY09 327 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 ANKRD33Q7Z3H0 272 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 ZNF710Q8N1W2 664 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 C7orf31Q8N865 590 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 SPIRE2Q8WWL2 714 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 SLC7A3Q8WY07 619 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 BSNDQ8WZ55 320 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 KIFAP3Q92845 792 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 CCDC34Q96HJ3 373 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 FUCA2Q9BTY2 467 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 NFKBIZQ9BYH8 718 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 BLZF1Q9H2G9 400 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 GPRC5CQ9NQ84 441 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 OLFML3Q9NRN5 406 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 BMP2KQ9NSY1 1161 aaPredicted RBP10.11□□□□□ -0.79
SCARB2-225ENST00000640900 SEL1LQ9UBV2 794 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 HOOK1Q9UJC3 728 aaKnown RBP10.11□□□□□ -0.79
SCARB2-225ENST00000640900 PCDHB8Q9UN66 801 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 EVPLQ92817 2033 aa10.11□□□□□ -0.79
SCARB2-225ENST00000640900 TREHO43280 583 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 MYCP01106 439 aaPredicted RBP10.1□□□□□ -0.79
SCARB2-225ENST00000640900 RPN1P04843 607 aaKnown RBP10.1□□□□□ -0.79
SCARB2-225ENST00000640900 PLS3P13797 630 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 GAP43P17677 238 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 GLRA2P23416 452 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 POLGP54098 1239 aaPredicted RBP10.1□□□□□ -0.79
SCARB2-225ENST00000640900 ZNF200P98182 395 aaPredicted RBP10.1□□□□□ -0.79
SCARB2-225ENST00000640900 COASYQ13057 564 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 MORC3Q14149 939 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 CAMK4Q16566 473 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 CDCA2Q69YH5 1023 aaPredicted RBP10.1□□□□□ -0.79
SCARB2-225ENST00000640900 EFCAB12Q6NXP0 572 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 CAVIN1Q6NZI2 390 aaKnown RBP10.1□□□□□ -0.79
SCARB2-225ENST00000640900 TAF2Q6P1X5 1199 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 RUFY4Q6ZNE9 571 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 EPM2AIP1Q7L775 607 aaPredicted RBP10.1□□□□□ -0.79
SCARB2-225ENST00000640900 FAM126BQ8IXS8 530 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 NME8Q8N427 588 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 TRIML1Q8N9V2 468 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 ASAP3Q8TDY4 903 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 DIS3LQ8TF46 1054 aaKnown RBP10.1□□□□□ -0.79
SCARB2-225ENST00000640900 DHX38Q92620 1227 aaKnown RBP10.1□□□□□ -0.79
SCARB2-225ENST00000640900 TMEM143Q96AN5 459 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 ZBTB10Q96DT7 871 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 DRC1Q96MC2 740 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 TOX2Q96NM4 488 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 TMEM106CQ9BVX2 250 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 PARVGQ9HBI0 331 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 STARD7Q9NQZ5 370 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 MAN1B1Q9UKM7 699 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 COL4A3BPQ9Y5P4 624 aa10.1□□□□□ -0.79
SCARB2-225ENST00000640900 ASAP2O43150 1006 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 GALR2O43603 387 aaPredicted RBP10.09□□□□□ -0.79
SCARB2-225ENST00000640900 B4GALT4O60513 344 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 CAND2O75155 1236 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 GPR32O75388 356 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 SMC2O95347 1197 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 RPLP2P05387 115 aaKnown RBP10.09□□□□□ -0.79
SCARB2-225ENST00000640900 SSBP05455 408 aaKnown RBP eCLIP10.09□□□□□ -0.79
SCARB2-225ENST00000640900 SCP2P22307 547 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 CLCN3P51790 818 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 NCKAP1LP55160 1127 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 SOX10P56693 466 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 ASIC1P78348 528 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 CDC42EP1Q00587 391 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 PSMD2Q13200 908 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 PTK7Q13308 1070 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 DHX8Q14562 1220 aaKnown RBP10.09□□□□□ -0.79
SCARB2-225ENST00000640900 MXD4Q14582 209 aaPredicted RBP10.09□□□□□ -0.79
SCARB2-225ENST00000640900 KMT5BQ4FZB7 885 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 FAM26DQ5JW98 314 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 TRAF7Q6Q0C0 670 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 SLC39A5Q6ZMH5 540 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 DYMQ7RTS9 669 aa10.09□□□□□ -0.79
SCARB2-225ENST00000640900 TRMT1LQ7Z2T5 733 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms