RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 FAM43BQ6ZT52 329 aaPredicted RBP16.17■□□□□ 0.18
HNRNPU-229ENST00000640440 NLRP7Q8WX94 980 aa16.17■□□□□ 0.18
HNRNPU-229ENST00000640440 CEP89Q96ST8 783 aa16.17■□□□□ 0.18
HNRNPU-229ENST00000640440 PLVAPQ9BX97 442 aa16.17■□□□□ 0.18
HNRNPU-229ENST00000640440 NSUN3Q9H649 340 aaKnown RBP16.17■□□□□ 0.18
HNRNPU-229ENST00000640440 TBKBP1A7MCY6 615 aa16.16■□□□□ 0.18
HNRNPU-229ENST00000640440 BTBD18B2RXH4 712 aa16.16■□□□□ 0.18
HNRNPU-229ENST00000640440 MMP1P03956 469 aa16.16■□□□□ 0.18
HNRNPU-229ENST00000640440 DARSP14868 501 aaKnown RBP16.16■□□□□ 0.18
HNRNPU-229ENST00000640440 KCNA5P22460 613 aa16.16■□□□□ 0.18
HNRNPU-229ENST00000640440 QARSP47897 775 aaKnown RBP16.16■□□□□ 0.18
HNRNPU-229ENST00000640440 TRIM29Q14134 588 aa16.16■□□□□ 0.18
HNRNPU-229ENST00000640440 DSC3Q14574 896 aa16.16■□□□□ 0.18
HNRNPU-229ENST00000640440 FAM102BQ5T8I3 360 aa16.16■□□□□ 0.18
HNRNPU-229ENST00000640440 ANO5Q75V66 913 aa16.16■□□□□ 0.18
HNRNPU-229ENST00000640440 DIS3L2Q8IYB7 885 aaKnown RBP16.16■□□□□ 0.18
HNRNPU-229ENST00000640440 ZNF710Q8N1W2 664 aa16.16■□□□□ 0.18
HNRNPU-229ENST00000640440 LMAN2LQ9H0V9 348 aa16.16■□□□□ 0.18
HNRNPU-229ENST00000640440 ALG13Q9NP73 1137 aaKnown RBP16.16■□□□□ 0.18
HNRNPU-229ENST00000640440 IGKV6-21A0A0C4DH24 114 aa16.15■□□□□ 0.18
HNRNPU-229ENST00000640440 FGFR1P11362 822 aa16.15■□□□□ 0.18
HNRNPU-229ENST00000640440 FGFR4P22455 802 aa16.15■□□□□ 0.18
HNRNPU-229ENST00000640440 C8orf34Q49A92 452 aa16.15■□□□□ 0.18
HNRNPU-229ENST00000640440 NCAPH2Q6IBW4 605 aa16.15■□□□□ 0.18
HNRNPU-229ENST00000640440 CCDC83Q8IWF9 413 aa16.15■□□□□ 0.18
HNRNPU-229ENST00000640440 SLFN12Q8IYM2 578 aa16.15■□□□□ 0.18
HNRNPU-229ENST00000640440 LXNQ9BS40 222 aa16.15■□□□□ 0.18
HNRNPU-229ENST00000640440 CYP26B1Q9NR63 512 aa16.15■□□□□ 0.18
HNRNPU-229ENST00000640440 WRAP73Q9P2S5 460 aaPredicted RBP16.15■□□□□ 0.18
HNRNPU-229ENST00000640440 PLAGL2Q9UPG8 496 aa16.15■□□□□ 0.18
HNRNPU-229ENST00000640440 LIMCH1Q9UPQ0 1083 aa16.15■□□□□ 0.18
HNRNPU-229ENST00000640440 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.14■□□□□ 0.17
HNRNPU-229ENST00000640440 DKC1O60832 514 aaKnown RBP eCLIP16.14■□□□□ 0.17
HNRNPU-229ENST00000640440 MAFO75444 373 aaPredicted RBP16.14■□□□□ 0.17
HNRNPU-229ENST00000640440 CSDE1O75534 798 aaKnown RBP16.14■□□□□ 0.17
HNRNPU-229ENST00000640440 BAG4O95429 457 aaKnown RBP16.14■□□□□ 0.17
HNRNPU-229ENST00000640440 ITGB1P05556 798 aa16.14■□□□□ 0.17
HNRNPU-229ENST00000640440 P4HBP07237 508 aaKnown RBP16.14■□□□□ 0.17
HNRNPU-229ENST00000640440 ZSCAN20P17040 1043 aaPredicted RBP16.14■□□□□ 0.17
HNRNPU-229ENST00000640440 DNM2P50570 870 aa16.14■□□□□ 0.17
HNRNPU-229ENST00000640440 NPEPPSP55786 919 aa16.14■□□□□ 0.17
HNRNPU-229ENST00000640440 CYP4A11Q02928 519 aa16.14■□□□□ 0.17
HNRNPU-229ENST00000640440 SPIRE1Q08AE8 756 aa16.14■□□□□ 0.17
HNRNPU-229ENST00000640440 SPOUT1Q5T280 376 aaKnown RBP16.14■□□□□ 0.17
HNRNPU-229ENST00000640440 EP400NLQ6ZTU2 488 aa16.14■□□□□ 0.17
HNRNPU-229ENST00000640440 KLHL23Q8NBE8 558 aa16.14■□□□□ 0.17
HNRNPU-229ENST00000640440 P2RX5Q93086 422 aa16.14■□□□□ 0.17
HNRNPU-229ENST00000640440 GCOM2Q9BZD3 368 aaPredicted RBP16.14■□□□□ 0.17
HNRNPU-229ENST00000640440 ATP6V0A4Q9HBG4 840 aa16.14■□□□□ 0.17
HNRNPU-229ENST00000640440 TMEM161AQ9NX61 479 aa16.14■□□□□ 0.17
HNRNPU-229ENST00000640440 RGL1Q9NZL6 768 aa16.14■□□□□ 0.17
HNRNPU-229ENST00000640440 SUCLA2Q9P2R7 463 aaPredicted RBP16.14■□□□□ 0.17
HNRNPU-229ENST00000640440 HCSTQ9UBK5 93 aa16.14■□□□□ 0.17
HNRNPU-229ENST00000640440 A0A087WZ62 844 aa16.13■□□□□ 0.17
HNRNPU-229ENST00000640440 WNT7AO00755 349 aa16.13■□□□□ 0.17
HNRNPU-229ENST00000640440 FAM189BP81408 668 aa16.13■□□□□ 0.17
HNRNPU-229ENST00000640440 GUCY1B3Q02153 619 aa16.13■□□□□ 0.17
HNRNPU-229ENST00000640440 CAMK1Q14012 370 aa16.13■□□□□ 0.17
HNRNPU-229ENST00000640440 CTTNQ14247 550 aaKnown RBP16.13■□□□□ 0.17
HNRNPU-229ENST00000640440 EPHA7Q15375 998 aa16.13■□□□□ 0.17
HNRNPU-229ENST00000640440 CALCRLQ16602 461 aa16.13■□□□□ 0.17
HNRNPU-229ENST00000640440 LEXMQ3ZCV2 418 aa16.13■□□□□ 0.17
HNRNPU-229ENST00000640440 NAALADL2Q58DX5 795 aa16.13■□□□□ 0.17
HNRNPU-229ENST00000640440 RHPN2Q8IUC4 686 aa16.13■□□□□ 0.17
HNRNPU-229ENST00000640440 RNF169Q8NCN4 708 aa16.13■□□□□ 0.17
HNRNPU-229ENST00000640440 DYDC2Q96IM9 177 aa16.13■□□□□ 0.17
HNRNPU-229ENST00000640440 CEP170P1Q96L14 293 aa16.13■□□□□ 0.17
HNRNPU-229ENST00000640440 NLRP4Q96MN2 994 aa16.13■□□□□ 0.17
HNRNPU-229ENST00000640440 JPH2Q9BR39 696 aaPredicted RBP16.13■□□□□ 0.17
HNRNPU-229ENST00000640440 FDXACB1Q9BRP7 624 aaPredicted RBP16.13■□□□□ 0.17
HNRNPU-229ENST00000640440 ELAC1Q9H777 363 aaKnown RBP16.13■□□□□ 0.17
HNRNPU-229ENST00000640440 C5orf42Q9H799 3197 aa16.13■□□□□ 0.17
HNRNPU-229ENST00000640440 H3BQ06 376 aaPredicted RBP16.12■□□□□ 0.17
HNRNPU-229ENST00000640440 NEMFO60524 1076 aa16.12■□□□□ 0.17
HNRNPU-229ENST00000640440 DNAJB1P25685 340 aa16.12■□□□□ 0.17
HNRNPU-229ENST00000640440 POLGP54098 1239 aaPredicted RBP16.12■□□□□ 0.17
HNRNPU-229ENST00000640440 CDC42EP1Q00587 391 aa16.12■□□□□ 0.17
HNRNPU-229ENST00000640440 ZNF410Q86VK4 478 aa16.12■□□□□ 0.17
HNRNPU-229ENST00000640440 ECHDC2Q86YB7 292 aa16.12■□□□□ 0.17
HNRNPU-229ENST00000640440 KSR1Q8IVT5 923 aa16.12■□□□□ 0.17
HNRNPU-229ENST00000640440 ZNF579Q8NAF0 562 aaKnown RBP16.12■□□□□ 0.17
HNRNPU-229ENST00000640440 SPPL3Q8TCT6 385 aa16.12■□□□□ 0.17
HNRNPU-229ENST00000640440 SLC7A3Q8WY07 619 aa16.12■□□□□ 0.17
HNRNPU-229ENST00000640440 PABPC5Q96DU9 382 aaKnown RBP16.12■□□□□ 0.17
HNRNPU-229ENST00000640440 KIF2CQ99661 725 aa16.12■□□□□ 0.17
HNRNPU-229ENST00000640440 BMP2KQ9NSY1 1161 aaPredicted RBP16.12■□□□□ 0.17
HNRNPU-229ENST00000640440 RNF19AQ9NV58 838 aa16.12■□□□□ 0.17
HNRNPU-229ENST00000640440 CLDND1Q9NY35 253 aa16.12■□□□□ 0.17
HNRNPU-229ENST00000640440 HOXA2O43364 376 aa16.11■□□□□ 0.17
HNRNPU-229ENST00000640440 ATP2B1P20020 1258 aa16.11■□□□□ 0.17
HNRNPU-229ENST00000640440 SFPQP23246 707 aaKnown RBP eCLIP16.11■□□□□ 0.17
HNRNPU-229ENST00000640440 YWHABP31946 246 aaKnown RBP16.11■□□□□ 0.17
HNRNPU-229ENST00000640440 HYAL1Q12794 435 aa16.11■□□□□ 0.17
HNRNPU-229ENST00000640440 COL19A1Q14993 1142 aa16.11■□□□□ 0.17
HNRNPU-229ENST00000640440 SAFBQ15424 915 aaKnown RBP eCLIP16.11■□□□□ 0.17
HNRNPU-229ENST00000640440 TPH2Q8IWU9 490 aa16.11■□□□□ 0.17
HNRNPU-229ENST00000640440 C4orf19Q8IY42 314 aa16.11■□□□□ 0.17
HNRNPU-229ENST00000640440 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.11■□□□□ 0.17
HNRNPU-229ENST00000640440 POF1BQ8WVV4 589 aa16.11■□□□□ 0.17
HNRNPU-229ENST00000640440 TMEM143Q96AN5 459 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms